RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 ZNF70Q9UC06 446 aaPredicted RBP24.36■■□□□ 1.49
PNKP-203ENST00000593946 ZDHHC9Q9Y397 364 aa24.36■■□□□ 1.49
PNKP-203ENST00000593946 GREB1LQ9C091 1923 aaPredicted RBP24.36■■□□□ 1.49
PNKP-203ENST00000593946 JAK2O60674 1132 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 GMPSP49915 693 aaPredicted RBP24.35■■□□□ 1.49
PNKP-203ENST00000593946 METAP2P50579 478 aaKnown RBP eCLIP24.35■■□□□ 1.49
PNKP-203ENST00000593946 RCAN1P53805 252 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 RAB11FIP4Q86YS3 637 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 MYOZ2Q9NPC6 264 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 TCP11L1Q9NUJ3 509 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 SHTN1A0MZ66 631 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 DHX16O60231 1041 aaKnown RBP24.35■■□□□ 1.49
PNKP-203ENST00000593946 NMT2O60551 498 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 IFIT1BQ5T764 474 aaKnown RBP24.35■■□□□ 1.49
PNKP-203ENST00000593946 SH3BP5LQ7L8J4 393 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 MICU3Q86XE3 530 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 IL17RBQ9NRM6 502 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 SWAP70Q9UH65 585 aa24.35■■□□□ 1.49
PNKP-203ENST00000593946 DDTLA6NHG4 134 aaPredicted RBP24.34■■□□□ 1.49
PNKP-203ENST00000593946 BRD1O95696 1058 aa24.34■■□□□ 1.49
PNKP-203ENST00000593946 TSPY3P0CV98 308 aa24.34■■□□□ 1.49
PNKP-203ENST00000593946 TSPY8P0CW00 308 aa24.34■■□□□ 1.49
PNKP-203ENST00000593946 SYNE3Q6ZMZ3 975 aa24.34■■□□□ 1.49
PNKP-203ENST00000593946 ZNF654Q8IZM8 581 aa24.34■■□□□ 1.49
PNKP-203ENST00000593946 TNPO1Q92973 898 aaKnown RBP24.34■■□□□ 1.49
PNKP-203ENST00000593946 MYL10Q9BUA6 226 aa24.34■■□□□ 1.49
PNKP-203ENST00000593946 GJA3Q9Y6H8 435 aa24.34■■□□□ 1.49
PNKP-203ENST00000593946 CLRN2A0PK11 232 aa24.33■■□□□ 1.49
PNKP-203ENST00000593946 WNT10BO00744 389 aa24.33■■□□□ 1.49
PNKP-203ENST00000593946 SYT1P21579 422 aa24.33■■□□□ 1.49
PNKP-203ENST00000593946 FKBP1CQ5VVH2 108 aa24.33■■□□□ 1.49
PNKP-203ENST00000593946 RCSD1Q6JBY9 416 aa24.33■■□□□ 1.49
PNKP-203ENST00000593946 TAOK2Q9UL54 1235 aa24.33■■□□□ 1.49
PNKP-203ENST00000593946 PLIN4Q96Q06 1357 aa24.33■■□□□ 1.49
PNKP-203ENST00000593946 PTPDC1A2A3K4 754 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 GOLGA8AA7E2F4 631 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 RXRAP19793 462 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 HMGN5P82970 282 aaKnown RBP24.32■■□□□ 1.48
PNKP-203ENST00000593946 CCDC178Q5BJE1 867 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 NEDD1Q8NHV4 660 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 PI4KBQ9UBF8 816 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 DGKHQ86XP1 1220 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 MICALL2Q8IY33 904 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 ANKS1AQ92625 1134 aa24.32■■□□□ 1.48
PNKP-203ENST00000593946 FAM217BQ9NTX9 383 aaPredicted RBP24.32■■□□□ 1.48
PNKP-203ENST00000593946 CNTNAP1P78357 1384 aa24.31■■□□□ 1.48
PNKP-203ENST00000593946 STX6O43752 255 aa24.31■■□□□ 1.48
PNKP-203ENST00000593946 MYO1BO43795 1136 aa24.31■■□□□ 1.48
PNKP-203ENST00000593946 PDCP20941 246 aa24.31■■□□□ 1.48
PNKP-203ENST00000593946 CDC27P30260 824 aa24.31■■□□□ 1.48
PNKP-203ENST00000593946 SHMT1P34896 483 aa24.31■■□□□ 1.48
PNKP-203ENST00000593946 CNOT7Q9UIV1 285 aaKnown RBP24.31■■□□□ 1.48
PNKP-203ENST00000593946 MYH6P13533 1939 aa24.31■■□□□ 1.48
PNKP-203ENST00000593946 WDR33Q9C0J8 1336 aaKnown RBP24.3■■□□□ 1.48
PNKP-203ENST00000593946 TCP10L2B9ZVM9 353 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 CPLX1O14810 134 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 PDIA4P13667 645 aaKnown RBP24.3■■□□□ 1.48
PNKP-203ENST00000593946 ADD1P35611 737 aaKnown RBP24.3■■□□□ 1.48
PNKP-203ENST00000593946 NBPF9Q3BBW0 867 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 METTL16Q86W50 562 aaKnown RBP24.3■■□□□ 1.48
PNKP-203ENST00000593946 ZSCAN29Q8IWY8 852 aaPredicted RBP24.3■■□□□ 1.48
PNKP-203ENST00000593946 DNAJC18Q9H819 358 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 CATIPQ7Z7H3 387 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 CCDC144CPQ8IYA2 1237 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 GPC2Q8N158 579 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 FAM151AQ8WW52 585 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 DDX11Q96FC9 970 aa24.3■■□□□ 1.48
PNKP-203ENST00000593946 EGFRP00533 1210 aa24.29■■□□□ 1.48
PNKP-203ENST00000593946 TROAPQ12815 778 aa24.29■■□□□ 1.48
PNKP-203ENST00000593946 NFKBIBQ15653 356 aa24.29■■□□□ 1.48
PNKP-203ENST00000593946 NTRK3Q16288 839 aa24.29■■□□□ 1.48
PNKP-203ENST00000593946 LARP1BQ659C4 914 aaKnown RBP24.29■■□□□ 1.48
PNKP-203ENST00000593946 CLEC17AQ6ZS10 378 aa24.29■■□□□ 1.48
PNKP-203ENST00000593946 FAM83AQ86UY5 434 aa24.29■■□□□ 1.48
PNKP-203ENST00000593946 FOXP4Q8IVH2 680 aaPredicted RBP24.29■■□□□ 1.48
PNKP-203ENST00000593946 DDAH1O94760 285 aa24.28■■□□□ 1.48
PNKP-203ENST00000593946 PPP2R5BQ15173 497 aa24.28■■□□□ 1.48
PNKP-203ENST00000593946 RTN1Q16799 776 aa24.28■■□□□ 1.48
PNKP-203ENST00000593946 CRACR2BQ8N4Y2 399 aaPredicted RBP24.28■■□□□ 1.48
PNKP-203ENST00000593946 FANCBQ8NB91 859 aa24.28■■□□□ 1.48
PNKP-203ENST00000593946 VEZTQ9HBM0 779 aa24.28■■□□□ 1.48
PNKP-203ENST00000593946 RNF181Q9P0P0 153 aa24.28■■□□□ 1.48
PNKP-203ENST00000593946 KIF3AQ9Y496 699 aa24.28■■□□□ 1.48
PNKP-203ENST00000593946 MYH4Q9Y623 1939 aa24.28■■□□□ 1.48
PNKP-203ENST00000593946 CALM1P0DP23 149 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 CALM2P0DP24 149 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 CALM3P0DP25 149 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 FDPSP14324 419 aaKnown RBP24.27■■□□□ 1.48
PNKP-203ENST00000593946 NOVP48745 357 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 CPLX2Q6PUV4 134 aaKnown RBP24.27■■□□□ 1.48
PNKP-203ENST00000593946 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.27■■□□□ 1.48
PNKP-203ENST00000593946 CCDC196A0A1B0GTZ2 297 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 CDKL5O76039 1030 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 SLURP2P0DP57 97 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 AKR1B1P15121 316 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 FAM184AQ8NB25 1140 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 NUP133Q8WUM0 1156 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 CSRNP1Q96S65 589 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 MTMR6Q9Y217 621 aa24.27■■□□□ 1.48
PNKP-203ENST00000593946 TCHHQ07283 1943 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms