RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 TBC1D32Q96NH3 1257 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 NEK1Q96PY6 1258 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 WRNIP1Q96S55 665 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 ZNF112Q9UJU3 913 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 ANGEL1Q9UNK9 670 aaKnown RBP17.95■□□□□ 0.46
ATG4D-211ENST00000589753 MYH8P13535 1937 aa17.95■□□□□ 0.46
ATG4D-211ENST00000589753 TSPY2A6NKD2 308 aa17.94■□□□□ 0.46
ATG4D-211ENST00000589753 GDF11O95390 407 aa17.94■□□□□ 0.46
ATG4D-211ENST00000589753 PSMA5P28066 241 aa17.94■□□□□ 0.46
ATG4D-211ENST00000589753 CAP2P40123 477 aa17.94■□□□□ 0.46
ATG4D-211ENST00000589753 RRP1BQ14684 758 aaKnown RBP17.94■□□□□ 0.46
ATG4D-211ENST00000589753 MAP3K11Q16584 847 aa17.94■□□□□ 0.46
ATG4D-211ENST00000589753 FAM47AQ5JRC9 791 aa17.94■□□□□ 0.46
ATG4D-211ENST00000589753 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.94■□□□□ 0.461e-19■□□□□ 9.9
ATG4D-211ENST00000589753 JAKMIP1Q96N16 626 aaKnown RBP17.94■□□□□ 0.46
ATG4D-211ENST00000589753 GBA2Q9HCG7 927 aaPredicted RBP17.94■□□□□ 0.46
ATG4D-211ENST00000589753 MPHOSPH10O00566 681 aaKnown RBP17.93■□□□□ 0.46
ATG4D-211ENST00000589753 CTNND1O60716 968 aaKnown RBP17.93■□□□□ 0.46
ATG4D-211ENST00000589753 KDM4AO75164 1064 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 TSPY3P0CV98 308 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 TSPY8P0CW00 308 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 AKR1B1P15121 316 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 FKBP1BP68106 108 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 TFAP4Q01664 338 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 ABCB5Q2M3G0 1257 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 C2orf69Q8N8R5 385 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 IL17RAQ96F46 866 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 CABP5Q9NP86 173 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 PAPPA2Q9BXP8 1791 aa17.93■□□□□ 0.46
ATG4D-211ENST00000589753 TRPM7Q96QT4 1865 aa17.92■□□□□ 0.46
ATG4D-211ENST00000589753 HMGB1P09429 215 aaKnown RBP17.92■□□□□ 0.46
ATG4D-211ENST00000589753 INPP5BP32019 993 aa17.92■□□□□ 0.46
ATG4D-211ENST00000589753 MAP3K9P80192 1104 aa17.92■□□□□ 0.46
ATG4D-211ENST00000589753 CST9Q5W186 159 aa17.92■□□□□ 0.46
ATG4D-211ENST00000589753 MOB2Q70IA6 237 aa17.92■□□□□ 0.46
ATG4D-211ENST00000589753 MB21D2Q8IYB1 491 aaPredicted RBP17.92■□□□□ 0.46
ATG4D-211ENST00000589753 NKX2-3Q8TAU0 364 aa17.92■□□□□ 0.46
ATG4D-211ENST00000589753 TM6SF1Q9BZW5 370 aa17.92■□□□□ 0.46
ATG4D-211ENST00000589753 ZSWIM5Q9P217 1185 aa17.92■□□□□ 0.46
ATG4D-211ENST00000589753 GH2P01242 217 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 CASTP20810 708 aaKnown RBP17.91■□□□□ 0.46
ATG4D-211ENST00000589753 MCM5P33992 734 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 BLOC1S2Q6QNY1 142 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 TMEM179Q6ZVK1 233 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 ANKRD13AQ8IZ07 590 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 SCYL3Q8IZE3 742 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 NEDD1Q8NHV4 660 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 ZKSCAN4Q969J2 545 aaPredicted RBP17.91■□□□□ 0.46
ATG4D-211ENST00000589753 GINM1Q9NU53 330 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 ZBTB21Q9ULJ3 1066 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 CSADQ9Y600 493 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 PLIN4Q96Q06 1357 aa17.91■□□□□ 0.46
ATG4D-211ENST00000589753 UBE2Q2LH0YL09 131 aa17.9■□□□□ 0.46
ATG4D-211ENST00000589753 ASNSP08243 561 aa17.9■□□□□ 0.46
ATG4D-211ENST00000589753 JAG1P78504 1218 aa17.9■□□□□ 0.46
ATG4D-211ENST00000589753 SHROOM1Q2M3G4 852 aaPredicted RBP17.9■□□□□ 0.46
ATG4D-211ENST00000589753 NOL9Q5SY16 702 aaKnown RBP17.9■□□□□ 0.46
ATG4D-211ENST00000589753 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.9■□□□□ 0.46
ATG4D-211ENST00000589753 CYB5R4Q7L1T6 521 aa17.9■□□□□ 0.46
ATG4D-211ENST00000589753 DHX32Q7L7V1 743 aaKnown RBP17.9■□□□□ 0.46
ATG4D-211ENST00000589753 IQCA1Q86XH1 822 aa17.9■□□□□ 0.46
ATG4D-211ENST00000589753 KIF2CQ99661 725 aa17.9■□□□□ 0.46
ATG4D-211ENST00000589753 ZSWIM6Q9HCJ5 1215 aa17.9■□□□□ 0.46
ATG4D-211ENST00000589753 OTOFQ9HC10 1997 aa17.9■□□□□ 0.46
ATG4D-211ENST00000589753 ATAD5Q96QE3 1844 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 DOCK1Q14185 1865 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 UNCXA6NJT0 531 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 ANTXR2P58335 489 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 COL9A3Q14050 684 aaPredicted RBP17.89■□□□□ 0.45
ATG4D-211ENST00000589753 VGLL4Q14135 290 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 RAB3GAP1Q15042 981 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 LDLRAD1Q5T700 205 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 RUFY3Q7L099 469 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 CHST3Q7LGC8 479 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 UBAC1Q9BSL1 405 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.89■□□□□ 0.45
ATG4D-211ENST00000589753 PICK1Q9NRD5 415 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 TCP11L1Q9NUJ3 509 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 CYP46A1Q9Y6A2 500 aa17.89■□□□□ 0.45
ATG4D-211ENST00000589753 IGKV6D-41A0A0C4DH26 115 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 PRC1O43663 620 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 CPA1P15085 419 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 RPS6KB1P23443 525 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 GUCY1A2P33402 732 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 EXOSC10Q01780 885 aaKnown RBP17.88■□□□□ 0.45
ATG4D-211ENST00000589753 SEPT2Q15019 361 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 CCDC178Q5BJE1 867 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 ZSCAN10Q96SZ4 725 aaPredicted RBP17.88■□□□□ 0.45
ATG4D-211ENST00000589753 ZKSCAN3Q9BRR0 538 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 UPF3BQ9BZI7 483 aaKnown RBP17.88■□□□□ 0.45
ATG4D-211ENST00000589753 KANSL2Q9H9L4 492 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 IL17RBQ9NRM6 502 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 SNCAIPQ9Y6H5 919 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 WDR19Q8NEZ3 1342 aa17.88■□□□□ 0.45
ATG4D-211ENST00000589753 GREB1LQ9C091 1923 aaPredicted RBP17.88■□□□□ 0.45
ATG4D-211ENST00000589753 TMEM88BA6NKF7 163 aa17.87■□□□□ 0.45
ATG4D-211ENST00000589753 NMT2O60551 498 aa17.87■□□□□ 0.45
ATG4D-211ENST00000589753 PTPRAP18433 802 aa17.87■□□□□ 0.45
ATG4D-211ENST00000589753 SART3Q15020 963 aaKnown RBP17.87■□□□□ 0.45
ATG4D-211ENST00000589753 PPP4R3BQ5MIZ7 849 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms