RNA–Protein interactions for RNA: ENST00000593549.5

SOX2-OT-220, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 756 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-220ENST00000593549 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
SOX2-OT-220ENST00000593549 LBX1P52954 281 aa16.27■□□□□ 0.2
SOX2-OT-220ENST00000593549 ARPP21Q9UBL0 812 aaPredicted RBP16.27■□□□□ 0.2
SOX2-OT-220ENST00000593549 LAMB1P07942 1786 aa16.27■□□□□ 0.2
SOX2-OT-220ENST00000593549 DOCK1Q14185 1865 aa16.27■□□□□ 0.19
SOX2-OT-220ENST00000593549 MYH1P12882 1939 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 CXCL11O14625 94 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 APPP05067 770 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 CETPP11597 493 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 MOGSQ13724 837 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 MCMDC2Q4G0Z9 681 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 SBK1Q52WX2 424 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 ZNF589Q86UQ0 364 aaPredicted RBP16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 IFNL3Q8IZI9 196 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 ZBTB21Q9ULJ3 1066 aa16.26■□□□□ 0.19
SOX2-OT-220ENST00000593549 TRIM75PA6NK02 468 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 USP17L5A8MUK1 530 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 BTBD19C9JJ37 291 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 TBC1D8O95759 1140 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 GH2P01242 217 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 ASNSP08243 561 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 TDO2P48775 406 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 CERKLQ49MI3 558 aaPredicted RBP16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 C16orf86Q6ZW13 317 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 AMOTL1Q8IY63 956 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 FAM43AQ8N2R8 423 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 R3HDMLQ9H3Y0 253 aa16.25■□□□□ 0.19
SOX2-OT-220ENST00000593549 A0A0G2JLL6 359 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 ALDH1A1P00352 501 aa16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 CDK8P49336 464 aa16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 PRRT2Q7Z6L0 340 aaPredicted RBP16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 CFHR5Q9BXR6 569 aa16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 GINM1Q9NU53 330 aa16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 SWAP70Q9UH65 585 aa16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 TAOK2Q9UL54 1235 aa16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 ROBO3Q96MS0 1386 aa16.24■□□□□ 0.19
SOX2-OT-220ENST00000593549 CCDC171Q6TFL3 1326 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 MINDY4BA8MYZ0 360 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 SPP2Q13103 211 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 ABCB5Q2M3G0 1257 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 ERICH6BQ5W0A0 696 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 CWC27Q6UX04 472 aaKnown RBP16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 ZNF280CQ8ND82 737 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 NACAP1Q9BZK3 213 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 NAPBQ9H115 298 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 DIAPH3Q9NSV4 1193 aa16.23■□□□□ 0.19
SOX2-OT-220ENST00000593549 HIP1O00291 1037 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 GUCY1A2P33402 732 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 CRHR2Q13324 411 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 OTUD7BQ6GQQ9 843 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 GPAT2Q6NUI2 795 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 WDR18Q9BV38 432 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 IL25Q9H293 177 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 AS3MTQ9HBK9 375 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 PRDM10Q9NQV6 1147 aa16.22■□□□□ 0.19
SOX2-OT-220ENST00000593549 HSPD1P10809 573 aaKnown RBP16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 AKR1B1P15121 316 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 DGKZQ13574 1117 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 MTMR2Q13614 643 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 SEPT2Q15019 361 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 COL13A1Q5TAT6 717 aaPredicted RBP16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 ANKRD23Q86SG2 305 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 STK11IPQ8N1F8 1099 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 PPP4R2Q9NY27 417 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 PHIPQ8WWQ0 1821 aa16.21■□□□□ 0.19
SOX2-OT-220ENST00000593549 BAZ2AQ9UIF9 1905 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 MPHOSPH10O00566 681 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 HMGCS2P54868 508 aa16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 PPARAQ07869 468 aa16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 TAF1CQ15572 869 aaPredicted RBP16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 ALX1Q15699 326 aa16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 SH3D19Q5HYK7 790 aa16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 GADL1Q6ZQY3 521 aa16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 FASTKD5Q7L8L6 764 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 ZCCHC17Q9NP64 241 aaKnown RBP16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 CABP5Q9NP86 173 aa16.2■□□□□ 0.18
SOX2-OT-220ENST00000593549 ATAD5Q96QE3 1844 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 PDHXO00330 501 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 FGAP02671 866 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 RASA1P20936 1047 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 CHMLP26374 656 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 BACE1P56817 501 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 TREML2Q5T2D2 321 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 TMEM179Q6ZVK1 233 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 ZMYM6O95789 1325 aa16.19■□□□□ 0.18
SOX2-OT-220ENST00000593549 USP17L10C9JJH3 530 aa16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 GPR25O00155 361 aa16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 PRDM1O75626 825 aa16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 NOM1Q5C9Z4 860 aaKnown RBP16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 CLEC10AQ8IUN9 316 aa16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 PROCA1Q8NCQ7 364 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 ACER1Q8TDN7 264 aa16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 ZNF296Q8WUU4 475 aaPredicted RBP16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 CCDC17Q96LX7 622 aa16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.18■□□□□ 0.18
SOX2-OT-220ENST00000593549 AGTPBP1Q9UPW5 1226 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms