RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 CYP2C19P33261 490 aa18.86■□□□□ 0.61
LIG1-206ENST00000594067 ELOA2Q8IYF1 753 aaPredicted RBP18.86■□□□□ 0.61
LIG1-206ENST00000594067 NUP98P52948 1817 aa18.86■□□□□ 0.61
LIG1-206ENST00000594067 A0A0G2JS52 829 aa18.86■□□□□ 0.61
LIG1-206ENST00000594067 URI1O94763 535 aaPredicted RBP18.86■□□□□ 0.61
LIG1-206ENST00000594067 SDR42E1Q8WUS8 393 aa18.86■□□□□ 0.61
LIG1-206ENST00000594067 CSRNP2Q9H175 543 aa18.86■□□□□ 0.61
LIG1-206ENST00000594067 PNPLA7Q6ZV29 1317 aa18.86■□□□□ 0.61
LIG1-206ENST00000594067 TADA3O75528 432 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 SARSP49591 514 aaKnown RBP18.85■□□□□ 0.61
LIG1-206ENST00000594067 ADKP55263 362 aaKnown RBP18.85■□□□□ 0.61
LIG1-206ENST00000594067 PPARAQ07869 468 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 MORC3Q14149 939 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 UBAC1Q9BSL1 405 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 SRRTQ9BXP5 876 aaKnown RBP18.85■□□□□ 0.61
LIG1-206ENST00000594067 PPP2R2CQ9Y2T4 447 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 SRPRBQ9Y5M8 271 aaKnown RBP18.85■□□□□ 0.61
LIG1-206ENST00000594067 PARP3Q9Y6F1 533 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 LRP5O75197 1615 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 CCDC196A0A1B0GTZ2 297 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 FAM205CA6NFA0 338 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 ARHGAP6O43182 974 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 CYP7A1P22680 504 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 TBX2Q13207 712 aaPredicted RBP18.85■□□□□ 0.61
LIG1-206ENST00000594067 MLKLQ8NB16 471 aa18.85■□□□□ 0.61
LIG1-206ENST00000594067 BAG1Q99933 345 aaPredicted RBP18.85■□□□□ 0.61
LIG1-206ENST00000594067 VWA3AA6NCI4 1184 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 ZSCAN12O43309 604 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 ACTN4O43707 911 aaKnown RBP18.84■□□□□ 0.61
LIG1-206ENST00000594067 ZNF18P17022 549 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 NT5DC1Q5TFE4 455 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 TMCO3Q6UWJ1 677 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 ADGRA1Q86SQ6 560 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 ENOX1Q8TC92 643 aaKnown RBP18.84■□□□□ 0.61
LIG1-206ENST00000594067 SHISA4Q96DD7 197 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 MED15Q96RN5 788 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 CARD6Q9BX69 1037 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 SAMSN1Q9NSI8 373 aaKnown RBP18.84■□□□□ 0.61
LIG1-206ENST00000594067 ARGLU1Q9NWB6 273 aaPredicted RBP18.84■□□□□ 0.61
LIG1-206ENST00000594067 hCG_1642624A0A1W2PR95 340 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 TMTC2Q8N394 836 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 MNS1Q8NEH6 495 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 AK7Q96M32 723 aa18.84■□□□□ 0.61
LIG1-206ENST00000594067 RNF41Q9H4P4 317 aaPredicted RBP18.84■□□□□ 0.61
LIG1-206ENST00000594067 TIAM2Q8IVF5 1701 aa18.83■□□□□ 0.61
LIG1-206ENST00000594067 EFCAB8A8MWE9 144 aa18.83■□□□□ 0.61
LIG1-206ENST00000594067 IGHMBP2P38935 993 aaKnown RBP18.83■□□□□ 0.61
LIG1-206ENST00000594067 FCHSD1Q86WN1 690 aa18.83■□□□□ 0.61
LIG1-206ENST00000594067 TC2NQ8N9U0 490 aa18.83■□□□□ 0.61
LIG1-206ENST00000594067 ZNF579Q8NAF0 562 aaKnown RBP18.83■□□□□ 0.61
LIG1-206ENST00000594067 VPS54Q9P1Q0 977 aa18.83■□□□□ 0.61
LIG1-206ENST00000594067 ABCF2Q9UG63 623 aa18.83■□□□□ 0.61
LIG1-206ENST00000594067 DACH1Q9UI36 760 aa18.83■□□□□ 0.61
LIG1-206ENST00000594067 TNKSO95271 1327 aa18.83■□□□□ 0.6
LIG1-206ENST00000594067 SPECC1LQ69YQ0 1117 aa18.83■□□□□ 0.6
LIG1-206ENST00000594067 CEP131Q9UPN4 1083 aa18.83■□□□□ 0.6
LIG1-206ENST00000594067 ZNF335Q9H4Z2 1342 aaPredicted RBP18.82■□□□□ 0.6
LIG1-206ENST00000594067 EXOC5O00471 708 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 ZBTB22O15209 634 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 EIF5P55010 431 aaKnown RBP18.82■□□□□ 0.6
LIG1-206ENST00000594067 CHRNDQ07001 517 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 TOGARAM2Q6ZUX3 1019 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 DHX58Q96C10 678 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 CHD4Q14839 1912 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 PRDM1O75626 825 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 CCDC152Q4G0S7 254 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 EARS2Q5JPH6 523 aaKnown RBP18.82■□□□□ 0.6
LIG1-206ENST00000594067 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.82■□□□□ 0.6
LIG1-206ENST00000594067 CALCOCO1Q9P1Z2 691 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 ARAP2Q8WZ64 1704 aa18.82■□□□□ 0.6
LIG1-206ENST00000594067 AKAP17AQ02040 695 aaKnown RBP18.81■□□□□ 0.6
LIG1-206ENST00000594067 SEC23AQ15436 765 aa18.81■□□□□ 0.6
LIG1-206ENST00000594067 EPSTI1Q96J88 318 aa18.81■□□□□ 0.6
LIG1-206ENST00000594067 TMEM51Q9NW97 253 aa18.81■□□□□ 0.6
LIG1-206ENST00000594067 DOCK2Q92608 1830 aa18.81■□□□□ 0.6
LIG1-206ENST00000594067 A0A087X0B3 334 aa18.81■□□□□ 0.6
LIG1-206ENST00000594067 SEC31AO94979 1220 aaKnown RBP18.81■□□□□ 0.6
LIG1-206ENST00000594067 CASP1P29466 404 aa18.81■□□□□ 0.6
LIG1-206ENST00000594067 AFMP43652 599 aa18.81■□□□□ 0.6
LIG1-206ENST00000594067 RAI14Q9P0K7 980 aa18.81■□□□□ 0.6
LIG1-206ENST00000594067 CYP2D7A0A087X1C5 515 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 GNG11P61952 73 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 KANK3Q6NY19 840 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 INTS5Q6P9B9 1019 aaKnown RBP18.8■□□□□ 0.6
LIG1-206ENST00000594067 NUTM2AQ8IVF1 878 aaPredicted RBP18.8■□□□□ 0.6
LIG1-206ENST00000594067 TRIML1Q8N9V2 468 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 ESR2Q92731 530 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 EPC1Q9H2F5 836 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 TRIM75PA6NK02 468 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 DISP2A7MBM2 1401 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 PLCD1P51178 756 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 WDR24Q96S15 920 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 DESI2Q9BSY9 194 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 MTA3Q9BTC8 594 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 RNF26Q9BY78 433 aaPredicted RBP18.8■□□□□ 0.6
LIG1-206ENST00000594067 UBXN6Q9BZV1 441 aa18.8■□□□□ 0.6
LIG1-206ENST00000594067 MAGEB6P1A0A0J9YX57 407 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 WTIPA6NIX2 430 aaPredicted RBP18.79■□□□□ 0.6
LIG1-206ENST00000594067 STX10O60499 249 aa18.79■□□□□ 0.6
LIG1-206ENST00000594067 TPM1P09493 284 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms