RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 PDHXO00330 501 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 GDF11O95390 407 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 SHMT1P34896 483 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 SPP2Q13103 211 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 DGKZQ13574 1117 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 CTU1Q7Z7A3 348 aaKnown RBP25.36■■□□□ 1.65
PNKP-209ENST00000596726 FSD1Q9BTV5 496 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 WDR18Q9BV38 432 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 MCOLN1Q9GZU1 580 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 ZBTB21Q9ULJ3 1066 aa25.36■■□□□ 1.65
PNKP-209ENST00000596726 CYP2D6P10635 497 aa25.35■■□□□ 1.65
PNKP-209ENST00000596726 EVI5LQ96CN4 794 aa25.35■■□□□ 1.65
PNKP-209ENST00000596726 OSBPL3Q9H4L5 887 aa25.35■■□□□ 1.65
PNKP-209ENST00000596726 AS3MTQ9HBK9 375 aa25.35■■□□□ 1.65
PNKP-209ENST00000596726 TAOK2Q9UL54 1235 aa25.35■■□□□ 1.65
PNKP-209ENST00000596726 LOC285556D6RIA3 1793 aa25.35■■□□□ 1.65
PNKP-209ENST00000596726 MYH8P13535 1937 aa25.34■■□□□ 1.65
PNKP-209ENST00000596726 TLR2O60603 784 aa25.34■■□□□ 1.65
PNKP-209ENST00000596726 C12orf60Q5U649 245 aa25.34■■□□□ 1.65
PNKP-209ENST00000596726 PLEKHM2Q8IWE5 1019 aa25.34■■□□□ 1.65
PNKP-209ENST00000596726 GSG1L2A8MUP6 293 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 USP17L12C9JPN9 530 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 USP17L21D6R901 530 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 M0R2C6 588 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 GPAA1O43292 621 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 SP3Q02447 781 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 CERKLQ49MI3 558 aaPredicted RBP25.33■■□□□ 1.65
PNKP-209ENST00000596726 SH3D19Q5HYK7 790 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 ZMYM1Q5SVZ6 1142 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 SLC45A1Q9Y2W3 748 aa25.33■■□□□ 1.65
PNKP-209ENST00000596726 GH2P01242 217 aa25.32■■□□□ 1.64
PNKP-209ENST00000596726 GIMAP6Q6P9H5 292 aa25.32■■□□□ 1.64
PNKP-209ENST00000596726 GADL1Q6ZQY3 521 aa25.32■■□□□ 1.64
PNKP-209ENST00000596726 PROCA1Q8NCQ7 364 aaPredicted RBP25.32■■□□□ 1.64
PNKP-209ENST00000596726 DDRGK1Q96HY6 314 aa25.32■■□□□ 1.64
PNKP-209ENST00000596726 ABHD8Q96I13 439 aa25.32■■□□□ 1.64
PNKP-209ENST00000596726 SEC62Q99442 399 aaKnown RBP25.32■■□□□ 1.64
PNKP-209ENST00000596726 ADGRA2Q96PE1 1338 aa25.32■■□□□ 1.64
PNKP-209ENST00000596726 CTR9Q6PD62 1173 aa25.31■■□□□ 1.64
PNKP-209ENST00000596726 TICAM2Q86XR7 235 aa25.31■■□□□ 1.64
PNKP-209ENST00000596726 ERO1AQ96HE7 468 aa25.31■■□□□ 1.64
PNKP-209ENST00000596726 SWAP70Q9UH65 585 aa25.31■■□□□ 1.64
PNKP-209ENST00000596726 AGTPBP1Q9UPW5 1226 aa25.31■■□□□ 1.64
PNKP-209ENST00000596726 CYP2D7A0A087X1C5 515 aa25.3■■□□□ 1.64
PNKP-209ENST00000596726 SMIM22K7EJ46 135 aa25.3■■□□□ 1.64
PNKP-209ENST00000596726 GNAT2P19087 354 aa25.3■■□□□ 1.64
PNKP-209ENST00000596726 ABCB5Q2M3G0 1257 aa25.3■■□□□ 1.64
PNKP-209ENST00000596726 SBK1Q52WX2 424 aa25.3■■□□□ 1.64
PNKP-209ENST00000596726 C17orf99Q6UX52 265 aa25.3■■□□□ 1.64
PNKP-209ENST00000596726 DYNLL2Q96FJ2 89 aa25.3■■□□□ 1.64
PNKP-209ENST00000596726 HMGCS2P54868 508 aa25.29■■□□□ 1.64
PNKP-209ENST00000596726 BACE1P56817 501 aa25.29■■□□□ 1.64
PNKP-209ENST00000596726 CAP1Q01518 475 aa25.29■■□□□ 1.64
PNKP-209ENST00000596726 PKN2Q16513 984 aaKnown RBP25.29■■□□□ 1.64
PNKP-209ENST00000596726 AMOTL1Q8IY63 956 aa25.29■■□□□ 1.64
PNKP-209ENST00000596726 SLC44A5Q8NCS7 719 aa25.29■■□□□ 1.64
PNKP-209ENST00000596726 CD99L2Q8TCZ2 262 aa25.29■■□□□ 1.64
PNKP-209ENST00000596726 PARK7Q99497 189 aaKnown RBP25.29■■□□□ 1.64
PNKP-209ENST00000596726 ARPP21Q9UBL0 812 aaPredicted RBP25.29■■□□□ 1.64
PNKP-209ENST00000596726 C19orf81C9J6K1 198 aa25.28■■□□□ 1.64
PNKP-209ENST00000596726 PATL2C9JE40 543 aaKnown RBP25.28■■□□□ 1.64
PNKP-209ENST00000596726 GUCY1A2P33402 732 aa25.28■■□□□ 1.64
PNKP-209ENST00000596726 MTMR2Q13614 643 aa25.28■■□□□ 1.64
PNKP-209ENST00000596726 TREML2Q5T2D2 321 aa25.28■■□□□ 1.64
PNKP-209ENST00000596726 C16orf86Q6ZW13 317 aa25.28■■□□□ 1.64
PNKP-209ENST00000596726 EPB41L4AQ9HCS5 686 aaPredicted RBP25.28■■□□□ 1.64
PNKP-209ENST00000596726 CABP5Q9NP86 173 aa25.28■■□□□ 1.64
PNKP-209ENST00000596726 USP17L10C9JJH3 530 aa25.27■■□□□ 1.64
PNKP-209ENST00000596726 CYP2C8P10632 490 aa25.27■■□□□ 1.64
PNKP-209ENST00000596726 PDE4AP27815 886 aa25.26■■□□□ 1.63
PNKP-209ENST00000596726 CDK8P49336 464 aa25.26■■□□□ 1.63
PNKP-209ENST00000596726 OTOP1Q7RTM1 612 aa25.26■■□□□ 1.63
PNKP-209ENST00000596726 CPA4Q9UI42 421 aa25.26■■□□□ 1.63
PNKP-209ENST00000596726 TRIM6-TRIM34B2RNG4 842 aa25.25■■□□□ 1.63
PNKP-209ENST00000596726 BCRP11274 1271 aa25.25■■□□□ 1.63
PNKP-209ENST00000596726 RAB3GAP1Q15042 981 aa25.25■■□□□ 1.63
PNKP-209ENST00000596726 TRIM17Q9Y577 477 aa25.25■■□□□ 1.63
PNKP-209ENST00000596726 ZSWIM8A7E2V4 1837 aa25.24■■□□□ 1.63
PNKP-209ENST00000596726 SEPT2Q15019 361 aa25.24■■□□□ 1.63
PNKP-209ENST00000596726 FBXO46Q6PJ61 603 aaPredicted RBP25.24■■□□□ 1.63
PNKP-209ENST00000596726 IFNL3Q8IZI9 196 aa25.24■■□□□ 1.63
PNKP-209ENST00000596726 CCDC17Q96LX7 622 aa25.24■■□□□ 1.63
PNKP-209ENST00000596726 HELLSQ9NRZ9 838 aa25.24■■□□□ 1.63
PNKP-209ENST00000596726 TMOD4Q9NZQ9 345 aa25.24■■□□□ 1.63
PNKP-209ENST00000596726 ROBO3Q96MS0 1386 aa25.23■■□□□ 1.63
PNKP-209ENST00000596726 LACTBP83111 547 aaPredicted RBP25.23■■□□□ 1.63
PNKP-209ENST00000596726 PABPC4Q13310 644 aaKnown RBP eCLIP25.23■■□□□ 1.63
PNKP-209ENST00000596726 USP17L2Q6R6M4 530 aa25.23■■□□□ 1.63
PNKP-209ENST00000596726 RILPL2Q969X0 211 aa25.23■■□□□ 1.63
PNKP-209ENST00000596726 EFCC1Q9HA90 598 aa25.23■■□□□ 1.63
PNKP-209ENST00000596726 EMILIN3Q9NT22 766 aa25.23■■□□□ 1.63
PNKP-209ENST00000596726 PNMA3Q9UL41 463 aa25.23■■□□□ 1.63
PNKP-209ENST00000596726 FOXP2O15409 715 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 APPP05067 770 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 AKR1B1P15121 316 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 HOXA7P31268 230 aaPredicted RBP25.22■■□□□ 1.63
PNKP-209ENST00000596726 TDO2P48775 406 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 CCDC129Q6ZRS4 1044 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 TMEM179Q6ZVK1 233 aa25.22■■□□□ 1.63
PNKP-209ENST00000596726 ACER1Q8TDN7 264 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms