RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 CENPFP49454 3210 aa11.73□□□□□ -0.53
PRKCSH-215ENST00000592435 PLCD1P51178 756 aa11.73□□□□□ -0.53
PRKCSH-215ENST00000592435 MTMR2Q13614 643 aa11.73□□□□□ -0.53
PRKCSH-215ENST00000592435 TMEM106CQ9BVX2 250 aa11.73□□□□□ -0.53
PRKCSH-215ENST00000592435 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
PRKCSH-215ENST00000592435 TMOD4Q9NZQ9 345 aa11.73□□□□□ -0.53
PRKCSH-215ENST00000592435 ZBTB21Q9ULJ3 1066 aa11.73□□□□□ -0.53
PRKCSH-215ENST00000592435 MYO5AQ9Y4I1 1855 aaKnown RBP11.73□□□□□ -0.53
PRKCSH-215ENST00000592435 PHIPQ8WWQ0 1821 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 GDF11O95390 407 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 GH2P01242 217 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 RRP1P56182 461 aaKnown RBP11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 GABPAQ06546 454 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 UBE3CQ15386 1083 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 FAM110CQ1W6H9 321 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 SHROOM1Q2M3G4 852 aaPredicted RBP11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 SLC4A8Q2Y0W8 1093 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 CERKLQ49MI3 558 aaPredicted RBP11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 ZSCAN25Q6NSZ9 544 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 ANKRD13CQ8N6S4 541 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 RAET1EQ8TD07 263 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 GPATCH3Q96I76 525 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 ASCC2Q9H1I8 757 aaPredicted RBP11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 DCP1AQ9NPI6 582 aaPredicted RBP11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 ATP8A2Q9NTI2 1148 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 MCM9Q9NXL9 1143 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 PCDHB15Q9Y5E8 787 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 FOCADQ5VW36 1801 aa11.72□□□□□ -0.53
PRKCSH-215ENST00000592435 MYPNQ86TC9 1320 aa11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 ECM2O94769 699 aaPredicted RBP11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 GRK4P32298 578 aa11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 ABCB5Q2M3G0 1257 aa11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 LCORLQ8N3X6 602 aa11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 SH3TC2Q8TF17 1288 aa11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 SDR42E1Q8WUS8 393 aa11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 ARMT1Q9H993 441 aa11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 EMILIN3Q9NT22 766 aa11.71□□□□□ -0.53
PRKCSH-215ENST00000592435 SIPA1L1O43166 1804 aa11.71□□□□□ -0.54
PRKCSH-215ENST00000592435 TNPO2O14787 897 aaKnown RBP11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 EN2P19622 333 aaPredicted RBP11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 SHMT1P34896 483 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 IRX3P78415 501 aaPredicted RBP11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 PRKCZQ05513 592 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 IRF5Q13568 498 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L2Q6R6M4 530 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 C12orf42Q96LP6 360 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 KIAA1683Q9H0B3 1180 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 CABP5Q9NP86 173 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 MORF4L1Q9UBU8 362 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 GABRQQ9UN88 632 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 CDK5RAP2Q96SN8 1893 aa11.7□□□□□ -0.54
PRKCSH-215ENST00000592435 PTPRFP10586 1907 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 MBD4O95243 580 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 FLT3LGP49771 235 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 USP14P54578 494 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 RAB3GAP1Q15042 981 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 SLFNL1Q499Z3 407 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 KBTBD3Q8NAB2 608 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 SLAIN1Q8ND83 568 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 PXYLP1Q8TE99 480 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 COA7Q96BR5 231 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 P2RX7Q99572 595 aaKnown RBP11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 SWAP70Q9UH65 585 aa11.69□□□□□ -0.54
PRKCSH-215ENST00000592435 TTC41PQ6P2S7 1318 aa11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 PRKAB2O43741 272 aa11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 ADCY3O60266 1144 aa11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 ZFYP08048 801 aaPredicted RBP11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 HERVK_113P62684 666 aa11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 AAMPQ13685 434 aa11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 GTF3C2Q8WUA4 911 aaPredicted RBP11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 DDRGK1Q96HY6 314 aa11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 PUS7LQ9H0K6 701 aaKnown RBP11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 BIN2Q9UBW5 565 aaPredicted RBP11.68□□□□□ -0.54
PRKCSH-215ENST00000592435 LOC285556D6RIA3 1793 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L15C9J2P7 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L13C9JLJ4 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L12C9JPN9 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L11C9JVI0 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L21D6R901 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L18D6R9N7 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L22D6RA61 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L17D6RBQ6 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L19D6RCP7 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L20D6RJB6 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 CHGBP05060 677 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 CYP2D6P10635 497 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 UBXN2AP68543 259 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 EVX2Q03828 476 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 USP17L24Q0WX57 530 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 SEPT2Q15019 361 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 MTFR1Q15390 333 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 C12orf60Q5U649 245 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 PRPF38BQ5VTL8 546 aaKnown RBP11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 TMEM179Q6ZVK1 233 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 AMOTL1Q8IY63 956 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 GPRC5AQ8NFJ5 357 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 NKX2-3Q8TAU0 364 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 ACER1Q8TDN7 264 aa11.67□□□□□ -0.54
PRKCSH-215ENST00000592435 CCDC17Q96LX7 622 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms