RNA–Protein interactions for RNA: ENST00000599680.1

IRF3-224, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-224ENST00000599680 EHD4Q9H223 541 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 ARMT1Q9H993 441 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 MCM9Q9NXL9 1143 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 TMOD4Q9NZQ9 345 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 ZBTB21Q9ULJ3 1066 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 PCDHB15Q9Y5E8 787 aa17.3■□□□□ 0.36
IRF3-224ENST00000599680 MBD4O95243 580 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 HOXD10P28358 340 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 PRMT2P55345 433 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 CAP1Q01518 475 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 TREML2Q5T2D2 321 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 NBPF11Q86T75 865 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 AMOTL1Q8IY63 956 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 DDRGK1Q96HY6 314 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 WDR18Q9BV38 432 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 PTCH2Q9Y6C5 1203 aa17.29■□□□□ 0.36
IRF3-224ENST00000599680 OSBPP22059 807 aa17.28■□□□□ 0.36
IRF3-224ENST00000599680 MTMR2Q13614 643 aa17.28■□□□□ 0.36
IRF3-224ENST00000599680 SDR42E1Q8WUS8 393 aa17.28■□□□□ 0.36
IRF3-224ENST00000599680 CABP5Q9NP86 173 aa17.28■□□□□ 0.36
IRF3-224ENST00000599680 TNRC18O15417 2968 aaPredicted RBP17.28■□□□□ 0.36
IRF3-224ENST00000599680 USP17L10C9JJH3 530 aa17.27■□□□□ 0.36
IRF3-224ENST00000599680 GH2P01242 217 aa17.27■□□□□ 0.36
IRF3-224ENST00000599680 BCRP11274 1271 aa17.27■□□□□ 0.36
IRF3-224ENST00000599680 FCGRTP55899 365 aa17.27■□□□□ 0.36
IRF3-224ENST00000599680 BACE1P56817 501 aa17.27■□□□□ 0.36
IRF3-224ENST00000599680 UBE3CQ15386 1083 aa17.27■□□□□ 0.36
IRF3-224ENST00000599680 CERKLQ49MI3 558 aaPredicted RBP17.27■□□□□ 0.36
IRF3-224ENST00000599680 SH3D19Q5HYK7 790 aa17.27■□□□□ 0.36
IRF3-224ENST00000599680 TRIM47Q96LD4 638 aa17.27■□□□□ 0.36
IRF3-224ENST00000599680 DOCK3Q8IZD9 2030 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 C19orf81C9J6K1 198 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 ERC2O15083 957 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 PLCD1P51178 756 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 IRX3P78415 501 aaPredicted RBP17.26■□□□□ 0.35
IRF3-224ENST00000599680 JAG1P78504 1218 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 RAB3GAP1Q15042 981 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 ABCB5Q2M3G0 1257 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 SHROOM1Q2M3G4 852 aaPredicted RBP17.26■□□□□ 0.35
IRF3-224ENST00000599680 TSHZ3Q63HK5 1081 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 TATDN1Q6P1N9 297 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 FEZ1Q99689 392 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 DCP1AQ9NPI6 582 aaPredicted RBP17.26■□□□□ 0.35
IRF3-224ENST00000599680 ATP8A2Q9NTI2 1148 aa17.26■□□□□ 0.35
IRF3-224ENST00000599680 TTC41PQ6P2S7 1318 aa17.25■□□□□ 0.35
IRF3-224ENST00000599680 MYPNQ86TC9 1320 aa17.25■□□□□ 0.35
IRF3-224ENST00000599680 HTTP42858 3142 aa17.25■□□□□ 0.35
IRF3-224ENST00000599680 MPHOSPH10O00566 681 aaKnown RBP17.25■□□□□ 0.35
IRF3-224ENST00000599680 GCLCP48506 637 aaPredicted RBP17.25■□□□□ 0.35
IRF3-224ENST00000599680 LRRFIP1Q32MZ4 808 aaKnown RBP17.25■□□□□ 0.35
IRF3-224ENST00000599680 SLFNL1Q499Z3 407 aa17.25■□□□□ 0.35
IRF3-224ENST00000599680 RAET1EQ8TD07 263 aa17.25■□□□□ 0.35
IRF3-224ENST00000599680 ARMC5Q96C12 935 aa17.25■□□□□ 0.35
IRF3-224ENST00000599680 TMEM106CQ9BVX2 250 aa17.25■□□□□ 0.35
IRF3-224ENST00000599680 SRRDQ9UH36 339 aa17.25■□□□□ 0.35
IRF3-224ENST00000599680 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
IRF3-224ENST00000599680 USP17L2Q6R6M4 530 aa17.24■□□□□ 0.35
IRF3-224ENST00000599680 ANKRD13CQ8N6S4 541 aa17.24■□□□□ 0.35
IRF3-224ENST00000599680 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
IRF3-224ENST00000599680 ASCC2Q9H1I8 757 aaPredicted RBP17.24■□□□□ 0.35
IRF3-224ENST00000599680 SLC4A4Q9Y6R1 1079 aa17.24■□□□□ 0.35
IRF3-224ENST00000599680 PDE4DIPQ5VU43 2346 aa17.23■□□□□ 0.35
IRF3-224ENST00000599680 TNPO2O14787 897 aaKnown RBP17.23■□□□□ 0.35
IRF3-224ENST00000599680 PRKAB2O43741 272 aa17.23■□□□□ 0.35
IRF3-224ENST00000599680 CTGFP29279 349 aa17.23■□□□□ 0.35
IRF3-224ENST00000599680 SHMT1P34896 483 aa17.23■□□□□ 0.35
IRF3-224ENST00000599680 AAMPQ13685 434 aa17.23■□□□□ 0.35
IRF3-224ENST00000599680 ZYXQ15942 572 aaKnown RBP17.23■□□□□ 0.35
IRF3-224ENST00000599680 SH3TC2Q8TF17 1288 aa17.23■□□□□ 0.35
IRF3-224ENST00000599680 ZNF333Q96JL9 665 aa17.23■□□□□ 0.35
IRF3-224ENST00000599680 SWAP70Q9UH65 585 aa17.23■□□□□ 0.35
IRF3-224ENST00000599680 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
IRF3-224ENST00000599680 CHGBP05060 677 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 ZFYP08048 801 aaPredicted RBP17.22■□□□□ 0.35
IRF3-224ENST00000599680 CYP2D6P10635 497 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 MX1P20591 662 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 USP14P54578 494 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 FAM110CQ1W6H9 321 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 ANKRD45Q5TZF3 282 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 COA7Q96BR5 231 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 GCC1Q96CN9 775 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 PUS7LQ9H0K6 701 aaKnown RBP17.22■□□□□ 0.35
IRF3-224ENST00000599680 BIN2Q9UBW5 565 aaPredicted RBP17.22■□□□□ 0.35
IRF3-224ENST00000599680 TAOK2Q9UL54 1235 aa17.22■□□□□ 0.35
IRF3-224ENST00000599680 RNF113AO15541 343 aaKnown RBP17.21■□□□□ 0.35
IRF3-224ENST00000599680 MYCP01106 439 aaPredicted RBP17.21■□□□□ 0.35
IRF3-224ENST00000599680 GABPAQ06546 454 aa17.21■□□□□ 0.35
IRF3-224ENST00000599680 MYH4Q9Y623 1939 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 USP17L12C9JPN9 530 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 USP17L21D6R901 530 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 HOXA7P31268 230 aaPredicted RBP17.2■□□□□ 0.34
IRF3-224ENST00000599680 GRK4P32298 578 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 EVX2Q03828 476 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 PRKCZQ05513 592 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 HDAC1Q13547 482 aaPredicted RBP17.2■□□□□ 0.34
IRF3-224ENST00000599680 APPBP2Q92624 585 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 DYNLL2Q96FJ2 89 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 FSD1Q9BTV5 496 aa17.2■□□□□ 0.34
IRF3-224ENST00000599680 POTEFA5A3E0 1075 aa17.19■□□□□ 0.34
IRF3-224ENST00000599680 HERVK_113P62684 666 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms