RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 CRACR2BQ8N4Y2 399 aaPredicted RBP25.16■■□□□ 1.62
CIRBP-229ENST00000590704 ATAD5Q96QE3 1844 aa25.16■■□□□ 1.62
CIRBP-229ENST00000590704 ZBTB48P10074 688 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-229ENST00000590704 TDO2P48775 406 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 DSCC1Q9BVC3 393 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.15■■□□□ 1.62
CIRBP-229ENST00000590704 NAPBQ9H115 298 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 ANAPC4Q9UJX5 808 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 AFG3L2Q9Y4W6 797 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 ZMYM6O95789 1325 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 RAD50Q92878 1312 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 TESPA1A2RU30 521 aaPredicted RBP25.15■■□□□ 1.62
CIRBP-229ENST00000590704 PPATQ06203 517 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 PPARAQ07869 468 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 OTUD5Q96G74 571 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 PTPN18Q99952 460 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 ESYT1Q9BSJ8 1104 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 TAOK2Q9UL54 1235 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 KCNH4Q9UQ05 1017 aa25.15■■□□□ 1.62
CIRBP-229ENST00000590704 FGRP09769 529 aa25.14■■□□□ 1.61
CIRBP-229ENST00000590704 RASA1P20936 1047 aa25.14■■□□□ 1.61
CIRBP-229ENST00000590704 TM4SF4P48230 202 aa25.14■■□□□ 1.61
CIRBP-229ENST00000590704 PPIL2Q13356 520 aa25.14■■□□□ 1.61
CIRBP-229ENST00000590704 CERKLQ49MI3 558 aaPredicted RBP25.14■■□□□ 1.61
CIRBP-229ENST00000590704 SIAH1Q8IUQ4 282 aa25.14■■□□□ 1.61
CIRBP-229ENST00000590704 NACAP1Q9BZK3 213 aa25.14■■□□□ 1.61
CIRBP-229ENST00000590704 SWAP70Q9UH65 585 aa25.14■■□□□ 1.61
CIRBP-229ENST00000590704 ZBTB21Q9ULJ3 1066 aa25.14■■□□□ 1.61
CIRBP-229ENST00000590704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.14■■□□□ 1.61
CIRBP-229ENST00000590704 STK11IPQ8N1F8 1099 aa25.13■■□□□ 1.61
CIRBP-229ENST00000590704 DDRGK1Q96HY6 314 aa25.13■■□□□ 1.61
CIRBP-229ENST00000590704 ZHX2Q9Y6X8 837 aa25.13■■□□□ 1.61
CIRBP-229ENST00000590704 GH2P01242 217 aa25.12■■□□□ 1.61
CIRBP-229ENST00000590704 AKR1B1P15121 316 aa25.12■■□□□ 1.61
CIRBP-229ENST00000590704 CTDSPL2Q05D32 466 aa25.12■■□□□ 1.61
CIRBP-229ENST00000590704 MFAP1P55081 439 aaKnown RBP25.11■■□□□ 1.61
CIRBP-229ENST00000590704 RUFY2Q8WXA3 655 aa25.11■■□□□ 1.61
CIRBP-229ENST00000590704 LSG1Q9H089 658 aaKnown RBP25.11■■□□□ 1.61
CIRBP-229ENST00000590704 WBP1LQ9NX94 342 aa25.11■■□□□ 1.61
CIRBP-229ENST00000590704 PTPRFP10586 1907 aa25.11■■□□□ 1.61
CIRBP-229ENST00000590704 GREB1LQ9C091 1923 aaPredicted RBP25.11■■□□□ 1.61
CIRBP-229ENST00000590704 BRI3BPQ8WY22 251 aa25.1■■□□□ 1.61
CIRBP-229ENST00000590704 MAP4K1Q92918 833 aa25.1■■□□□ 1.61
CIRBP-229ENST00000590704 GINM1Q9NU53 330 aa25.1■■□□□ 1.61
CIRBP-229ENST00000590704 GTF3C3Q9Y5Q9 886 aa25.1■■□□□ 1.61
CIRBP-229ENST00000590704 ASNSP08243 561 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 WDR18Q9BV38 432 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 TAF6LQ9Y6J9 622 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 IGF2BP3O00425 579 aaKnown RBP eCLIP25.09■■□□□ 1.61
CIRBP-229ENST00000590704 CDC45O75419 566 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 PRDM1O75626 825 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 SEPT2Q15019 361 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 ABCB5Q2M3G0 1257 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 TBC1D10CQ8IV04 446 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 TRIM34Q9BYJ4 488 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 PICK1Q9NRD5 415 aa25.09■■□□□ 1.61
CIRBP-229ENST00000590704 USP17L5A8MUK1 530 aa25.08■■□□□ 1.6
CIRBP-229ENST00000590704 CXCL11O14625 94 aa25.08■■□□□ 1.6
CIRBP-229ENST00000590704 HAND2P61296 217 aa25.08■■□□□ 1.6
CIRBP-229ENST00000590704 DGKZQ13574 1117 aa25.08■■□□□ 1.6
CIRBP-229ENST00000590704 MYH8P13535 1937 aa25.07■■□□□ 1.6
CIRBP-229ENST00000590704 IGKV6D-41A0A0C4DH26 115 aa25.07■■□□□ 1.6
CIRBP-229ENST00000590704 A0A1W2PRG0 241 aa25.07■■□□□ 1.6
CIRBP-229ENST00000590704 MANSC4A6NHS7 340 aaPredicted RBP25.07■■□□□ 1.6
CIRBP-229ENST00000590704 SPP2Q13103 211 aa25.07■■□□□ 1.6
CIRBP-229ENST00000590704 CLEC10AQ8IUN9 316 aa25.07■■□□□ 1.6
CIRBP-229ENST00000590704 AMOTL1Q8IY63 956 aa25.07■■□□□ 1.6
CIRBP-229ENST00000590704 ACER1Q8TDN7 264 aa25.07■■□□□ 1.6
CIRBP-229ENST00000590704 CCDC17Q96LX7 622 aa25.07■■□□□ 1.6
CIRBP-229ENST00000590704 A0A0G2JLL6 359 aaPredicted RBP25.06■■□□□ 1.6
CIRBP-229ENST00000590704 GPAT2Q6NUI2 795 aa25.06■■□□□ 1.6
CIRBP-229ENST00000590704 PRRT2Q7Z6L0 340 aaPredicted RBP25.06■■□□□ 1.6
CIRBP-229ENST00000590704 ZNF280CQ8ND82 737 aa25.06■■□□□ 1.6
CIRBP-229ENST00000590704 GTF2A2P52657 109 aa25.05■■□□□ 1.6
CIRBP-229ENST00000590704 LAMA4Q16363 1823 aa25.04■■□□□ 1.6
CIRBP-229ENST00000590704 ORC4O43929 436 aa25.04■■□□□ 1.6
CIRBP-229ENST00000590704 SH3D19Q5HYK7 790 aa25.04■■□□□ 1.6
CIRBP-229ENST00000590704 IFNL1Q8IU54 200 aa25.04■■□□□ 1.6
CIRBP-229ENST00000590704 FAM43AQ8N2R8 423 aa25.04■■□□□ 1.6
CIRBP-229ENST00000590704 CCL15-CCL14A0A0B4J2E2 113 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 TRIM75PA6NK02 468 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 BTBD19C9JJ37 291 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 CYP21A2P08686 494 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 INHBEP58166 350 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 SNAPC2Q13487 334 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 CCL15Q16663 113 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 FAM47AQ5JRC9 791 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 TMEM179Q6ZVK1 233 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 STAG1Q8WVM7 1258 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 R3HDMLQ9H3Y0 253 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 RNF186Q9NXI6 227 aa25.03■■□□□ 1.6
CIRBP-229ENST00000590704 BACE1P56817 501 aa25.02■■□□□ 1.6
CIRBP-229ENST00000590704 RAB3GAP1Q15042 981 aa25.02■■□□□ 1.6
CIRBP-229ENST00000590704 NECTIN1Q15223 517 aa25.02■■□□□ 1.6
CIRBP-229ENST00000590704 KIAA1755Q5JYT7 1200 aa25.02■■□□□ 1.6
CIRBP-229ENST00000590704 AKNAD1Q5T1N1 836 aa25.02■■□□□ 1.6
CIRBP-229ENST00000590704 MKNK2Q9HBH9 465 aa25.02■■□□□ 1.6
CIRBP-229ENST00000590704 EMILIN3Q9NT22 766 aa25.02■■□□□ 1.6
CIRBP-229ENST00000590704 ZNF213O14771 459 aa25.02■■□□□ 1.6
CIRBP-229ENST00000590704 NOVP48745 357 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms