RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 CLEC4GQ6UXB4 293 aa10.66□□□□□ -0.7
DNMT1-219ENST00000589349 WHAMMQ8TF30 809 aa10.66□□□□□ -0.7
DNMT1-219ENST00000589349 IFT43Q96FT9 208 aa10.66□□□□□ -0.7
DNMT1-219ENST00000589349 ENAMQ9NRM1 1142 aa10.66□□□□□ -0.7
DNMT1-219ENST00000589349 KCNH4Q9UQ05 1017 aa10.66□□□□□ -0.7
DNMT1-219ENST00000589349 UBR2Q8IWV8 1755 aa10.66□□□□□ -0.7
DNMT1-219ENST00000589349 APAF1O14727 1248 aa10.65□□□□□ -0.7
DNMT1-219ENST00000589349 ANXA1P04083 346 aa10.65□□□□□ -0.7
DNMT1-219ENST00000589349 SFSWAPQ12872 951 aaKnown RBP10.65□□□□□ -0.7
DNMT1-219ENST00000589349 NAA30Q147X3 362 aaPredicted RBP10.65□□□□□ -0.7
DNMT1-219ENST00000589349 TTLL7Q6ZT98 887 aa10.65□□□□□ -0.7
DNMT1-219ENST00000589349 RETREG2Q8NC44 543 aa10.65□□□□□ -0.7
DNMT1-219ENST00000589349 DMGDHQ9UI17 866 aaKnown RBP10.65□□□□□ -0.7
DNMT1-219ENST00000589349 HCN2Q9UL51 889 aa10.65□□□□□ -0.7
DNMT1-219ENST00000589349 MTMR7Q9Y216 660 aa10.65□□□□□ -0.7
DNMT1-219ENST00000589349 SIPA1L3O60292 1781 aaPredicted RBP10.65□□□□□ -0.71
DNMT1-219ENST00000589349 GOLGB1Q14789 3259 aaKnown RBP10.64□□□□□ -0.71
DNMT1-219ENST00000589349 BRD2P25440 801 aaKnown RBP10.64□□□□□ -0.71
DNMT1-219ENST00000589349 ADH6P28332 368 aa10.64□□□□□ -0.71
DNMT1-219ENST00000589349 IDH3AP50213 366 aa10.64□□□□□ -0.71
DNMT1-219ENST00000589349 ARSDP51689 593 aa10.64□□□□□ -0.71
DNMT1-219ENST00000589349 ZNF468Q5VIY5 522 aaPredicted RBP10.64□□□□□ -0.71
DNMT1-219ENST00000589349 ZNF428Q96B54 188 aa10.64□□□□□ -0.71
DNMT1-219ENST00000589349 MASTLQ96GX5 879 aa10.64□□□□□ -0.71
DNMT1-219ENST00000589349 NYXQ9GZU5 481 aa10.64□□□□□ -0.71
DNMT1-219ENST00000589349 SAP130Q9H0E3 1048 aa10.64□□□□□ -0.71
DNMT1-219ENST00000589349 MAP3K15Q6ZN16 1313 aa10.63□□□□□ -0.71
DNMT1-219ENST00000589349 KDM2BQ8NHM5 1336 aa10.63□□□□□ -0.71
DNMT1-219ENST00000589349 ELL2O00472 640 aaPredicted RBP10.63□□□□□ -0.71
DNMT1-219ENST00000589349 TCERG1O14776 1098 aaKnown RBP10.63□□□□□ -0.71
DNMT1-219ENST00000589349 MICAL2O94851 1124 aa10.63□□□□□ -0.71
DNMT1-219ENST00000589349 CALD1Q05682 793 aaKnown RBP10.63□□□□□ -0.71
DNMT1-219ENST00000589349 SLCO4C1Q6ZQN7 724 aa10.63□□□□□ -0.71
DNMT1-219ENST00000589349 CAPN12Q6ZSI9 719 aa10.63□□□□□ -0.71
DNMT1-219ENST00000589349 RPGRQ92834 1020 aaKnown RBP10.63□□□□□ -0.71
DNMT1-219ENST00000589349 MRS2Q9HD23 443 aa10.63□□□□□ -0.71
DNMT1-219ENST00000589349 CARNS1A5YM72 827 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 OIP5O43482 229 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 LMNB1P20700 586 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 INPP5BP32019 993 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 SPEM2Q0P670 501 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 KRT24Q2M2I5 525 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 STYK1Q6J9G0 422 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 PRPF40BQ6NWY9 871 aaKnown RBP10.62□□□□□ -0.71
DNMT1-219ENST00000589349 PPP1R42Q7Z4L9 355 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 TMX4Q9H1E5 349 aaPredicted RBP10.62□□□□□ -0.71
DNMT1-219ENST00000589349 RRAGCQ9HB90 399 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 NMRK2Q9NPI5 230 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 BABAM1Q9NWV8 329 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 GGA1Q9UJY5 639 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 DLG5Q8TDM6 1919 aa10.62□□□□□ -0.71
DNMT1-219ENST00000589349 ERVV-1B6SEH8 477 aa10.61□□□□□ -0.71
DNMT1-219ENST00000589349 NPR1P16066 1061 aa10.61□□□□□ -0.71
DNMT1-219ENST00000589349 COPS6Q7L5N1 327 aa10.61□□□□□ -0.71
DNMT1-219ENST00000589349 TREML1Q86YW5 311 aa10.61□□□□□ -0.71
DNMT1-219ENST00000589349 XAGE3Q8WTP9 111 aa10.61□□□□□ -0.71
DNMT1-219ENST00000589349 EFCC1Q9HA90 598 aa10.61□□□□□ -0.71
DNMT1-219ENST00000589349 KIF13BQ9NQT8 1826 aa10.61□□□□□ -0.71
DNMT1-219ENST00000589349 NEURL1BA8MQ27 555 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 CHL1O00533 1208 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 ARHGEF15O94989 841 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 SRGNP10124 158 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 PROSER3Q2NL68 480 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 SOGA3Q5TF21 947 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 SUSD4Q5VX71 490 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 DUSP27Q5VZP5 1158 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 TAOK3Q9H2K8 898 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 C11orf16Q9NQ32 467 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 STIM2Q9P246 746 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 CHPF2Q9P2E5 772 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 SEPT3Q9UH03 358 aa10.6□□□□□ -0.71
DNMT1-219ENST00000589349 AFDNP55196 1824 aaKnown RBP10.6□□□□□ -0.71
DNMT1-219ENST00000589349 TNFRSF10BO14763 440 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 ALDH1B1P30837 517 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 GNAI1P63096 354 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 CCDC184Q52MB2 194 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 SYT9Q86SS6 491 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 FAM9BQ8IZU0 186 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 GALNT6Q8NCL4 622 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 RBM17Q96I25 401 aaKnown RBP10.59□□□□□ -0.71
DNMT1-219ENST00000589349 SLC30A3Q99726 388 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 UTP14AQ9BVJ6 771 aaKnown RBP10.59□□□□□ -0.71
DNMT1-219ENST00000589349 FAM13BQ9NYF5 915 aa10.59□□□□□ -0.71
DNMT1-219ENST00000589349 DNMT3AQ9Y6K1 912 aaPredicted RBP10.59□□□□□ -0.71
DNMT1-219ENST00000589349 SCN7AQ01118 1682 aa10.58□□□□□ -0.72
DNMT1-219ENST00000589349 ADCY9O60503 1353 aa10.58□□□□□ -0.72
DNMT1-219ENST00000589349 PCBP4P57723 403 aaKnown RBP10.58□□□□□ -0.72
DNMT1-219ENST00000589349 PARP10Q53GL7 1025 aa10.58□□□□□ -0.72
DNMT1-219ENST00000589349 CCDC93Q567U6 631 aa10.58□□□□□ -0.72
DNMT1-219ENST00000589349 HSP90AB3PQ58FF7 597 aa10.58□□□□□ -0.72
DNMT1-219ENST00000589349 NEDD1Q8NHV4 660 aa10.58□□□□□ -0.72
DNMT1-219ENST00000589349 HELQQ8TDG4 1101 aa10.58□□□□□ -0.72
DNMT1-219ENST00000589349 EDARADDQ8WWZ3 215 aa10.58□□□□□ -0.72
DNMT1-219ENST00000589349 DDX21Q9NR30 783 aaKnown RBP eCLIP10.58□□□□□ -0.72
DNMT1-219ENST00000589349 NFKBIEO00221 500 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 SIN3BO75182 1162 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 TOMM70O94826 608 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 EPXP11678 715 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 GRIN2CQ14957 1233 aa10.57□□□□□ -0.72
DNMT1-219ENST00000589349 PHLDB3Q6NSJ2 640 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms