RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 ARMT1Q9H993 441 aa24.41■■□□□ 1.5
CIRBP-239ENST00000592467 DCP1AQ9NPI6 582 aaPredicted RBP24.41■■□□□ 1.5
CIRBP-239ENST00000592467 SERPINB13Q9UIV8 391 aa24.41■■□□□ 1.5
CIRBP-239ENST00000592467 RBBP6Q7Z6E9 1792 aaKnown RBP24.4■■□□□ 1.5
CIRBP-239ENST00000592467 HMGCS2P54868 508 aa24.4■■□□□ 1.5
CIRBP-239ENST00000592467 TTC6Q86TZ1 520 aa24.4■■□□□ 1.5
CIRBP-239ENST00000592467 OTUD7AQ8TE49 926 aaPredicted RBP24.4■■□□□ 1.5
CIRBP-239ENST00000592467 SALL3Q9BXA9 1300 aa24.39■■□□□ 1.5
CIRBP-239ENST00000592467 BRCA2P51587 3418 aa24.39■■□□□ 1.5
CIRBP-239ENST00000592467 PRKAB2O43741 272 aa24.39■■□□□ 1.49
CIRBP-239ENST00000592467 MBD4O95243 580 aa24.39■■□□□ 1.49
CIRBP-239ENST00000592467 SHMT1P34896 483 aa24.39■■□□□ 1.49
CIRBP-239ENST00000592467 ARMC5Q96C12 935 aa24.39■■□□□ 1.49
CIRBP-239ENST00000592467 TRIM47Q96LD4 638 aa24.39■■□□□ 1.49
CIRBP-239ENST00000592467 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.39■■□□□ 1.49
CIRBP-239ENST00000592467 AS3MTQ9HBK9 375 aa24.39■■□□□ 1.49
CIRBP-239ENST00000592467 PTCH2Q9Y6C5 1203 aa24.39■■□□□ 1.49
CIRBP-239ENST00000592467 BACE1P56817 501 aa24.38■■□□□ 1.49
CIRBP-239ENST00000592467 PI4K2BQ8TCG2 481 aa24.38■■□□□ 1.49
CIRBP-239ENST00000592467 TRIM34Q9BYJ4 488 aa24.38■■□□□ 1.49
CIRBP-239ENST00000592467 PUS7LQ9H0K6 701 aaKnown RBP24.38■■□□□ 1.49
CIRBP-239ENST00000592467 GH2P01242 217 aa24.37■■□□□ 1.49
CIRBP-239ENST00000592467 CYP2D6P10635 497 aa24.37■■□□□ 1.49
CIRBP-239ENST00000592467 HDAC1Q13547 482 aaPredicted RBP24.37■■□□□ 1.49
CIRBP-239ENST00000592467 MTMR2Q13614 643 aa24.37■■□□□ 1.49
CIRBP-239ENST00000592467 ARHGEF6Q15052 776 aa24.37■■□□□ 1.49
CIRBP-239ENST00000592467 KBTBD3Q8NAB2 608 aa24.37■■□□□ 1.49
CIRBP-239ENST00000592467 MCM9Q9NXL9 1143 aa24.37■■□□□ 1.49
CIRBP-239ENST00000592467 GNRH1P01148 92 aa24.36■■□□□ 1.49
CIRBP-239ENST00000592467 GUCY1A2P33402 732 aa24.36■■□□□ 1.49
CIRBP-239ENST00000592467 PSMC4P43686 418 aa24.36■■□□□ 1.49
CIRBP-239ENST00000592467 KIF22Q14807 665 aa24.36■■□□□ 1.49
CIRBP-239ENST00000592467 TTC41PQ6P2S7 1318 aa24.35■■□□□ 1.49
CIRBP-239ENST00000592467 SMIM22K7EJ46 135 aa24.35■■□□□ 1.49
CIRBP-239ENST00000592467 POLR3DP05423 398 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-239ENST00000592467 MLLT1Q03111 559 aaPredicted RBP24.35■■□□□ 1.49
CIRBP-239ENST00000592467 GPATCH3Q96I76 525 aa24.35■■□□□ 1.49
CIRBP-239ENST00000592467 ATP8A2Q9NTI2 1148 aa24.35■■□□□ 1.49
CIRBP-239ENST00000592467 MYH8P13535 1937 aa24.35■■□□□ 1.49
CIRBP-239ENST00000592467 ECM2O94769 699 aaPredicted RBP24.34■■□□□ 1.49
CIRBP-239ENST00000592467 OSBPP22059 807 aa24.34■■□□□ 1.49
CIRBP-239ENST00000592467 CERKLQ49MI3 558 aaPredicted RBP24.34■■□□□ 1.49
CIRBP-239ENST00000592467 ZSCAN25Q6NSZ9 544 aa24.34■■□□□ 1.49
CIRBP-239ENST00000592467 C19orf81C9J6K1 198 aa24.33■■□□□ 1.49
CIRBP-239ENST00000592467 USP17L10C9JJH3 530 aa24.33■■□□□ 1.49
CIRBP-239ENST00000592467 ZNF333Q96JL9 665 aa24.33■■□□□ 1.49
CIRBP-239ENST00000592467 ASCC2Q9H1I8 757 aaPredicted RBP24.33■■□□□ 1.49
CIRBP-239ENST00000592467 EMILIN3Q9NT22 766 aa24.33■■□□□ 1.49
CIRBP-239ENST00000592467 SRRDQ9UH36 339 aa24.33■■□□□ 1.49
CIRBP-239ENST00000592467 DOCK3Q8IZD9 2030 aa24.32■■□□□ 1.48
CIRBP-239ENST00000592467 HOXA7P31268 230 aaPredicted RBP24.32■■□□□ 1.48
CIRBP-239ENST00000592467 PRMT2P55345 433 aa24.32■■□□□ 1.48
CIRBP-239ENST00000592467 ABCB5Q2M3G0 1257 aa24.32■■□□□ 1.48
CIRBP-239ENST00000592467 SLC44A5Q8NCS7 719 aa24.32■■□□□ 1.48
CIRBP-239ENST00000592467 OSBP2Q969R2 916 aa24.32■■□□□ 1.48
CIRBP-239ENST00000592467 STRBPQ96SI9 672 aaKnown RBP24.32■■□□□ 1.48
CIRBP-239ENST00000592467 PNMA3Q9UL41 463 aa24.32■■□□□ 1.48
CIRBP-239ENST00000592467 AAMPQ13685 434 aa24.31■■□□□ 1.48
CIRBP-239ENST00000592467 C12orf60Q5U649 245 aa24.31■■□□□ 1.48
CIRBP-239ENST00000592467 ANKRD13CQ8N6S4 541 aa24.31■■□□□ 1.48
CIRBP-239ENST00000592467 SMCR8Q8TEV9 937 aaPredicted RBP24.31■■□□□ 1.48
CIRBP-239ENST00000592467 GCC1Q96CN9 775 aa24.31■■□□□ 1.48
CIRBP-239ENST00000592467 DYNLL2Q96FJ2 89 aa24.31■■□□□ 1.48
CIRBP-239ENST00000592467 CYP2D7A0A087X1C5 515 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 POTEFA5A3E0 1075 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 RNF113AO15541 343 aaKnown RBP24.3■■□□□ 1.48
CIRBP-239ENST00000592467 FMNL1O95466 1100 aaPredicted RBP24.3■■□□□ 1.48
CIRBP-239ENST00000592467 MX1P20591 662 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 PABPC4Q13310 644 aaKnown RBP eCLIP24.3■■□□□ 1.48
CIRBP-239ENST00000592467 FAM110CQ1W6H9 321 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 POTEEQ6S8J3 1075 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 ACER1Q8TDN7 264 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 APPBP2Q92624 585 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 C12orf42Q96LP6 360 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 TAOK2Q9UL54 1235 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 SLC4A4Q9Y6R1 1079 aa24.3■■□□□ 1.48
CIRBP-239ENST00000592467 GLRX3O76003 335 aaKnown RBP24.29■■□□□ 1.48
CIRBP-239ENST00000592467 FCGRTP55899 365 aa24.29■■□□□ 1.48
CIRBP-239ENST00000592467 ANKRD45Q5TZF3 282 aa24.29■■□□□ 1.48
CIRBP-239ENST00000592467 TMOD4Q9NZQ9 345 aa24.29■■□□□ 1.48
CIRBP-239ENST00000592467 GABRQQ9UN88 632 aa24.29■■□□□ 1.48
CIRBP-239ENST00000592467 MKI67P46013 3256 aaKnown RBP24.29■■□□□ 1.48
CIRBP-239ENST00000592467 USP17L12C9JPN9 530 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 USP17L21D6R901 530 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 GCLCP48506 637 aaPredicted RBP24.28■■□□□ 1.48
CIRBP-239ENST00000592467 PRKCZQ05513 592 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 SEPT2Q15019 361 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 RAB3GAP1Q15042 981 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 SLC9C1Q4G0N8 1177 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 CTR9Q6PD62 1173 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 USP17L2Q6R6M4 530 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 EXOC6Q8TAG9 804 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 SH3TC2Q8TF17 1288 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 P2RX7Q99572 595 aaKnown RBP24.28■■□□□ 1.48
CIRBP-239ENST00000592467 KIAA1683Q9H0B3 1180 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 SWAP70Q9UH65 585 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 MYPNQ86TC9 1320 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 PLXNB2O15031 1838 aa24.28■■□□□ 1.48
CIRBP-239ENST00000592467 KIAA0100Q14667 2235 aaKnown RBP24.27■■□□□ 1.48
CIRBP-239ENST00000592467 GSG1L2A8MUP6 293 aa24.27■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms