RNA–Protein interactions for RNA: ENST00000589537.1

NFIC-208, Transcript of nuclear factor I C, humanhuman

TSL 2

Gene NFIC, Length 977 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-208ENST00000589537 NAV1Q8NEY1 1877 aa20.05■□□□□ 0.8
NFIC-208ENST00000589537 POLR3DP05423 398 aaPredicted RBP20.05■□□□□ 0.8
NFIC-208ENST00000589537 OSBPP22059 807 aa20.05■□□□□ 0.8
NFIC-208ENST00000589537 FCGRTP55899 365 aa20.05■□□□□ 0.8
NFIC-208ENST00000589537 SLC9C1Q4G0N8 1177 aa20.05■□□□□ 0.8
NFIC-208ENST00000589537 DDRGK1Q96HY6 314 aa20.05■□□□□ 0.8
NFIC-208ENST00000589537 ATP8A2Q9NTI2 1148 aa20.05■□□□□ 0.8
NFIC-208ENST00000589537 PCDHB15Q9Y5E8 787 aa20.05■□□□□ 0.8
NFIC-208ENST00000589537 PTCH2Q9Y6C5 1203 aa20.05■□□□□ 0.8
NFIC-208ENST00000589537 USP17L10C9JJH3 530 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 GDF11O95390 407 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 FMNL1O95466 1100 aaPredicted RBP20.04■□□□□ 0.8
NFIC-208ENST00000589537 GCLCP48506 637 aaPredicted RBP20.04■□□□□ 0.8
NFIC-208ENST00000589537 SLC4A8Q2Y0W8 1093 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 TREML2Q5T2D2 321 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 AMOTL1Q8IY63 956 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 LCORLQ8N3X6 602 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 ARHGAP39Q9C0H5 1083 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 DCP1AQ9NPI6 582 aaPredicted RBP20.04■□□□□ 0.8
NFIC-208ENST00000589537 MCM9Q9NXL9 1143 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 SRRDQ9UH36 339 aa20.04■□□□□ 0.8
NFIC-208ENST00000589537 TTC41PQ6P2S7 1318 aa20.03■□□□□ 0.8
NFIC-208ENST00000589537 ERC2O15083 957 aa20.03■□□□□ 0.8
NFIC-208ENST00000589537 MBD4O95243 580 aa20.03■□□□□ 0.8
NFIC-208ENST00000589537 MTMR2Q13614 643 aa20.03■□□□□ 0.8
NFIC-208ENST00000589537 FAM110CQ1W6H9 321 aa20.03■□□□□ 0.8
NFIC-208ENST00000589537 LRRFIP1Q32MZ4 808 aaKnown RBP20.03■□□□□ 0.8
NFIC-208ENST00000589537 CERKLQ49MI3 558 aaPredicted RBP20.03■□□□□ 0.8
NFIC-208ENST00000589537 TRIM47Q96LD4 638 aa20.03■□□□□ 0.8
NFIC-208ENST00000589537 CABP5Q9NP86 173 aa20.03■□□□□ 0.8
NFIC-208ENST00000589537 ZBTB47Q9UFB7 747 aaPredicted RBP20.03■□□□□ 0.8
NFIC-208ENST00000589537 GH2P01242 217 aa20.02■□□□□ 0.8
NFIC-208ENST00000589537 PLCD1P51178 756 aa20.02■□□□□ 0.8
NFIC-208ENST00000589537 GABPAQ06546 454 aa20.02■□□□□ 0.8
NFIC-208ENST00000589537 KBTBD3Q8NAB2 608 aa20.02■□□□□ 0.8
NFIC-208ENST00000589537 ZNF333Q96JL9 665 aa20.02■□□□□ 0.8
NFIC-208ENST00000589537 CRBNQ96SW2 442 aa20.02■□□□□ 0.8
NFIC-208ENST00000589537 ARMT1Q9H993 441 aa20.02■□□□□ 0.8
NFIC-208ENST00000589537 SWAP70Q9UH65 585 aa20.02■□□□□ 0.8
NFIC-208ENST00000589537 HTTP42858 3142 aa20.01■□□□□ 0.79
NFIC-208ENST00000589537 HOXA7P31268 230 aaPredicted RBP20.01■□□□□ 0.79
NFIC-208ENST00000589537 IRX3P78415 501 aaPredicted RBP20.01■□□□□ 0.79
NFIC-208ENST00000589537 ABCB5Q2M3G0 1257 aa20.01■□□□□ 0.79
NFIC-208ENST00000589537 SDR42E1Q8WUS8 393 aa20.01■□□□□ 0.79
NFIC-208ENST00000589537 TMEM106CQ9BVX2 250 aa20.01■□□□□ 0.79
NFIC-208ENST00000589537 ASCC2Q9H1I8 757 aaPredicted RBP20.01■□□□□ 0.79
NFIC-208ENST00000589537 MYH7P12883 1935 aa20.01■□□□□ 0.79
NFIC-208ENST00000589537 MYPNQ86TC9 1320 aa20.01■□□□□ 0.79
NFIC-208ENST00000589537 ZFYP08048 801 aaPredicted RBP20■□□□□ 0.79
NFIC-208ENST00000589537 SHMT1P34896 483 aa20■□□□□ 0.79
NFIC-208ENST00000589537 USP14P54578 494 aa20■□□□□ 0.79
NFIC-208ENST00000589537 JAG1P78504 1218 aa20■□□□□ 0.79
NFIC-208ENST00000589537 USP17L2Q6R6M4 530 aa20■□□□□ 0.79
NFIC-208ENST00000589537 RAET1EQ8TD07 263 aa20■□□□□ 0.79
NFIC-208ENST00000589537 GTF3C2Q8WUA4 911 aaPredicted RBP20■□□□□ 0.79
NFIC-208ENST00000589537 GCC1Q96CN9 775 aa20■□□□□ 0.79
NFIC-208ENST00000589537 RBBP6Q7Z6E9 1792 aaKnown RBP19.99■□□□□ 0.79
NFIC-208ENST00000589537 GLRX3O76003 335 aaKnown RBP19.99■□□□□ 0.79
NFIC-208ENST00000589537 CTGFP29279 349 aa19.99■□□□□ 0.79
NFIC-208ENST00000589537 HDAC1Q13547 482 aaPredicted RBP19.99■□□□□ 0.79
NFIC-208ENST00000589537 C12orf42Q96LP6 360 aa19.99■□□□□ 0.79
NFIC-208ENST00000589537 FEZ1Q99689 392 aa19.99■□□□□ 0.79
NFIC-208ENST00000589537 ZSWIM8A7E2V4 1837 aa19.98■□□□□ 0.79
NFIC-208ENST00000589537 RAB3GAP1Q15042 981 aa19.98■□□□□ 0.79
NFIC-208ENST00000589537 ANKRD13CQ8N6S4 541 aa19.98■□□□□ 0.79
NFIC-208ENST00000589537 KIAA1683Q9H0B3 1180 aa19.98■□□□□ 0.79
NFIC-208ENST00000589537 TNPO2O14787 897 aaKnown RBP19.97■□□□□ 0.79
NFIC-208ENST00000589537 SHROOM1Q2M3G4 852 aaPredicted RBP19.97■□□□□ 0.79
NFIC-208ENST00000589537 SLAIN1Q8ND83 568 aa19.97■□□□□ 0.79
NFIC-208ENST00000589537 APPBP2Q92624 585 aa19.97■□□□□ 0.79
NFIC-208ENST00000589537 COA7Q96BR5 231 aa19.97■□□□□ 0.79
NFIC-208ENST00000589537 MORF4L1Q9UBU8 362 aa19.97■□□□□ 0.79
NFIC-208ENST00000589537 SLC4A4Q9Y6R1 1079 aa19.97■□□□□ 0.79
NFIC-208ENST00000589537 RNF113AO15541 343 aaKnown RBP19.96■□□□□ 0.79
NFIC-208ENST00000589537 MX1P20591 662 aa19.96■□□□□ 0.79
NFIC-208ENST00000589537 GRK4P32298 578 aa19.96■□□□□ 0.79
NFIC-208ENST00000589537 PRKCZQ05513 592 aa19.96■□□□□ 0.79
NFIC-208ENST00000589537 GIMAP6Q6P9H5 292 aa19.96■□□□□ 0.79
NFIC-208ENST00000589537 PUS7LQ9H0K6 701 aaKnown RBP19.96■□□□□ 0.79
NFIC-208ENST00000589537 ARPP21Q9UBL0 812 aaPredicted RBP19.96■□□□□ 0.79
NFIC-208ENST00000589537 MGAMO43451 1857 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 PRKAB2O43741 272 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 ECM2O94769 699 aaPredicted RBP19.95■□□□□ 0.78
NFIC-208ENST00000589537 GNAT2P19087 354 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 IRF5Q13568 498 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 SLFNL1Q499Z3 407 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 C12orf60Q5U649 245 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 TSHZ3Q63HK5 1081 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 TMEM179Q6ZVK1 233 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 SH3TC2Q8TF17 1288 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 CCDC17Q96LX7 622 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 EMILIN3Q9NT22 766 aa19.95■□□□□ 0.78
NFIC-208ENST00000589537 USP17L12C9JPN9 530 aa19.94■□□□□ 0.78
NFIC-208ENST00000589537 USP17L21D6R901 530 aa19.94■□□□□ 0.78
NFIC-208ENST00000589537 MPHOSPH10O00566 681 aaKnown RBP19.94■□□□□ 0.78
NFIC-208ENST00000589537 HERVK_113P62684 666 aa19.94■□□□□ 0.78
NFIC-208ENST00000589537 UBXN2AP68543 259 aa19.94■□□□□ 0.78
NFIC-208ENST00000589537 ANKRD45Q5TZF3 282 aa19.94■□□□□ 0.78
NFIC-208ENST00000589537 PI4K2BQ8TCG2 481 aa19.94■□□□□ 0.78
NFIC-208ENST00000589537 PXYLP1Q8TE99 480 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms