RNA–Protein interactions for RNA: ENST00000589941.1

SMAD4-209, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-209ENST00000589941 MX2P20592 715 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 FGFR3P22607 806 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 CANXP27824 592 aaKnown RBP10.63□□□□□ -0.71
SMAD4-209ENST00000589941 SLC39A6Q13433 755 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 GRIN2CQ14957 1233 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 SYNE4Q8N205 404 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 CNBD1Q8NA66 436 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 MASTLQ96GX5 879 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 PUS7Q96PZ0 661 aaKnown RBP10.63□□□□□ -0.71
SMAD4-209ENST00000589941 SIN3AQ96ST3 1273 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 RNF186Q9NXI6 227 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 ANKIB1Q9P2G1 1089 aa10.63□□□□□ -0.71
SMAD4-209ENST00000589941 DMGDHQ9UI17 866 aaKnown RBP10.63□□□□□ -0.71
SMAD4-209ENST00000589941 HSP90AB1P08238 724 aaKnown RBP10.62□□□□□ -0.71
SMAD4-209ENST00000589941 CD33P20138 364 aa10.62□□□□□ -0.71
SMAD4-209ENST00000589941 TYRO3Q06418 890 aa10.62□□□□□ -0.71
SMAD4-209ENST00000589941 NOGQ13253 232 aa10.62□□□□□ -0.71
SMAD4-209ENST00000589941 FAM26DQ5JW98 314 aa10.62□□□□□ -0.71
SMAD4-209ENST00000589941 AEBP1Q8IUX7 1158 aa10.62□□□□□ -0.71
SMAD4-209ENST00000589941 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.62□□□□□ -0.71
SMAD4-209ENST00000589941 SAGE1Q9NXZ1 904 aa10.62□□□□□ -0.71
SMAD4-209ENST00000589941 LAMB4A4D0S4 1761 aa10.62□□□□□ -0.71
SMAD4-209ENST00000589941 UNC80Q8N2C7 3258 aa10.62□□□□□ -0.71
SMAD4-209ENST00000589941 ST20-MTHFSA0A0A6YYL1 179 aa10.61□□□□□ -0.71
SMAD4-209ENST00000589941 MTHFSP49914 203 aa10.61□□□□□ -0.71
SMAD4-209ENST00000589941 SRSF11Q05519 484 aaKnown RBP10.61□□□□□ -0.71
SMAD4-209ENST00000589941 SFSWAPQ12872 951 aaKnown RBP10.61□□□□□ -0.71
SMAD4-209ENST00000589941 C11orf91Q3C1V1 193 aa10.61□□□□□ -0.71
SMAD4-209ENST00000589941 C16orf46Q6P387 395 aa10.61□□□□□ -0.71
SMAD4-209ENST00000589941 USP50Q70EL3 339 aaPredicted RBP10.61□□□□□ -0.71
SMAD4-209ENST00000589941 BTLAQ7Z6A9 289 aa10.61□□□□□ -0.71
SMAD4-209ENST00000589941 CEP63Q96MT8 703 aa10.61□□□□□ -0.71
SMAD4-209ENST00000589941 LAMB2P55268 1798 aa10.6□□□□□ -0.71
SMAD4-209ENST00000589941 TGFBR3LH3BV60 316 aa10.6□□□□□ -0.71
SMAD4-209ENST00000589941 TNFRSF10BO14763 440 aa10.6□□□□□ -0.71
SMAD4-209ENST00000589941 EIF5P55010 431 aaKnown RBP10.6□□□□□ -0.71
SMAD4-209ENST00000589941 HUNKP57058 714 aa10.6□□□□□ -0.71
SMAD4-209ENST00000589941 KIF23Q02241 960 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-209ENST00000589941 WHAMMQ8TF30 809 aa10.6□□□□□ -0.71
SMAD4-209ENST00000589941 SLURP2P0DP57 97 aa10.59□□□□□ -0.71
SMAD4-209ENST00000589941 IER5Q5VY09 327 aa10.59□□□□□ -0.71
SMAD4-209ENST00000589941 BRD7Q9NPI1 651 aa10.59□□□□□ -0.71
SMAD4-209ENST00000589941 POLKQ9UBT6 870 aa10.59□□□□□ -0.71
SMAD4-209ENST00000589941 SHTN1A0MZ66 631 aa10.58□□□□□ -0.72
SMAD4-209ENST00000589941 ST5P78524 1137 aa10.58□□□□□ -0.72
SMAD4-209ENST00000589941 HIF1AQ16665 826 aa10.58□□□□□ -0.72
SMAD4-209ENST00000589941 PLEKHO1Q53GL0 409 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-209ENST00000589941 DIEXFQ68CQ4 756 aaKnown RBP10.58□□□□□ -0.72
SMAD4-209ENST00000589941 TRPM4Q8TD43 1214 aa10.58□□□□□ -0.72
SMAD4-209ENST00000589941 IFT43Q96FT9 208 aa10.58□□□□□ -0.72
SMAD4-209ENST00000589941 KIAA0100Q14667 2235 aaKnown RBP10.58□□□□□ -0.72
SMAD4-209ENST00000589941 NUP98P52948 1817 aa10.58□□□□□ -0.72
SMAD4-209ENST00000589941 CAMTA2O94983 1202 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 BMP4P12644 408 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 NPR1P16066 1061 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 GRNP28799 593 aaKnown RBP10.57□□□□□ -0.72
SMAD4-209ENST00000589941 EIF6P56537 245 aaKnown RBP10.57□□□□□ -0.72
SMAD4-209ENST00000589941 AKAP4Q5JQC9 854 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 ETFBKMTQ8IXQ9 262 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 SLC17A8Q8NDX2 589 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 LGR6Q9HBX8 967 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 ADARB2Q9NS39 739 aaKnown RBP10.57□□□□□ -0.72
SMAD4-209ENST00000589941 GPRC5DQ9NZD1 345 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 MARK1Q9P0L2 795 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 TAF1P21675 1872 aa10.57□□□□□ -0.72
SMAD4-209ENST00000589941 ABCC12Q96J65 1359 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 NPHP1O15259 732 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 MICAL2O94851 1124 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 IDH3AP50213 366 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 LAMC2Q13753 1193 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 C1orf141Q5JVX7 400 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 RGMBQ6NW40 437 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 LYPD4Q6UWN0 246 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 RTKN2Q8IZC4 609 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 JDP2Q8WYK2 163 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 ACDQ96AP0 544 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 PSMD1Q99460 953 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 SLC52A2Q9HAB3 445 aa10.56□□□□□ -0.72
SMAD4-209ENST00000589941 INPP5BP32019 993 aa10.55□□□□□ -0.72
SMAD4-209ENST00000589941 INSM1Q01101 510 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-209ENST00000589941 NEUROD1Q13562 356 aa10.55□□□□□ -0.72
SMAD4-209ENST00000589941 TREML1Q86YW5 311 aa10.55□□□□□ -0.72
SMAD4-209ENST00000589941 ZSCAN1Q8NBB4 408 aa10.55□□□□□ -0.72
SMAD4-209ENST00000589941 ZNF296Q8WUU4 475 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-209ENST00000589941 CSRNP1Q96S65 589 aa10.55□□□□□ -0.72
SMAD4-209ENST00000589941 SLC30A3Q99726 388 aa10.55□□□□□ -0.72
SMAD4-209ENST00000589941 DUOX1Q9NRD9 1551 aa10.55□□□□□ -0.72
SMAD4-209ENST00000589941 LAMB1P07942 1786 aa10.54□□□□□ -0.72
SMAD4-209ENST00000589941 KLRG2A4D1S0 409 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-209ENST00000589941 OPLAHO14841 1288 aa10.54□□□□□ -0.72
SMAD4-209ENST00000589941 CENPBP07199 599 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-209ENST00000589941 MAP2K3P46734 347 aa10.54□□□□□ -0.72
SMAD4-209ENST00000589941 GMPSP49915 693 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-209ENST00000589941 ZNF385CQ66K41 422 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-209ENST00000589941 DDX60Q8IY21 1712 aaKnown RBP10.54□□□□□ -0.72
SMAD4-209ENST00000589941 GTF3C2Q8WUA4 911 aaPredicted RBP10.54□□□□□ -0.72
SMAD4-209ENST00000589941 SETDB2Q96T68 719 aa10.54□□□□□ -0.72
SMAD4-209ENST00000589941 PGAP2Q9UHJ9 254 aa10.54□□□□□ -0.72
SMAD4-209ENST00000589941 NSFL1CQ9UNZ2 370 aaKnown RBP10.54□□□□□ -0.72
SMAD4-209ENST00000589941 KCNH4Q9UQ05 1017 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms