RNA–Protein interactions for RNA: ENST00000590574.5

SMARCA4-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,282 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-215ENST00000590574 RSPH14Q9UHP6 348 aa19.31■□□□□ 0.68
SMARCA4-215ENST00000590574 MAP3K15Q6ZN16 1313 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 SARM1Q6SZW1 724 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 SDR42E1Q8WUS8 393 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 IKBKBO14920 756 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 LETM2Q2VYF4 491 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 NELFBQ8WX92 580 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 RFC4P35249 363 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 TMTC1Q8IUR5 882 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 HSF2BPO75031 334 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 IVLP07476 585 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 CCDC144BQ3MJ40 725 aa19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 BCCIPQ9P287 314 aaKnown RBP eCLIP19.3■□□□□ 0.68
SMARCA4-215ENST00000590574 LDHBP07195 334 aaKnown RBP19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 KCNF1Q9H3M0 494 aa19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 WWC3Q9ULE0 1092 aa19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 NYXQ9GZU5 481 aa19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 KRT9P35527 623 aa19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 ANKRD2Q9GZV1 360 aa19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 SH2B2O14492 632 aaPredicted RBP19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 CYP27B1O15528 508 aa19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 CCDC87Q9NVE4 849 aa19.29■□□□□ 0.68
SMARCA4-215ENST00000590574 TNKSO95271 1327 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 PLCD1P51178 756 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 TBC1D8BQ0IIM8 1120 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 TSGA10IPQ3SY00 556 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 FAM47AQ5JRC9 791 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 SLF1Q9BQI6 1058 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 ASAP1Q9ULH1 1129 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 DMTNQ08495 405 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 PDE4DQ08499 809 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 PICALMQ13492 652 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 MAATS1Q7Z4T9 603 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 ZSCAN10Q96SZ4 725 aaPredicted RBP19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 NOC4LQ9BVI4 516 aaKnown RBP19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 NPHP4O75161 1426 aaPredicted RBP19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 OAS2P29728 719 aaKnown RBP19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 GNA11P29992 359 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 TUBB2AQ13885 445 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 ZNF804AQ7Z570 1209 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 TAX1BP1Q86VP1 789 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 TUBB2BQ9BVA1 445 aa19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 CEP170BQ9Y4F5 1589 aaPredicted RBP19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 FMNL1O95466 1100 aaPredicted RBP19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 HIBADHP31937 336 aaKnown RBP19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 SAP30BPQ9UHR5 308 aaKnown RBP19.28■□□□□ 0.68
SMARCA4-215ENST00000590574 SALL3Q9BXA9 1300 aa19.27■□□□□ 0.68
SMARCA4-215ENST00000590574 GPR161Q8N6U8 529 aaKnown RBP19.27■□□□□ 0.68
SMARCA4-215ENST00000590574 ARID5AQ03989 594 aa19.27■□□□□ 0.68
SMARCA4-215ENST00000590574 ITSN1Q15811 1721 aa19.27■□□□□ 0.68
SMARCA4-215ENST00000590574 TRIML1Q8N9V2 468 aa19.27■□□□□ 0.68
SMARCA4-215ENST00000590574 TUBBP07437 444 aa19.27■□□□□ 0.68
SMARCA4-215ENST00000590574 KRT79Q5XKE5 535 aa19.27■□□□□ 0.68
SMARCA4-215ENST00000590574 CSGALNACT2Q8N6G5 542 aa19.27■□□□□ 0.68
SMARCA4-215ENST00000590574 EFCAB8A8MWE9 144 aa19.27■□□□□ 0.67
SMARCA4-215ENST00000590574 CHGBP05060 677 aa19.27■□□□□ 0.67
SMARCA4-215ENST00000590574 SMARCC2Q8TAQ2 1214 aa19.27■□□□□ 0.67
SMARCA4-215ENST00000590574 TFCP2L1Q9NZI6 479 aa19.27■□□□□ 0.67
SMARCA4-215ENST00000590574 TPTE2Q6XPS3 522 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 CSRNP2Q9H175 543 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 USP8P40818 1118 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 TNNI2P48788 182 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 NCBP1Q09161 790 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 IFFO1Q0D2I5 559 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 STOX1Q6ZVD7 989 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 CUL5Q93034 780 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 RFX7Q2KHR2 1363 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 NEK11Q8NG66 645 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 GOPCQ9HD26 462 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 PARP1P09874 1014 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 ATP1A3P13637 1013 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 GIGYF2Q6Y7W6 1299 aaKnown RBP19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 NBPF11Q86T75 865 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 TAF6LQ9Y6J9 622 aa19.26■□□□□ 0.67
SMARCA4-215ENST00000590574 F8W031 263 aaPredicted RBP19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 CCNT1O60563 726 aaKnown RBP19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 GRAMD1CQ8IYS0 662 aa19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 NGLY1Q96IV0 654 aa19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 FAM107BQ9H098 131 aa19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 PODXL2Q9NZ53 605 aa19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 ADAMTS13Q76LX8 1427 aa19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 SPAG5Q96R06 1193 aa19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 SYMPKQ92797 1274 aaKnown RBP19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 JAKMIP2Q96AA8 810 aa19.25■□□□□ 0.67
SMARCA4-215ENST00000590574 GYG1P46976 350 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 SV2BQ7L1I2 683 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 FMR1NBQ8N0W7 255 aaPredicted RBP19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 PIH1D3Q9NQM4 214 aaKnown RBP19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 TMEM94Q12767 1356 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 RNF187Q5TA31 235 aaPredicted RBP19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 TSGA10Q9BZW7 698 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 FOXP1Q9H334 677 aaPredicted RBP19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 STX10O60499 249 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 HLA-DOAP06340 250 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 DHX40Q8IX18 779 aaKnown RBP19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 MAN1B1Q9UKM7 699 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 AK9Q5TCS8 1911 aa19.24■□□□□ 0.67
SMARCA4-215ENST00000590574 USP17L12C9JPN9 530 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms