RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 FGRP09769 529 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 CAP2P40123 477 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 NT5C2P49902 561 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 KRT32Q14532 448 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 ABCB5Q2M3G0 1257 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 RALYLQ86SE5 291 aaKnown RBP16.12■□□□□ 0.17
VMP1-210ENST00000589823 ESR2Q92731 530 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 KRT23Q9C075 422 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 INCENPQ9NQS7 918 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 PICK1Q9NRD5 415 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 GINM1Q9NU53 330 aa16.12■□□□□ 0.17
VMP1-210ENST00000589823 TSPY2A6NKD2 308 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 RANBP6O60518 1105 aaKnown RBP16.11■□□□□ 0.17
VMP1-210ENST00000589823 RASA1P20936 1047 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 APLP1P51693 650 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 HUNKP57058 714 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 VGLL4Q14135 290 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 NOL9Q5SY16 702 aaKnown RBP16.11■□□□□ 0.17
VMP1-210ENST00000589823 LDLRAD1Q5T700 205 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 ZKSCAN4Q969J2 545 aaPredicted RBP16.11■□□□□ 0.17
VMP1-210ENST00000589823 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.11■□□□□ 0.17
VMP1-210ENST00000589823 ABT1Q9ULW3 272 aaKnown RBP16.11■□□□□ 0.17
VMP1-210ENST00000589823 TACC3Q9Y6A5 838 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 NEDD4P46934 1319 aa16.11■□□□□ 0.17
VMP1-210ENST00000589823 GH2P01242 217 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 ASNSP08243 561 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 TSPY3P0CV98 308 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 TSPY8P0CW00 308 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 AKR1B1P15121 316 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 TFAP4Q01664 338 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 RRP1BQ14684 758 aaKnown RBP16.1■□□□□ 0.17
VMP1-210ENST00000589823 TSGA10IPQ3SY00 556 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.1■□□□□ 0.17
VMP1-210ENST00000589823 TMEM179Q6ZVK1 233 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 NCOA7Q8NI08 942 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 KCNB2Q92953 911 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 SNX14Q9Y5W7 946 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 TLL2Q9Y6L7 1015 aa16.1■□□□□ 0.17
VMP1-210ENST00000589823 B4E1Z4 1266 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 FAM47AQ5JRC9 791 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 STOX1Q6ZVD7 989 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 SAPCD2Q86UD0 394 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 RASEFQ8IZ41 740 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 SLC10A4Q96EP9 437 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 ELP3Q9H9T3 547 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 CREBZFQ9NS37 354 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 ZBTB21Q9ULJ3 1066 aa16.09■□□□□ 0.17
VMP1-210ENST00000589823 MYH8P13535 1937 aa16.08■□□□□ 0.16
VMP1-210ENST00000589823 KDM4AO75164 1064 aa16.08■□□□□ 0.16
VMP1-210ENST00000589823 RAB3GAP1Q15042 981 aa16.08■□□□□ 0.16
VMP1-210ENST00000589823 NEDD1Q8NHV4 660 aa16.08■□□□□ 0.16
VMP1-210ENST00000589823 CLMNQ96JQ2 1002 aa16.08■□□□□ 0.16
VMP1-210ENST00000589823 C22orf23Q9BZE7 217 aa16.08■□□□□ 0.16
VMP1-210ENST00000589823 SNCAIPQ9Y6H5 919 aa16.08■□□□□ 0.16
VMP1-210ENST00000589823 USP17L5A8MUK1 530 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 PTPRAP18433 802 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 PSMA5P28066 241 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 ANAPC15P60006 121 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 C1QTNF8P60827 252 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 JAG1P78504 1218 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 SEPT2Q15019 361 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 PPP4R3BQ5MIZ7 849 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 ERO1BQ86YB8 467 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 NEK1Q96PY6 1258 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 TBC1D2Q9BYX2 928 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 AS3MTQ9HBK9 375 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 PLIN4Q96Q06 1357 aa16.07■□□□□ 0.16
VMP1-210ENST00000589823 OTOFQ9HC10 1997 aa16.06■□□□□ 0.16
VMP1-210ENST00000589823 DOCK1Q14185 1865 aa16.06■□□□□ 0.16
VMP1-210ENST00000589823 HMGB1P09429 215 aaKnown RBP16.06■□□□□ 0.16
VMP1-210ENST00000589823 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
VMP1-210ENST00000589823 SHROOM1Q2M3G4 852 aaPredicted RBP16.06■□□□□ 0.16
VMP1-210ENST00000589823 ADCK5Q3MIX3 580 aa16.06■□□□□ 0.16
VMP1-210ENST00000589823 CCDC178Q5BJE1 867 aa16.06■□□□□ 0.16
VMP1-210ENST00000589823 RGMBQ6NW40 437 aa16.06■□□□□ 0.16
VMP1-210ENST00000589823 HHIPL1Q96JK4 782 aa16.06■□□□□ 0.16
VMP1-210ENST00000589823 JAKMIP1Q96N16 626 aaKnown RBP16.06■□□□□ 0.16
VMP1-210ENST00000589823 KANSL2Q9H9L4 492 aa16.06■□□□□ 0.16
VMP1-210ENST00000589823 ZSWIM5Q9P217 1185 aa16.06■□□□□ 0.16
VMP1-210ENST00000589823 SPDYE5A6NIY4 337 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 GUCY1A2P33402 732 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 MCM5P33992 734 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 ICA1Q05084 483 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 PPATQ06203 517 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 SART3Q15020 963 aaKnown RBP16.05■□□□□ 0.16
VMP1-210ENST00000589823 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
VMP1-210ENST00000589823 MB21D2Q8IYB1 491 aaPredicted RBP16.05■□□□□ 0.16
VMP1-210ENST00000589823 OPTNQ96CV9 577 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 OTUD5Q96G74 571 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 UBAC1Q9BSL1 405 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 TCP11L1Q9NUJ3 509 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.05■□□□□ 0.16
VMP1-210ENST00000589823 ZHX2Q9Y6X8 837 aa16.05■□□□□ 0.16
VMP1-210ENST00000589823 ATAD5Q96QE3 1844 aa16.04■□□□□ 0.16
VMP1-210ENST00000589823 IGKV6D-41A0A0C4DH26 115 aa16.04■□□□□ 0.16
VMP1-210ENST00000589823 ERICH2A1L162 156 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms