RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 FLT3LGP49771 235 aa22.78■■□□□ 1.24
PNKP-213ENST00000599543 RPAP2Q8IXW5 612 aaPredicted RBP22.78■■□□□ 1.24
PNKP-213ENST00000599543 CLASRPQ8N2M8 674 aaKnown RBP22.78■■□□□ 1.24
PNKP-213ENST00000599543 WDR18Q9BV38 432 aa22.78■■□□□ 1.24
PNKP-213ENST00000599543 GINM1Q9NU53 330 aa22.78■■□□□ 1.24
PNKP-213ENST00000599543 TMOD4Q9NZQ9 345 aa22.78■■□□□ 1.24
PNKP-213ENST00000599543 NAV1Q8NEY1 1877 aa22.77■■□□□ 1.24
PNKP-213ENST00000599543 ADCY3O60266 1144 aa22.77■■□□□ 1.24
PNKP-213ENST00000599543 CCL5P13501 91 aa22.77■■□□□ 1.24
PNKP-213ENST00000599543 BACE1P56817 501 aa22.77■■□□□ 1.24
PNKP-213ENST00000599543 TTF1Q15361 905 aaPredicted RBP22.77■■□□□ 1.24
PNKP-213ENST00000599543 COA7Q96BR5 231 aa22.77■■□□□ 1.24
PNKP-213ENST00000599543 KIF1BPQ96EK5 621 aa22.77■■□□□ 1.24
PNKP-213ENST00000599543 RNF208Q9H0X6 261 aa22.77■■□□□ 1.24
PNKP-213ENST00000599543 ASCC2Q9H1I8 757 aaPredicted RBP22.77■■□□□ 1.24
PNKP-213ENST00000599543 ZBTB21Q9ULJ3 1066 aa22.77■■□□□ 1.24
PNKP-213ENST00000599543 RRP1P56182 461 aaKnown RBP22.76■■□□□ 1.23
PNKP-213ENST00000599543 CHMP4BQ9H444 224 aaKnown RBP22.76■■□□□ 1.23
PNKP-213ENST00000599543 DDX60LQ5H9U9 1706 aaKnown RBP22.76■■□□□ 1.23
PNKP-213ENST00000599543 GJB1P08034 283 aa22.75■■□□□ 1.23
PNKP-213ENST00000599543 IRX3P78415 501 aaPredicted RBP22.75■■□□□ 1.23
PNKP-213ENST00000599543 IRF5Q13568 498 aa22.75■■□□□ 1.23
PNKP-213ENST00000599543 SHROOM1Q2M3G4 852 aaPredicted RBP22.75■■□□□ 1.23
PNKP-213ENST00000599543 SHISA4Q96DD7 197 aa22.75■■□□□ 1.23
PNKP-213ENST00000599543 BCL11AQ9H165 835 aa22.75■■□□□ 1.23
PNKP-213ENST00000599543 ZBTB40Q9NUA8 1239 aa22.75■■□□□ 1.23
PNKP-213ENST00000599543 TAOK2Q9UL54 1235 aa22.75■■□□□ 1.23
PNKP-213ENST00000599543 C19orf81C9J6K1 198 aa22.74■■□□□ 1.23
PNKP-213ENST00000599543 USP17L10C9JJH3 530 aa22.74■■□□□ 1.23
PNKP-213ENST00000599543 IFIT2P09913 472 aaKnown RBP22.74■■□□□ 1.23
PNKP-213ENST00000599543 ELNP15502 786 aa22.74■■□□□ 1.23
PNKP-213ENST00000599543 GJA8P48165 433 aa22.74■■□□□ 1.23
PNKP-213ENST00000599543 JAG1P78504 1218 aa22.74■■□□□ 1.23
PNKP-213ENST00000599543 PXYLP1Q8TE99 480 aa22.74■■□□□ 1.23
PNKP-213ENST00000599543 EHD4Q9H223 541 aa22.73■■□□□ 1.23
PNKP-213ENST00000599543 SERPINB13Q9UIV8 391 aa22.73■■□□□ 1.23
PNKP-213ENST00000599543 MAGEB6P1A0A0J9YX57 407 aa22.72■■□□□ 1.23
PNKP-213ENST00000599543 RAB11FIP3O75154 756 aa22.72■■□□□ 1.23
PNKP-213ENST00000599543 INHAP05111 366 aa22.72■■□□□ 1.23
PNKP-213ENST00000599543 SLC9C2Q5TAH2 1124 aa22.72■■□□□ 1.23
PNKP-213ENST00000599543 TTC6Q86TZ1 520 aa22.72■■□□□ 1.23
PNKP-213ENST00000599543 SIRT2Q8IXJ6 389 aa22.72■■□□□ 1.23
PNKP-213ENST00000599543 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.72■■□□□ 1.23
PNKP-213ENST00000599543 DNAJC2Q99543 621 aaKnown RBP22.72■■□□□ 1.23
PNKP-213ENST00000599543 UNC93B1Q9H1C4 597 aa22.72■■□□□ 1.23
PNKP-213ENST00000599543 GH2P01242 217 aa22.71■■□□□ 1.23
PNKP-213ENST00000599543 HOXA7P31268 230 aaPredicted RBP22.71■■□□□ 1.23
PNKP-213ENST00000599543 PDE3AQ14432 1141 aa22.71■■□□□ 1.23
PNKP-213ENST00000599543 U2AF1L4Q8WU68 220 aaKnown RBP22.71■■□□□ 1.23
PNKP-213ENST00000599543 RIOK1Q9BRS2 568 aaKnown RBP22.71■■□□□ 1.23
PNKP-213ENST00000599543 GOLIM4O00461 696 aa22.7■■□□□ 1.22
PNKP-213ENST00000599543 PDE6AP16499 860 aa22.7■■□□□ 1.22
PNKP-213ENST00000599543 TATDN1Q6P1N9 297 aa22.7■■□□□ 1.22
PNKP-213ENST00000599543 FEZ1Q99689 392 aa22.7■■□□□ 1.22
PNKP-213ENST00000599543 MYH7P12883 1935 aa22.7■■□□□ 1.22
PNKP-213ENST00000599543 MYH8P13535 1937 aa22.7■■□□□ 1.22
PNKP-213ENST00000599543 PLXNB2O15031 1838 aa22.69■■□□□ 1.22
PNKP-213ENST00000599543 CRNKL1Q9BZJ0 848 aaKnown RBP22.69■■□□□ 1.22
PNKP-213ENST00000599543 MORF4L1Q9UBU8 362 aa22.69■■□□□ 1.22
PNKP-213ENST00000599543 ZNF532Q9HCE3 1301 aa22.68■■□□□ 1.22
PNKP-213ENST00000599543 POLR3DP05423 398 aaPredicted RBP22.68■■□□□ 1.22
PNKP-213ENST00000599543 HERVK_113P62684 666 aa22.68■■□□□ 1.22
PNKP-213ENST00000599543 RAB3GAP1Q15042 981 aa22.68■■□□□ 1.22
PNKP-213ENST00000599543 CERKLQ49MI3 558 aaPredicted RBP22.68■■□□□ 1.22
PNKP-213ENST00000599543 USP17L2Q6R6M4 530 aa22.68■■□□□ 1.22
PNKP-213ENST00000599543 P2RX7Q99572 595 aaKnown RBP22.68■■□□□ 1.22
PNKP-213ENST00000599543 ABCB5Q2M3G0 1257 aa22.67■■□□□ 1.22
PNKP-213ENST00000599543 HABP4Q5JVS0 413 aaKnown RBP22.67■■□□□ 1.22
PNKP-213ENST00000599543 GPRC5AQ8NFJ5 357 aa22.67■■□□□ 1.22
PNKP-213ENST00000599543 EMILIN3Q9NT22 766 aa22.67■■□□□ 1.22
PNKP-213ENST00000599543 SGPL1O95470 568 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 HMGCRP04035 888 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 PLCD1P51178 756 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 ZYXQ15942 572 aaKnown RBP22.66■■□□□ 1.22
PNKP-213ENST00000599543 GTF3C2Q8WUA4 911 aaPredicted RBP22.66■■□□□ 1.22
PNKP-213ENST00000599543 DPF3Q92784 378 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 DEFB118Q96PH6 123 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 CRBNQ96SW2 442 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 HTATIP2Q9BUP3 242 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 CABP5Q9NP86 173 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 PAG1Q9NWQ8 432 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 MCM9Q9NXL9 1143 aa22.66■■□□□ 1.22
PNKP-213ENST00000599543 SUPT16HQ9Y5B9 1047 aaKnown RBP22.66■■□□□ 1.22
PNKP-213ENST00000599543 BAZ2AQ9UIF9 1905 aaKnown RBP22.65■■□□□ 1.22
PNKP-213ENST00000599543 FARP2O94887 1054 aaPredicted RBP22.65■■□□□ 1.22
PNKP-213ENST00000599543 USP14P54578 494 aa22.65■■□□□ 1.22
PNKP-213ENST00000599543 UBE2Q1Q7Z7E8 422 aa22.65■■□□□ 1.22
PNKP-213ENST00000599543 EDC3Q96F86 508 aaKnown RBP22.65■■□□□ 1.22
PNKP-213ENST00000599543 TXNRD2Q9NNW7 524 aa22.65■■□□□ 1.22
PNKP-213ENST00000599543 PAK6Q9NQU5 681 aaPredicted RBP22.65■■□□□ 1.22
PNKP-213ENST00000599543 TCRBV5S4A2TA0A5A2 114 aa22.64■■□□□ 1.21
PNKP-213ENST00000599543 H0YGN5 161 aa22.64■■□□□ 1.21
PNKP-213ENST00000599543 TFRCP02786 760 aaKnown RBP22.64■■□□□ 1.21
PNKP-213ENST00000599543 SHMT1P34896 483 aa22.64■■□□□ 1.21
PNKP-213ENST00000599543 CCAR1Q8IX12 1150 aaKnown RBP22.64■■□□□ 1.21
PNKP-213ENST00000599543 SDR42E1Q8WUS8 393 aa22.64■■□□□ 1.21
PNKP-213ENST00000599543 C12orf42Q96LP6 360 aa22.64■■□□□ 1.21
PNKP-213ENST00000599543 PAGR1Q9BTK6 254 aa22.64■■□□□ 1.21
PNKP-213ENST00000599543 BOLA2Q9H3K6 86 aa22.64■■□□□ 1.21
PNKP-213ENST00000599543 GJD2Q9UKL4 321 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 478.8 ms