RNA–Protein interactions for RNA: ENST00000595786.5

ZNF558-203, Transcript of zinc finger protein 558, humanhuman

TSL 3

Gene ZNF558, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-203ENST00000595786 BCL11AQ9H165 835 aa30.74■■■□□ 2.51
ZNF558-203ENST00000595786 ZBTB21Q9ULJ3 1066 aa30.74■■■□□ 2.51
ZNF558-203ENST00000595786 JAG1P78504 1218 aa30.73■■■□□ 2.51
ZNF558-203ENST00000595786 TAOK2Q9UL54 1235 aa30.73■■■□□ 2.51
ZNF558-203ENST00000595786 LOC285556D6RIA3 1793 aa30.73■■■□□ 2.51
ZNF558-203ENST00000595786 ZSWIM8A7E2V4 1837 aa30.73■■■□□ 2.51
ZNF558-203ENST00000595786 RBBP6Q7Z6E9 1792 aaKnown RBP30.72■■■□□ 2.51
ZNF558-203ENST00000595786 ADD2P35612 726 aa30.72■■■□□ 2.51
ZNF558-203ENST00000595786 GCLCP48506 637 aaPredicted RBP30.72■■■□□ 2.51
ZNF558-203ENST00000595786 TMOD4Q9NZQ9 345 aa30.72■■■□□ 2.51
ZNF558-203ENST00000595786 POTEFA5A3E0 1075 aa30.71■■■□□ 2.51
ZNF558-203ENST00000595786 USP17L10C9JJH3 530 aa30.71■■■□□ 2.51
ZNF558-203ENST00000595786 GDF11O95390 407 aa30.71■■■□□ 2.51
ZNF558-203ENST00000595786 EDC3Q96F86 508 aaKnown RBP30.71■■■□□ 2.51
ZNF558-203ENST00000595786 HOXA7P31268 230 aaPredicted RBP30.7■■■□□ 2.51
ZNF558-203ENST00000595786 MTMR2Q13614 643 aa30.7■■■□□ 2.51
ZNF558-203ENST00000595786 FAM110CQ1W6H9 321 aa30.7■■■□□ 2.51
ZNF558-203ENST00000595786 RAET1EQ8TD07 263 aa30.7■■■□□ 2.51
ZNF558-203ENST00000595786 ECHDC1Q9NTX5 307 aa30.7■■■□□ 2.51
ZNF558-203ENST00000595786 MYPNQ86TC9 1320 aa30.7■■■□□ 2.5
ZNF558-203ENST00000595786 SMARCA5O60264 1052 aaPredicted RBP30.69■■■□□ 2.5
ZNF558-203ENST00000595786 POLR3DP05423 398 aaPredicted RBP30.69■■■□□ 2.5
ZNF558-203ENST00000595786 UBE3CQ15386 1083 aa30.69■■■□□ 2.5
ZNF558-203ENST00000595786 ZSCAN25Q6NSZ9 544 aa30.69■■■□□ 2.5
ZNF558-203ENST00000595786 ASCC2Q9H1I8 757 aaPredicted RBP30.69■■■□□ 2.5
ZNF558-203ENST00000595786 MGAMO43451 1857 aa30.69■■■□□ 2.5
ZNF558-203ENST00000595786 SLC4A8Q2Y0W8 1093 aa30.68■■■□□ 2.5
ZNF558-203ENST00000595786 CERKLQ49MI3 558 aaPredicted RBP30.68■■■□□ 2.5
ZNF558-203ENST00000595786 GH2P01242 217 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 GRK4P32298 578 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 PLCD1P51178 756 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 RRP1P56182 461 aaKnown RBP30.67■■■□□ 2.5
ZNF558-203ENST00000595786 GABPAQ06546 454 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 ANKRD13CQ8N6S4 541 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 SH3TC2Q8TF17 1288 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 GPATCH3Q96I76 525 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 DCP1AQ9NPI6 582 aaPredicted RBP30.67■■■□□ 2.5
ZNF558-203ENST00000595786 ATP8A2Q9NTI2 1148 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 MCM9Q9NXL9 1143 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 CENPFP49454 3210 aa30.67■■■□□ 2.5
ZNF558-203ENST00000595786 ECM2O94769 699 aaPredicted RBP30.66■■■□□ 2.5
ZNF558-203ENST00000595786 LCORLQ8N3X6 602 aa30.66■■■□□ 2.5
ZNF558-203ENST00000595786 CABP5Q9NP86 173 aa30.66■■■□□ 2.5
ZNF558-203ENST00000595786 PRKCZQ05513 592 aa30.65■■■□□ 2.5
ZNF558-203ENST00000595786 ABCB5Q2M3G0 1257 aa30.65■■■□□ 2.5
ZNF558-203ENST00000595786 SHROOM1Q2M3G4 852 aaPredicted RBP30.65■■■□□ 2.5
ZNF558-203ENST00000595786 USP17L2Q6R6M4 530 aa30.65■■■□□ 2.5
ZNF558-203ENST00000595786 DDX60LQ5H9U9 1706 aaKnown RBP30.64■■■□□ 2.5
ZNF558-203ENST00000595786 TNPO2O14787 897 aaKnown RBP30.64■■■□□ 2.5
ZNF558-203ENST00000595786 SHMT1P34896 483 aa30.64■■■□□ 2.5
ZNF558-203ENST00000595786 IRX3P78415 501 aaPredicted RBP30.64■■■□□ 2.5
ZNF558-203ENST00000595786 IRF5Q13568 498 aa30.64■■■□□ 2.5
ZNF558-203ENST00000595786 ARMT1Q9H993 441 aa30.64■■■□□ 2.5
ZNF558-203ENST00000595786 PCDHB15Q9Y5E8 787 aa30.64■■■□□ 2.5
ZNF558-203ENST00000595786 EN2P19622 333 aaPredicted RBP30.63■■■□□ 2.49
ZNF558-203ENST00000595786 SLAIN1Q8ND83 568 aa30.63■■■□□ 2.49
ZNF558-203ENST00000595786 SDR42E1Q8WUS8 393 aa30.63■■■□□ 2.49
ZNF558-203ENST00000595786 COA7Q96BR5 231 aa30.63■■■□□ 2.49
ZNF558-203ENST00000595786 C12orf42Q96LP6 360 aa30.63■■■□□ 2.49
ZNF558-203ENST00000595786 MORF4L1Q9UBU8 362 aa30.63■■■□□ 2.49
ZNF558-203ENST00000595786 NAV1Q8NEY1 1877 aa30.63■■■□□ 2.49
ZNF558-203ENST00000595786 MBD4O95243 580 aa30.62■■■□□ 2.49
ZNF558-203ENST00000595786 GTF3C2Q8WUA4 911 aaPredicted RBP30.62■■■□□ 2.49
ZNF558-203ENST00000595786 EMILIN3Q9NT22 766 aa30.62■■■□□ 2.49
ZNF558-203ENST00000595786 SWAP70Q9UH65 585 aa30.62■■■□□ 2.49
ZNF558-203ENST00000595786 USP14P54578 494 aa30.61■■■□□ 2.49
ZNF558-203ENST00000595786 PXYLP1Q8TE99 480 aa30.61■■■□□ 2.49
ZNF558-203ENST00000595786 KIAA1683Q9H0B3 1180 aa30.61■■■□□ 2.49
ZNF558-203ENST00000595786 GABRQQ9UN88 632 aa30.61■■■□□ 2.49
ZNF558-203ENST00000595786 MYH7P12883 1935 aa30.61■■■□□ 2.49
ZNF558-203ENST00000595786 FLT3LGP49771 235 aa30.6■■■□□ 2.49
ZNF558-203ENST00000595786 UBXN2AP68543 259 aa30.6■■■□□ 2.49
ZNF558-203ENST00000595786 RAB3GAP1Q15042 981 aa30.6■■■□□ 2.49
ZNF558-203ENST00000595786 P2RX7Q99572 595 aaKnown RBP30.6■■■□□ 2.49
ZNF558-203ENST00000595786 KBTBD3Q8NAB2 608 aa30.59■■■□□ 2.49
ZNF558-203ENST00000595786 DDRGK1Q96HY6 314 aa30.59■■■□□ 2.49
ZNF558-203ENST00000595786 FEZ1Q99689 392 aa30.59■■■□□ 2.49
ZNF558-203ENST00000595786 DOCK3Q8IZD9 2030 aa30.58■■■□□ 2.49
ZNF558-203ENST00000595786 ADCY3O60266 1144 aa30.58■■■□□ 2.49
ZNF558-203ENST00000595786 HERVK_113P62684 666 aa30.58■■■□□ 2.49
ZNF558-203ENST00000595786 SLFNL1Q499Z3 407 aa30.58■■■□□ 2.49
ZNF558-203ENST00000595786 PRPF38BQ5VTL8 546 aaKnown RBP30.58■■■□□ 2.49
ZNF558-203ENST00000595786 AMOTL1Q8IY63 956 aa30.58■■■□□ 2.49
ZNF558-203ENST00000595786 TTC41PQ6P2S7 1318 aa30.57■■■□□ 2.48
ZNF558-203ENST00000595786 PRKAB2O43741 272 aa30.57■■■□□ 2.48
ZNF558-203ENST00000595786 NKX2-3Q8TAU0 364 aa30.57■■■□□ 2.48
ZNF558-203ENST00000595786 BIN2Q9UBW5 565 aaPredicted RBP30.57■■■□□ 2.48
ZNF558-203ENST00000595786 GUCY1A2P33402 732 aa30.56■■■□□ 2.48
ZNF558-203ENST00000595786 GPRC5AQ8NFJ5 357 aa30.56■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L15C9J2P7 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L13C9JLJ4 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L11C9JVI0 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L18D6R9N7 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L22D6RA61 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L17D6RBQ6 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L19D6RCP7 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L20D6RJB6 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 ZFYP08048 801 aaPredicted RBP30.55■■■□□ 2.48
ZNF558-203ENST00000595786 USP17L24Q0WX57 530 aa30.55■■■□□ 2.48
ZNF558-203ENST00000595786 MTFR1Q15390 333 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms