RNA–Protein interactions for RNA: ENST00000593048.5

CIRBP-241, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 650 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-241ENST00000593048 DNAJC2Q99543 621 aaKnown RBP19.61■□□□□ 0.73
CIRBP-241ENST00000593048 DNAJC18Q9H819 358 aa19.61■□□□□ 0.73
CIRBP-241ENST00000593048 GINM1Q9NU53 330 aa19.61■□□□□ 0.73
CIRBP-241ENST00000593048 FLT3LGP49771 235 aa19.6■□□□□ 0.73
CIRBP-241ENST00000593048 FAM110CQ1W6H9 321 aa19.6■□□□□ 0.73
CIRBP-241ENST00000593048 TTC6Q86TZ1 520 aa19.6■□□□□ 0.73
CIRBP-241ENST00000593048 SIRT2Q8IXJ6 389 aa19.6■□□□□ 0.73
CIRBP-241ENST00000593048 TAOK2Q9UL54 1235 aa19.6■□□□□ 0.73
CIRBP-241ENST00000593048 MAGEB6P1A0A0J9YX57 407 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 C19orf81C9J6K1 198 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 USP17L10C9JJH3 530 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 ADCY3O60266 1144 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 IRX3P78415 501 aaPredicted RBP19.59■□□□□ 0.73
CIRBP-241ENST00000593048 SLC9C2Q5TAH2 1124 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 NKX2-3Q8TAU0 364 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 RNF208Q9H0X6 261 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 ASCC2Q9H1I8 757 aaPredicted RBP19.59■□□□□ 0.73
CIRBP-241ENST00000593048 ZBTB21Q9ULJ3 1066 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 PHIPQ8WWQ0 1821 aa19.59■□□□□ 0.73
CIRBP-241ENST00000593048 GOLIM4O00461 696 aa19.58■□□□□ 0.72
CIRBP-241ENST00000593048 CCL5P13501 91 aa19.58■□□□□ 0.72
CIRBP-241ENST00000593048 JAG1P78504 1218 aa19.58■□□□□ 0.72
CIRBP-241ENST00000593048 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.58■□□□□ 0.72
CIRBP-241ENST00000593048 SERPINB13Q9UIV8 391 aa19.58■□□□□ 0.72
CIRBP-241ENST00000593048 GH2P01242 217 aa19.57■□□□□ 0.72
CIRBP-241ENST00000593048 POLR3DP05423 398 aaPredicted RBP19.57■□□□□ 0.72
CIRBP-241ENST00000593048 SHROOM1Q2M3G4 852 aaPredicted RBP19.57■□□□□ 0.72
CIRBP-241ENST00000593048 CRNKL1Q9BZJ0 848 aaKnown RBP19.57■□□□□ 0.72
CIRBP-241ENST00000593048 PTPRFP10586 1907 aa19.57■□□□□ 0.72
CIRBP-241ENST00000593048 MYO5AQ9Y4I1 1855 aaKnown RBP19.56■□□□□ 0.72
CIRBP-241ENST00000593048 PDE6AP16499 860 aa19.56■□□□□ 0.72
CIRBP-241ENST00000593048 PDE3AQ14432 1141 aa19.56■□□□□ 0.72
CIRBP-241ENST00000593048 PXYLP1Q8TE99 480 aa19.56■□□□□ 0.72
CIRBP-241ENST00000593048 RIOK1Q9BRS2 568 aaKnown RBP19.56■□□□□ 0.72
CIRBP-241ENST00000593048 EHD4Q9H223 541 aa19.56■□□□□ 0.72
CIRBP-241ENST00000593048 ATAD5Q96QE3 1844 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 ZNF532Q9HCE3 1301 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 GJB1P08034 283 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 ELNP15502 786 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 HOXA7P31268 230 aaPredicted RBP19.55■□□□□ 0.72
CIRBP-241ENST00000593048 IRF5Q13568 498 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 RAB3GAP1Q15042 981 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 CERKLQ49MI3 558 aaPredicted RBP19.55■□□□□ 0.72
CIRBP-241ENST00000593048 C20orf194Q5TEA3 1177 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 TATDN1Q6P1N9 297 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 USP17L2Q6R6M4 530 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 P2RX7Q99572 595 aaKnown RBP19.55■□□□□ 0.72
CIRBP-241ENST00000593048 BOLA2Q9H3K6 86 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 CABP5Q9NP86 173 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 GTF3C3Q9Y5Q9 886 aa19.55■□□□□ 0.72
CIRBP-241ENST00000593048 SIPA1L1O43166 1804 aa19.54■□□□□ 0.72
CIRBP-241ENST00000593048 GJA8P48165 433 aa19.54■□□□□ 0.72
CIRBP-241ENST00000593048 FEZ1Q99689 392 aa19.54■□□□□ 0.72
CIRBP-241ENST00000593048 PAG1Q9NWQ8 432 aa19.54■□□□□ 0.72
CIRBP-241ENST00000593048 MCM9Q9NXL9 1143 aa19.54■□□□□ 0.72
CIRBP-241ENST00000593048 INHAP05111 366 aa19.53■□□□□ 0.72
CIRBP-241ENST00000593048 PLCD1P51178 756 aa19.53■□□□□ 0.72
CIRBP-241ENST00000593048 ZYXQ15942 572 aaKnown RBP19.53■□□□□ 0.72
CIRBP-241ENST00000593048 ABCB5Q2M3G0 1257 aa19.53■□□□□ 0.72
CIRBP-241ENST00000593048 CCAR1Q8IX12 1150 aaKnown RBP19.53■□□□□ 0.72
CIRBP-241ENST00000593048 EDC3Q96F86 508 aaKnown RBP19.53■□□□□ 0.72
CIRBP-241ENST00000593048 LRRCC1Q9C099 1032 aa19.53■□□□□ 0.72
CIRBP-241ENST00000593048 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.53■□□□□ 0.721e-7■■■□□ 16.4
CIRBP-241ENST00000593048 UNC93B1Q9H1C4 597 aa19.53■□□□□ 0.72
CIRBP-241ENST00000593048 CEP290O15078 2479 aa19.53■□□□□ 0.72
CIRBP-241ENST00000593048 FOCADQ5VW36 1801 aa19.53■□□□□ 0.72
CIRBP-241ENST00000593048 CDK5RAP2Q96SN8 1893 aa19.52■□□□□ 0.72
CIRBP-241ENST00000593048 ATP5JP18859 108 aa19.52■□□□□ 0.72
CIRBP-241ENST00000593048 HERVK_113P62684 666 aa19.52■□□□□ 0.72
CIRBP-241ENST00000593048 GPRC5AQ8NFJ5 357 aa19.52■□□□□ 0.72
CIRBP-241ENST00000593048 SHISA4Q96DD7 197 aa19.52■□□□□ 0.72
CIRBP-241ENST00000593048 EMILIN3Q9NT22 766 aa19.52■□□□□ 0.72
CIRBP-241ENST00000593048 MORF4L1Q9UBU8 362 aa19.52■□□□□ 0.72
CIRBP-241ENST00000593048 LOC285556D6RIA3 1793 aa19.52■□□□□ 0.71
CIRBP-241ENST00000593048 MGAMO43451 1857 aa19.52■□□□□ 0.71
CIRBP-241ENST00000593048 FXR1P51114 621 aaKnown RBP eCLIP19.51■□□□□ 0.71
CIRBP-241ENST00000593048 USP14P54578 494 aa19.51■□□□□ 0.71
CIRBP-241ENST00000593048 U2AF1L4Q8WU68 220 aaKnown RBP19.51■□□□□ 0.71
CIRBP-241ENST00000593048 GTF3C2Q8WUA4 911 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-241ENST00000593048 SDR42E1Q8WUS8 393 aa19.51■□□□□ 0.71
CIRBP-241ENST00000593048 DPF3Q92784 378 aa19.51■□□□□ 0.71
CIRBP-241ENST00000593048 TCRBV5S4A2TA0A5A2 114 aa19.5■□□□□ 0.71
CIRBP-241ENST00000593048 MPHOSPH10O00566 681 aaKnown RBP19.5■□□□□ 0.71
CIRBP-241ENST00000593048 SGPL1O95470 568 aa19.5■□□□□ 0.71
CIRBP-241ENST00000593048 TFRCP02786 760 aaKnown RBP19.5■□□□□ 0.71
CIRBP-241ENST00000593048 LCORLQ8N3X6 602 aa19.5■□□□□ 0.71
CIRBP-241ENST00000593048 HAUS7Q99871 368 aa19.5■□□□□ 0.71
CIRBP-241ENST00000593048 PAGR1Q9BTK6 254 aa19.5■□□□□ 0.71
CIRBP-241ENST00000593048 ARMT1Q9H993 441 aa19.5■□□□□ 0.71
CIRBP-241ENST00000593048 CWC22Q9HCG8 908 aaKnown RBP19.5■□□□□ 0.71
CIRBP-241ENST00000593048 MYH1P12882 1939 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L15C9J2P7 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L13C9JLJ4 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L11C9JVI0 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L18D6R9N7 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L22D6RA61 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L17D6RBQ6 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L19D6RCP7 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 USP17L20D6RJB6 530 aa19.49■□□□□ 0.71
CIRBP-241ENST00000593048 SMARCA5O60264 1052 aaPredicted RBP19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms