RNA–Protein interactions for RNA: ENST00000596824.1

SYMPK-207, Transcript of symplekin, humanhuman

TSL 3

Gene SYMPK, Length 653 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-207ENST00000596824 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
SYMPK-207ENST00000596824 CRNKL1Q9BZJ0 848 aaKnown RBP14.12□□□□□ -0.15
SYMPK-207ENST00000596824 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.12□□□□□ -0.15
SYMPK-207ENST00000596824 ECHDC1Q9NTX5 307 aa14.12□□□□□ -0.15
SYMPK-207ENST00000596824 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
SYMPK-207ENST00000596824 SERPINB13Q9UIV8 391 aa14.12□□□□□ -0.15
SYMPK-207ENST00000596824 ZBTB21Q9ULJ3 1066 aa14.12□□□□□ -0.15
SYMPK-207ENST00000596824 PTCH2Q9Y6C5 1203 aa14.12□□□□□ -0.15
SYMPK-207ENST00000596824 COL11A1P12107 1806 aaPredicted RBP14.12□□□□□ -0.15
SYMPK-207ENST00000596824 CENPFP49454 3210 aa14.12□□□□□ -0.15
SYMPK-207ENST00000596824 A0A0G2JMZ2 1700 aa14.11□□□□□ -0.15
SYMPK-207ENST00000596824 GNRH1P01148 92 aa14.11□□□□□ -0.15
SYMPK-207ENST00000596824 CHGBP05060 677 aa14.11□□□□□ -0.15
SYMPK-207ENST00000596824 SH3D19Q5HYK7 790 aa14.11□□□□□ -0.15
SYMPK-207ENST00000596824 TATDN1Q6P1N9 297 aa14.11□□□□□ -0.15
SYMPK-207ENST00000596824 TTC6Q86TZ1 520 aa14.11□□□□□ -0.15
SYMPK-207ENST00000596824 ARMC5Q96C12 935 aa14.11□□□□□ -0.15
SYMPK-207ENST00000596824 ARMT1Q9H993 441 aa14.11□□□□□ -0.15
SYMPK-207ENST00000596824 ECM2O94769 699 aaPredicted RBP14.1□□□□□ -0.15
SYMPK-207ENST00000596824 MBD4O95243 580 aa14.1□□□□□ -0.15
SYMPK-207ENST00000596824 PSMC4P43686 418 aa14.1□□□□□ -0.15
SYMPK-207ENST00000596824 PLCD1P51178 756 aa14.1□□□□□ -0.15
SYMPK-207ENST00000596824 MTMR2Q13614 643 aa14.1□□□□□ -0.15
SYMPK-207ENST00000596824 UBE3CQ15386 1083 aa14.1□□□□□ -0.15
SYMPK-207ENST00000596824 SDR42E1Q8WUS8 393 aa14.1□□□□□ -0.15
SYMPK-207ENST00000596824 TRIM47Q96LD4 638 aa14.1□□□□□ -0.15
SYMPK-207ENST00000596824 DCP1AQ9NPI6 582 aaPredicted RBP14.1□□□□□ -0.15
SYMPK-207ENST00000596824 PDE4DIPQ5VU43 2346 aa14.1□□□□□ -0.15
SYMPK-207ENST00000596824 OSBPP22059 807 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 SHMT1P34896 483 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 PRMT2P55345 433 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 BACE1P56817 501 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 EVX2Q03828 476 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 GABPAQ06546 454 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 TSHZ3Q63HK5 1081 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 SMCR8Q8TEV9 937 aaPredicted RBP14.09□□□□□ -0.15
SYMPK-207ENST00000596824 GPATCH3Q96I76 525 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 MCM9Q9NXL9 1143 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 PNMA3Q9UL41 463 aa14.09□□□□□ -0.15
SYMPK-207ENST00000596824 FRMPD3Q5JV73 1810 aa14.08□□□□□ -0.15
SYMPK-207ENST00000596824 ZNFX1Q9P2E3 1918 aaKnown RBP14.08□□□□□ -0.16
SYMPK-207ENST00000596824 C19orf81C9J6K1 198 aa14.08□□□□□ -0.16
SYMPK-207ENST00000596824 PRKAB2O43741 272 aa14.08□□□□□ -0.16
SYMPK-207ENST00000596824 GH2P01242 217 aa14.08□□□□□ -0.16
SYMPK-207ENST00000596824 POLR3DP05423 398 aaPredicted RBP14.08□□□□□ -0.16
SYMPK-207ENST00000596824 SLC9C1Q4G0N8 1177 aa14.08□□□□□ -0.16
SYMPK-207ENST00000596824 ZSCAN25Q6NSZ9 544 aa14.08□□□□□ -0.16
SYMPK-207ENST00000596824 ZNF333Q96JL9 665 aa14.08□□□□□ -0.16
SYMPK-207ENST00000596824 SRRDQ9UH36 339 aa14.08□□□□□ -0.16
SYMPK-207ENST00000596824 USP17L10C9JJH3 530 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 FMNL1O95466 1100 aaPredicted RBP14.07□□□□□ -0.16
SYMPK-207ENST00000596824 CYP2D6P10635 497 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 FCGRTP55899 365 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 PABPC4Q13310 644 aaKnown RBP eCLIP14.07□□□□□ -0.16
SYMPK-207ENST00000596824 CERKLQ49MI3 558 aaPredicted RBP14.07□□□□□ -0.16
SYMPK-207ENST00000596824 ANKRD13CQ8N6S4 541 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 KBTBD3Q8NAB2 608 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 OTUD7AQ8TE49 926 aaPredicted RBP14.07□□□□□ -0.16
SYMPK-207ENST00000596824 PUS7LQ9H0K6 701 aaKnown RBP14.07□□□□□ -0.16
SYMPK-207ENST00000596824 ASCC2Q9H1I8 757 aaPredicted RBP14.07□□□□□ -0.16
SYMPK-207ENST00000596824 ATP8A2Q9NTI2 1148 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 TMOD4Q9NZQ9 345 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 TTC41PQ6P2S7 1318 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 MYPNQ86TC9 1320 aa14.07□□□□□ -0.16
SYMPK-207ENST00000596824 POTEFA5A3E0 1075 aa14.06□□□□□ -0.16
SYMPK-207ENST00000596824 HOXD10P28358 340 aa14.06□□□□□ -0.16
SYMPK-207ENST00000596824 HOXA7P31268 230 aaPredicted RBP14.06□□□□□ -0.16
SYMPK-207ENST00000596824 GUCY1A2P33402 732 aa14.06□□□□□ -0.16
SYMPK-207ENST00000596824 FAM110CQ1W6H9 321 aa14.06□□□□□ -0.16
SYMPK-207ENST00000596824 ABCB5Q2M3G0 1257 aa14.06□□□□□ -0.16
SYMPK-207ENST00000596824 PI4K2BQ8TCG2 481 aa14.06□□□□□ -0.16
SYMPK-207ENST00000596824 EMILIN3Q9NT22 766 aa14.06□□□□□ -0.16
SYMPK-207ENST00000596824 SALL3Q9BXA9 1300 aa14.06□□□□□ -0.16
SYMPK-207ENST00000596824 GCLCP48506 637 aaPredicted RBP14.05□□□□□ -0.16
SYMPK-207ENST00000596824 PRKCZQ05513 592 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 HDAC1Q13547 482 aaPredicted RBP14.05□□□□□ -0.16
SYMPK-207ENST00000596824 RAB3GAP1Q15042 981 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 USP17L2Q6R6M4 530 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 NBPF11Q86T75 865 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 SLC44A5Q8NCS7 719 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 SH3TC2Q8TF17 1288 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 C12orf42Q96LP6 360 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 TAOK2Q9UL54 1235 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 GABRQQ9UN88 632 aa14.05□□□□□ -0.16
SYMPK-207ENST00000596824 PLXNA1Q9UIW2 1896 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 SMIM22K7EJ46 135 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 RNF113AO15541 343 aaKnown RBP14.04□□□□□ -0.16
SYMPK-207ENST00000596824 MX1P20591 662 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 IRX3P78415 501 aaPredicted RBP14.04□□□□□ -0.16
SYMPK-207ENST00000596824 RAET1EQ8TD07 263 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 APPBP2Q92624 585 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 CABP5Q9NP86 173 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 SWAP70Q9UH65 585 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 SLC4A4Q9Y6R1 1079 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 LAMA4Q16363 1823 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 ZNF236Q9UL36 1845 aa14.04□□□□□ -0.16
SYMPK-207ENST00000596824 BRCA2P51587 3418 aa14.03□□□□□ -0.16
SYMPK-207ENST00000596824 CYP2D7A0A087X1C5 515 aa14.03□□□□□ -0.16
SYMPK-207ENST00000596824 TNPO2O14787 897 aaKnown RBP14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms