RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.77■■□□□ 1.08
HOMER3-208ENST00000595756 GCC1Q96CN9 775 aa21.77■■□□□ 1.08
HOMER3-208ENST00000595756 SAP30BPQ9UHR5 308 aaKnown RBP21.77■■□□□ 1.08
HOMER3-208ENST00000595756 ZBTB21Q9ULJ3 1066 aa21.77■■□□□ 1.08
HOMER3-208ENST00000595756 GABRQQ9UN88 632 aa21.77■■□□□ 1.08
HOMER3-208ENST00000595756 BACE1P56817 501 aa21.76■■□□□ 1.07
HOMER3-208ENST00000595756 IRF5Q13568 498 aa21.76■■□□□ 1.07
HOMER3-208ENST00000595756 MTMR2Q13614 643 aa21.76■■□□□ 1.07
HOMER3-208ENST00000595756 DOCK3Q8IZD9 2030 aa21.76■■□□□ 1.07
HOMER3-208ENST00000595756 NKX2-3Q8TAU0 364 aa21.76■■□□□ 1.07
HOMER3-208ENST00000595756 SHISA4Q96DD7 197 aa21.76■■□□□ 1.07
HOMER3-208ENST00000595756 EHD4Q9H223 541 aa21.76■■□□□ 1.07
HOMER3-208ENST00000595756 GDF11O95390 407 aa21.75■■□□□ 1.07
HOMER3-208ENST00000595756 USP5P45974 858 aa21.75■■□□□ 1.07
HOMER3-208ENST00000595756 FLT3LGP49771 235 aa21.75■■□□□ 1.07
HOMER3-208ENST00000595756 C20orf194Q5TEA3 1177 aa21.75■■□□□ 1.07
HOMER3-208ENST00000595756 SIRT2Q8IXJ6 389 aa21.75■■□□□ 1.07
HOMER3-208ENST00000595756 PXYLP1Q8TE99 480 aa21.75■■□□□ 1.07
HOMER3-208ENST00000595756 ASCC2Q9H1I8 757 aaPredicted RBP21.75■■□□□ 1.07
HOMER3-208ENST00000595756 MYH7P12883 1935 aa21.74■■□□□ 1.07
HOMER3-208ENST00000595756 CCL5P13501 91 aa21.74■■□□□ 1.07
HOMER3-208ENST00000595756 JAG1P78504 1218 aa21.74■■□□□ 1.07
HOMER3-208ENST00000595756 COA7Q96BR5 231 aa21.74■■□□□ 1.07
HOMER3-208ENST00000595756 RIOK1Q9BRS2 568 aaKnown RBP21.74■■□□□ 1.07
HOMER3-208ENST00000595756 TMOD4Q9NZQ9 345 aa21.74■■□□□ 1.07
HOMER3-208ENST00000595756 C19orf81C9J6K1 198 aa21.73■■□□□ 1.07
HOMER3-208ENST00000595756 USP17L10C9JJH3 530 aa21.73■■□□□ 1.07
HOMER3-208ENST00000595756 ADCY3O60266 1144 aa21.73■■□□□ 1.07
HOMER3-208ENST00000595756 RAB11FIP3O75154 756 aa21.73■■□□□ 1.07
HOMER3-208ENST00000595756 GJB1P08034 283 aa21.73■■□□□ 1.07
HOMER3-208ENST00000595756 GJA8P48165 433 aa21.73■■□□□ 1.07
HOMER3-208ENST00000595756 BIN2Q9UBW5 565 aaPredicted RBP21.73■■□□□ 1.07
HOMER3-208ENST00000595756 SERPINB13Q9UIV8 391 aa21.73■■□□□ 1.07
HOMER3-208ENST00000595756 PLXNB2O15031 1838 aa21.73■■□□□ 1.07
HOMER3-208ENST00000595756 IFIT2P09913 472 aaKnown RBP21.72■■□□□ 1.07
HOMER3-208ENST00000595756 HOXA7P31268 230 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-208ENST00000595756 IRX3P78415 501 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-208ENST00000595756 SHROOM1Q2M3G4 852 aaPredicted RBP21.72■■□□□ 1.07
HOMER3-208ENST00000595756 TATDN1Q6P1N9 297 aa21.72■■□□□ 1.07
HOMER3-208ENST00000595756 MORF4L1Q9UBU8 362 aa21.72■■□□□ 1.07
HOMER3-208ENST00000595756 MYH8P13535 1937 aa21.71■■□□□ 1.07
HOMER3-208ENST00000595756 APBB1O00213 710 aa21.71■■□□□ 1.07
HOMER3-208ENST00000595756 PDE6AP16499 860 aa21.71■■□□□ 1.07
HOMER3-208ENST00000595756 TTC6Q86TZ1 520 aa21.71■■□□□ 1.07
HOMER3-208ENST00000595756 RNF208Q9H0X6 261 aa21.71■■□□□ 1.07
HOMER3-208ENST00000595756 MAGEB6P1A0A0J9YX57 407 aa21.7■■□□□ 1.06
HOMER3-208ENST00000595756 INHAP05111 366 aa21.7■■□□□ 1.06
HOMER3-208ENST00000595756 SLC9C2Q5TAH2 1124 aa21.7■■□□□ 1.06
HOMER3-208ENST00000595756 SUPT16HQ9Y5B9 1047 aaKnown RBP21.7■■□□□ 1.06
HOMER3-208ENST00000595756 CEP290O15078 2479 aa21.69■■□□□ 1.06
HOMER3-208ENST00000595756 GOLIM4O00461 696 aa21.69■■□□□ 1.06
HOMER3-208ENST00000595756 GH2P01242 217 aa21.69■■□□□ 1.06
HOMER3-208ENST00000595756 ELNP15502 786 aa21.69■■□□□ 1.06
HOMER3-208ENST00000595756 GTF3C2Q8WUA4 911 aaPredicted RBP21.69■■□□□ 1.06
HOMER3-208ENST00000595756 C12orf42Q96LP6 360 aa21.69■■□□□ 1.06
HOMER3-208ENST00000595756 DNAJC2Q99543 621 aaKnown RBP21.69■■□□□ 1.06
HOMER3-208ENST00000595756 UNC93B1Q9H1C4 597 aa21.69■■□□□ 1.06
HOMER3-208ENST00000595756 TCRBV5S4A2TA0A5A2 114 aa21.68■■□□□ 1.06
HOMER3-208ENST00000595756 CAPN2P17655 700 aa21.68■■□□□ 1.06
HOMER3-208ENST00000595756 HERVK_113P62684 666 aa21.68■■□□□ 1.06
HOMER3-208ENST00000595756 AAMPQ13685 434 aa21.68■■□□□ 1.06
HOMER3-208ENST00000595756 USP17L2Q6R6M4 530 aa21.68■■□□□ 1.06
HOMER3-208ENST00000595756 UBE2Q1Q7Z7E8 422 aa21.68■■□□□ 1.06
HOMER3-208ENST00000595756 U2AF1L4Q8WU68 220 aaKnown RBP21.68■■□□□ 1.06
HOMER3-208ENST00000595756 CRNKL1Q9BZJ0 848 aaKnown RBP21.68■■□□□ 1.06
HOMER3-208ENST00000595756 ZNF532Q9HCE3 1301 aa21.68■■□□□ 1.06
HOMER3-208ENST00000595756 SHMT1P34896 483 aa21.66■■□□□ 1.06
HOMER3-208ENST00000595756 CERKLQ49MI3 558 aaPredicted RBP21.66■■□□□ 1.06
HOMER3-208ENST00000595756 P2RX7Q99572 595 aaKnown RBP21.66■■□□□ 1.06
HOMER3-208ENST00000595756 PAK6Q9NQU5 681 aaPredicted RBP21.66■■□□□ 1.06
HOMER3-208ENST00000595756 EMILIN3Q9NT22 766 aa21.66■■□□□ 1.06
HOMER3-208ENST00000595756 PAG1Q9NWQ8 432 aa21.66■■□□□ 1.06
HOMER3-208ENST00000595756 BAZ2AQ9UIF9 1905 aaKnown RBP21.65■■□□□ 1.06
HOMER3-208ENST00000595756 HMGCRP04035 888 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 ATP5JP18859 108 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 PLCD1P51178 756 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 USP14P54578 494 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 GABPAQ06546 454 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 ABCB5Q2M3G0 1257 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 FEZ1Q99689 392 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 GJD2Q9UKL4 321 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 TAOK2Q9UL54 1235 aa21.65■■□□□ 1.06
HOMER3-208ENST00000595756 SGPL1O95470 568 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 POLR3DP05423 398 aaPredicted RBP21.64■■□□□ 1.05
HOMER3-208ENST00000595756 RAB3GAP1Q15042 981 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 LCORLQ8N3X6 602 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 GPRC5AQ8NFJ5 357 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 SOCS4Q8WXH5 440 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 EDC3Q96F86 508 aaKnown RBP21.64■■□□□ 1.05
HOMER3-208ENST00000595756 HAUS7Q99871 368 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 KIAA1683Q9H0B3 1180 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 TXNRD2Q9NNW7 524 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 CABP5Q9NP86 173 aa21.64■■□□□ 1.05
HOMER3-208ENST00000595756 RANBP2P49792 3224 aaKnown RBP21.63■■□□□ 1.05
HOMER3-208ENST00000595756 FARP2O94887 1054 aaPredicted RBP21.63■■□□□ 1.05
HOMER3-208ENST00000595756 ADD2P35612 726 aa21.63■■□□□ 1.05
HOMER3-208ENST00000595756 ERVK-9P63128 1117 aa21.63■■□□□ 1.05
HOMER3-208ENST00000595756 ERVK-24P63145 666 aa21.63■■□□□ 1.05
HOMER3-208ENST00000595756 HABP4Q5JVS0 413 aaKnown RBP21.63■■□□□ 1.05
HOMER3-208ENST00000595756 HTATIP2Q9BUP3 242 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms