RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 FAM110CQ1W6H9 321 aa17.44■□□□□ 0.38
MBD1-220ENST00000589758 TTC6Q86TZ1 520 aa17.44■□□□□ 0.38
MBD1-220ENST00000589758 SIRT2Q8IXJ6 389 aa17.44■□□□□ 0.38
MBD1-220ENST00000589758 COA7Q96BR5 231 aa17.44■□□□□ 0.38
MBD1-220ENST00000589758 EHD4Q9H223 541 aa17.44■□□□□ 0.38
MBD1-220ENST00000589758 BIN2Q9UBW5 565 aaPredicted RBP17.44■□□□□ 0.38
MBD1-220ENST00000589758 GABRQQ9UN88 632 aa17.44■□□□□ 0.38
MBD1-220ENST00000589758 MYH1P12882 1939 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 APBB1O00213 710 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 FLT3LGP49771 235 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 IRF5Q13568 498 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 MTMR2Q13614 643 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 MTFR1Q15390 333 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 GCC1Q96CN9 775 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 ASCC2Q9H1I8 757 aaPredicted RBP17.43■□□□□ 0.38
MBD1-220ENST00000589758 ZBTB21Q9ULJ3 1066 aa17.43■□□□□ 0.38
MBD1-220ENST00000589758 USP17L10C9JJH3 530 aa17.42■□□□□ 0.38
MBD1-220ENST00000589758 ADCY3O60266 1144 aa17.42■□□□□ 0.38
MBD1-220ENST00000589758 GDF11O95390 407 aa17.42■□□□□ 0.38
MBD1-220ENST00000589758 HOXA7P31268 230 aaPredicted RBP17.42■□□□□ 0.38
MBD1-220ENST00000589758 JAG1P78504 1218 aa17.42■□□□□ 0.38
MBD1-220ENST00000589758 SLC9C2Q5TAH2 1124 aa17.42■□□□□ 0.38
MBD1-220ENST00000589758 TATDN1Q6P1N9 297 aa17.42■□□□□ 0.38
MBD1-220ENST00000589758 PXYLP1Q8TE99 480 aa17.42■□□□□ 0.38
MBD1-220ENST00000589758 RIOK1Q9BRS2 568 aaKnown RBP17.42■□□□□ 0.38
MBD1-220ENST00000589758 SERPINB13Q9UIV8 391 aa17.42■□□□□ 0.38
MBD1-220ENST00000589758 MAGEB6P1A0A0J9YX57 407 aa17.41■□□□□ 0.38
MBD1-220ENST00000589758 GJB1P08034 283 aa17.41■□□□□ 0.38
MBD1-220ENST00000589758 CCL5P13501 91 aa17.41■□□□□ 0.38
MBD1-220ENST00000589758 IRX3P78415 501 aaPredicted RBP17.41■□□□□ 0.38
MBD1-220ENST00000589758 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
MBD1-220ENST00000589758 CRNKL1Q9BZJ0 848 aaKnown RBP17.41■□□□□ 0.38
MBD1-220ENST00000589758 GOLIM4O00461 696 aa17.4■□□□□ 0.38
MBD1-220ENST00000589758 PDE6AP16499 860 aa17.4■□□□□ 0.38
MBD1-220ENST00000589758 CAPN2P17655 700 aa17.4■□□□□ 0.38
MBD1-220ENST00000589758 GJA8P48165 433 aa17.4■□□□□ 0.38
MBD1-220ENST00000589758 RNF208Q9H0X6 261 aa17.4■□□□□ 0.38
MBD1-220ENST00000589758 MORF4L1Q9UBU8 362 aa17.4■□□□□ 0.38
MBD1-220ENST00000589758 CENPFP49454 3210 aa17.39■□□□□ 0.37
MBD1-220ENST00000589758 GH2P01242 217 aa17.39■□□□□ 0.37
MBD1-220ENST00000589758 POLR3DP05423 398 aaPredicted RBP17.39■□□□□ 0.37
MBD1-220ENST00000589758 ATP5JP18859 108 aa17.39■□□□□ 0.37
MBD1-220ENST00000589758 ZNF532Q9HCE3 1301 aa17.39■□□□□ 0.37
MBD1-220ENST00000589758 CERKLQ49MI3 558 aaPredicted RBP17.38■□□□□ 0.37
MBD1-220ENST00000589758 USP17L2Q6R6M4 530 aa17.38■□□□□ 0.37
MBD1-220ENST00000589758 GTF3C2Q8WUA4 911 aaPredicted RBP17.38■□□□□ 0.37
MBD1-220ENST00000589758 P2RX7Q99572 595 aaKnown RBP17.38■□□□□ 0.37
MBD1-220ENST00000589758 BCL11AQ9H165 835 aa17.38■□□□□ 0.37
MBD1-220ENST00000589758 CABP5Q9NP86 173 aa17.38■□□□□ 0.37
MBD1-220ENST00000589758 PAG1Q9NWQ8 432 aa17.38■□□□□ 0.37
MBD1-220ENST00000589758 TCRBV5S4A2TA0A5A2 114 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 INHAP05111 366 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 ELNP15502 786 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 USP14P54578 494 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 ABCB5Q2M3G0 1257 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 SHROOM1Q2M3G4 852 aaPredicted RBP17.37■□□□□ 0.37
MBD1-220ENST00000589758 C20orf194Q5TEA3 1177 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 SHISA4Q96DD7 197 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 LRRCC1Q9C099 1032 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.37■□□□□ 0.373e-9■■■■■ 39.5
MBD1-220ENST00000589758 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 EMILIN3Q9NT22 766 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 MCM9Q9NXL9 1143 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 TAOK2Q9UL54 1235 aa17.37■□□□□ 0.37
MBD1-220ENST00000589758 PLCD1P51178 756 aa17.36■□□□□ 0.37
MBD1-220ENST00000589758 HERVK_113P62684 666 aa17.36■□□□□ 0.37
MBD1-220ENST00000589758 RAB3GAP1Q15042 981 aa17.36■□□□□ 0.37
MBD1-220ENST00000589758 GPRC5AQ8NFJ5 357 aa17.36■□□□□ 0.37
MBD1-220ENST00000589758 U2AF1L4Q8WU68 220 aaKnown RBP17.36■□□□□ 0.37
MBD1-220ENST00000589758 C12orf42Q96LP6 360 aa17.36■□□□□ 0.37
MBD1-220ENST00000589758 FEZ1Q99689 392 aa17.36■□□□□ 0.37
MBD1-220ENST00000589758 HAUS7Q99871 368 aa17.36■□□□□ 0.37
MBD1-220ENST00000589758 UNC93B1Q9H1C4 597 aa17.36■□□□□ 0.37
MBD1-220ENST00000589758 NAV1Q8NEY1 1877 aa17.35■□□□□ 0.37
MBD1-220ENST00000589758 SGPL1O95470 568 aa17.35■□□□□ 0.37
MBD1-220ENST00000589758 SHMT1P34896 483 aa17.35■□□□□ 0.37
MBD1-220ENST00000589758 ADD2P35612 726 aa17.35■□□□□ 0.37
MBD1-220ENST00000589758 EDC3Q96F86 508 aaKnown RBP17.35■□□□□ 0.37
MBD1-220ENST00000589758 KIAA1683Q9H0B3 1180 aa17.35■□□□□ 0.37
MBD1-220ENST00000589758 GJD2Q9UKL4 321 aa17.35■□□□□ 0.37
MBD1-220ENST00000589758 DDX60LQ5H9U9 1706 aaKnown RBP17.35■□□□□ 0.37
MBD1-220ENST00000589758 DOCK3Q8IZD9 2030 aa17.35■□□□□ 0.37
MBD1-220ENST00000589758 BRCA2P51587 3418 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L15C9J2P7 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L13C9JLJ4 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L11C9JVI0 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L18D6R9N7 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L22D6RA61 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L17D6RBQ6 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L19D6RCP7 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L20D6RJB6 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 GABPAQ06546 454 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 USP17L24Q0WX57 530 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 LCORLQ8N3X6 602 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 HTATIP2Q9BUP3 242 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 DCP1AQ9NPI6 582 aaPredicted RBP17.34■□□□□ 0.37
MBD1-220ENST00000589758 ATP8A2Q9NTI2 1148 aa17.34■□□□□ 0.37
MBD1-220ENST00000589758 SWAP70Q9UH65 585 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms