RNA–Protein interactions for RNA: ENST00000590205.2

CACNA1A-210, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 3,340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-210ENST00000590205 CNBD1Q8NA66 436 aa9.56□□□□□ -0.88
CACNA1A-210ENST00000590205 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.56□□□□□ -0.88
CACNA1A-210ENST00000590205 INTS13Q9NVM9 706 aa9.56□□□□□ -0.88
CACNA1A-210ENST00000590205 IFNAR1P17181 557 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 GABPB1Q06547 395 aaPredicted RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 CHAF1AQ13111 956 aaPredicted RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 TPTE2Q6XPS3 522 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 BICDL1Q6ZP65 573 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 METTL16Q86W50 562 aaKnown RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 C8orf76Q96K31 380 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 PPP1R13BQ96KQ4 1090 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 EPB41L4AQ9HCS5 686 aaPredicted RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 PIH1D3Q9NQM4 214 aaKnown RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 SKILP12757 684 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 YBX3P16989 372 aaKnown RBP eCLIP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 PBX1P40424 430 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 TOB1P50616 345 aaPredicted RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 CCT2P78371 535 aaKnown RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 PPP4R3BQ5MIZ7 849 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 C3orf67Q6ZVT6 689 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 FOXP4Q8IVH2 680 aaPredicted RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 VSTM4Q8IW00 320 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 REXO1L1PQ8IX06 675 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 TRIML1Q8N9V2 468 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 TSC1Q92574 1164 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 FOXP1Q9H334 677 aaPredicted RBP9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 NAV1Q8NEY1 1877 aa9.55□□□□□ -0.88
CACNA1A-210ENST00000590205 KLF18A0A0U1RQI7 1052 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 CDKL5O76039 1030 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 KIF20AO95235 890 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 UQCRFS1P1P0C7P4 283 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 DPEP1P16444 411 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 HOXA10P31260 410 aaPredicted RBP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 FUT2Q10981 343 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 NBPF5PQ86XG9 351 aaPredicted RBP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 STK11IPQ8N1F8 1099 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 MSL3Q8N5Y2 521 aaKnown RBP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 AOPEPQ8N6M6 819 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 PPP1R1BQ9UD71 204 aaPredicted RBP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 FBXO2Q9UK22 296 aaPredicted RBP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 ZRANB2O95218 330 aaKnown RBP eCLIP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 GPTP24298 496 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 CCDC57Q2TAC2 916 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 TTC39AQ5SRH9 613 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 STYK1Q6J9G0 422 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 CCDC112Q8NEF3 446 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 C7orf43Q8WVR3 580 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 TNFRSF25Q93038 417 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 SHISA4Q96DD7 197 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 UTP14AQ9BVJ6 771 aaKnown RBP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 PSME4Q14997 1843 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 ZNF213O14771 459 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 PDE6BP35913 854 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 NT5C2P49902 561 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 MORC3Q14149 939 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 PPP2R5BQ15173 497 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 SYNE4Q8N205 404 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 MED15Q96RN5 788 aa9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 XPO4Q9C0E2 1151 aaKnown RBP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 ORC3Q9UBD5 711 aaPredicted RBP9.54□□□□□ -0.88
CACNA1A-210ENST00000590205 GREB1LQ9C091 1923 aaPredicted RBP9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 A0A1B0GVL5 298 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 GOLGA6L19H0YKK7 550 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 MMP1P03956 469 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 PTPREP23469 700 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 ST5P78524 1137 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 SEC23AQ15436 765 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 ZNF397Q8NF99 534 aaPredicted RBP9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 BAZ2AQ9UIF9 1905 aaKnown RBP9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 VGLL3A8MV65 326 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 PDE8AO60658 829 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 PDE6AP16499 860 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 KMT5BQ4FZB7 885 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 KRT40Q6A162 431 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 KRBA2Q6ZNG9 492 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 VPS37DQ86XT2 251 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 LPIN2Q92539 896 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 ZNF446Q9NWS9 450 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 IRS2Q9Y4H2 1338 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 CHRNA5P30532 468 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 IFIT5Q13325 482 aaKnown RBP9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 NEUROD6Q96NK8 337 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 GREM2Q9H772 168 aa9.53□□□□□ -0.88
CACNA1A-210ENST00000590205 GOLGA8BA8MQT2 603 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 GSG1L2A8MUP6 293 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 ATP8B1O43520 1251 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 SLC3A2P08195 630 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 ITGA6P23229 1130 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 ME1P48163 572 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 SF3B3Q15393 1217 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 CCDC102BQ68D86 513 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 ENOX1Q8TC92 643 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 CNNM2Q9H8M5 875 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 SEMA3EO15041 775 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 CCP110O43303 1012 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 ACTN4O43707 911 aaKnown RBP9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 SLFN14P0C7P3 912 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 GNAT2P19087 354 aa9.52□□□□□ -0.89
CACNA1A-210ENST00000590205 PUM3Q15397 648 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms