RNA–Protein interactions for RNA: ENST00000589118.5

SF3A2-204, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 759 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-204ENST00000589118 ALDH1L2Q3SY69 923 aa18.64■□□□□ 0.57
SF3A2-204ENST00000589118 USP6NLQ92738 828 aa18.64■□□□□ 0.57
SF3A2-204ENST00000589118 GUCD1Q96NT3 240 aa18.64■□□□□ 0.57
SF3A2-204ENST00000589118 AS3MTQ9HBK9 375 aa18.64■□□□□ 0.57
SF3A2-204ENST00000589118 AATFQ9NY61 560 aaKnown RBP eCLIP18.64■□□□□ 0.57
SF3A2-204ENST00000589118 TMOD4Q9NZQ9 345 aa18.64■□□□□ 0.57
SF3A2-204ENST00000589118 ZBTB22O15209 634 aa18.63■□□□□ 0.57
SF3A2-204ENST00000589118 ZKSCAN1P17029 563 aaPredicted RBP18.63■□□□□ 0.57
SF3A2-204ENST00000589118 GORABQ5T7V8 394 aa18.63■□□□□ 0.57
SF3A2-204ENST00000589118 ADGRA1Q86SQ6 560 aa18.63■□□□□ 0.57
SF3A2-204ENST00000589118 TGFBRAP1Q8WUH2 860 aa18.63■□□□□ 0.57
SF3A2-204ENST00000589118 WDR18Q9BV38 432 aa18.63■□□□□ 0.57
SF3A2-204ENST00000589118 FLRT1Q9NZU1 646 aa18.63■□□□□ 0.57
SF3A2-204ENST00000589118 SAP30BPQ9UHR5 308 aaKnown RBP18.63■□□□□ 0.57
SF3A2-204ENST00000589118 PALD1Q9ULE6 856 aa18.63■□□□□ 0.57
SF3A2-204ENST00000589118 UNC80Q8N2C7 3258 aa18.63■□□□□ 0.57
SF3A2-204ENST00000589118 HOXA7P31268 230 aaPredicted RBP18.62■□□□□ 0.57
SF3A2-204ENST00000589118 GSTO1P78417 241 aa18.62■□□□□ 0.57
SF3A2-204ENST00000589118 ZYXQ15942 572 aaKnown RBP18.62■□□□□ 0.57
SF3A2-204ENST00000589118 GPR142Q7Z601 462 aa18.62■□□□□ 0.57
SF3A2-204ENST00000589118 EMILIN3Q9NT22 766 aa18.62■□□□□ 0.57
SF3A2-204ENST00000589118 LRP2BPQ9P2M1 347 aa18.62■□□□□ 0.57
SF3A2-204ENST00000589118 PI4KBQ9UBF8 816 aa18.62■□□□□ 0.57
SF3A2-204ENST00000589118 TNNQ9UQP3 1299 aa18.62■□□□□ 0.57
SF3A2-204ENST00000589118 AKAP2Q9Y2D5 859 aa18.62■□□□□ 0.57
SF3A2-204ENST00000589118 COL2A1P02458 1487 aaPredicted RBP18.62■□□□□ 0.57
SF3A2-204ENST00000589118 XRCC5P13010 732 aaKnown RBP18.61■□□□□ 0.57
SF3A2-204ENST00000589118 ATN1P54259 1190 aaPredicted RBP18.61■□□□□ 0.57
SF3A2-204ENST00000589118 ERVK-9P63128 1117 aa18.61■□□□□ 0.57
SF3A2-204ENST00000589118 ERVK-24P63145 666 aa18.61■□□□□ 0.57
SF3A2-204ENST00000589118 MORN1Q5T089 497 aa18.61■□□□□ 0.57
SF3A2-204ENST00000589118 SENP6Q9GZR1 1112 aaPredicted RBP18.61■□□□□ 0.57
SF3A2-204ENST00000589118 HERC5Q9UII4 1024 aaKnown RBP18.61■□□□□ 0.57
SF3A2-204ENST00000589118 FOCADQ5VW36 1801 aa18.6■□□□□ 0.57
SF3A2-204ENST00000589118 CNMDO75829 334 aa18.6■□□□□ 0.57
SF3A2-204ENST00000589118 DYNLL1P63167 89 aaKnown RBP18.6■□□□□ 0.57
SF3A2-204ENST00000589118 PDE3AQ14432 1141 aa18.6■□□□□ 0.57
SF3A2-204ENST00000589118 PLEKHH3Q7Z736 793 aa18.6■□□□□ 0.57
SF3A2-204ENST00000589118 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.6■□□□□ 0.57
SF3A2-204ENST00000589118 TBC1D2Q9BYX2 928 aa18.6■□□□□ 0.57
SF3A2-204ENST00000589118 USP17L10C9JJH3 530 aa18.59■□□□□ 0.57
SF3A2-204ENST00000589118 POTEB2H3BUK9 544 aa18.59■□□□□ 0.57
SF3A2-204ENST00000589118 ARID4AP29374 1257 aaPredicted RBP18.59■□□□□ 0.57
SF3A2-204ENST00000589118 CCAR1Q8IX12 1150 aaKnown RBP18.59■□□□□ 0.57
SF3A2-204ENST00000589118 CRACR2BQ8N4Y2 399 aaPredicted RBP18.59■□□□□ 0.57
SF3A2-204ENST00000589118 SOCS4Q8WXH5 440 aa18.59■□□□□ 0.57
SF3A2-204ENST00000589118 ZBTB21Q9ULJ3 1066 aa18.59■□□□□ 0.57
SF3A2-204ENST00000589118 MAST2Q6P0Q8 1798 aa18.58■□□□□ 0.57
SF3A2-204ENST00000589118 FLT1P17948 1338 aa18.58■□□□□ 0.57
SF3A2-204ENST00000589118 PNMA6EA0A0J9YXQ4 647 aa18.58■□□□□ 0.56
SF3A2-204ENST00000589118 C19orf81C9J6K1 198 aa18.58■□□□□ 0.56
SF3A2-204ENST00000589118 ASNSP08243 561 aa18.58■□□□□ 0.56
SF3A2-204ENST00000589118 MAPK4P31152 587 aa18.58■□□□□ 0.56
SF3A2-204ENST00000589118 RGS2P41220 211 aa18.58■□□□□ 0.56
SF3A2-204ENST00000589118 WDR78Q5VTH9 848 aa18.58■□□□□ 0.56
SF3A2-204ENST00000589118 NAA16Q6N069 864 aaPredicted RBP18.58■□□□□ 0.56
SF3A2-204ENST00000589118 API5Q9BZZ5 524 aaKnown RBP18.58■□□□□ 0.56
SF3A2-204ENST00000589118 MYH1P12882 1939 aa18.57■□□□□ 0.56
SF3A2-204ENST00000589118 CNGA1P29973 690 aa18.57■□□□□ 0.56
SF3A2-204ENST00000589118 MAP2K5Q13163 448 aa18.57■□□□□ 0.56
SF3A2-204ENST00000589118 EDC3Q96F86 508 aaKnown RBP18.57■□□□□ 0.56
SF3A2-204ENST00000589118 MAP4K4O95819 1239 aaPredicted RBP18.56■□□□□ 0.56
SF3A2-204ENST00000589118 GH2P01242 217 aa18.56■□□□□ 0.56
SF3A2-204ENST00000589118 CYP2C19P33261 490 aa18.56■□□□□ 0.56
SF3A2-204ENST00000589118 ANO1Q5XXA6 986 aa18.56■□□□□ 0.56
SF3A2-204ENST00000589118 FOXP4Q8IVH2 680 aaPredicted RBP18.56■□□□□ 0.56
SF3A2-204ENST00000589118 TRMT2AQ8IZ69 625 aaKnown RBP18.56■□□□□ 0.56
SF3A2-204ENST00000589118 TRPV1Q8NER1 839 aa18.56■□□□□ 0.56
SF3A2-204ENST00000589118 NPLOC4Q8TAT6 608 aa18.56■□□□□ 0.56
SF3A2-204ENST00000589118 APBA2Q99767 749 aa18.56■□□□□ 0.56
SF3A2-204ENST00000589118 NOL10Q9BSC4 688 aaKnown RBP18.56■□□□□ 0.56
SF3A2-204ENST00000589118 TRIM34Q9BYJ4 488 aa18.56■□□□□ 0.56
SF3A2-204ENST00000589118 DHX36Q9H2U1 1008 aaKnown RBP18.56■□□□□ 0.56
SF3A2-204ENST00000589118 CWC22Q9HCG8 908 aaKnown RBP18.56■□□□□ 0.56
SF3A2-204ENST00000589118 LTBP2Q14767 1821 aa18.56■□□□□ 0.56
SF3A2-204ENST00000589118 CYP2E1P05181 493 aaPredicted RBP18.55■□□□□ 0.56
SF3A2-204ENST00000589118 METTL16Q86W50 562 aaKnown RBP18.55■□□□□ 0.56
SF3A2-204ENST00000589118 DBNDD2Q9BQY9 259 aa18.55■□□□□ 0.56
SF3A2-204ENST00000589118 PIH1D3Q9NQM4 214 aaKnown RBP18.55■□□□□ 0.56
SF3A2-204ENST00000589118 BTBD7Q9P203 1132 aa18.55■□□□□ 0.56
SF3A2-204ENST00000589118 BAG3O95817 575 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 PPP4CP60510 307 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 G3BP1Q13283 466 aaKnown RBP eCLIP18.54■□□□□ 0.56
SF3A2-204ENST00000589118 MTX1Q13505 466 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 SHHQ15465 462 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 C9orf50Q5SZB4 431 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 GJC2Q5T442 439 aaPredicted RBP18.54■□□□□ 0.56
SF3A2-204ENST00000589118 USP17L2Q6R6M4 530 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 TRMT44Q8IYL2 757 aaKnown RBP18.54■□□□□ 0.56
SF3A2-204ENST00000589118 ACER1Q8TDN7 264 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 LBHD1Q9BQE6 289 aaPredicted RBP18.54■□□□□ 0.56
SF3A2-204ENST00000589118 HDAC5Q9UQL6 1122 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 DNAH12Q6ZR08 3092 aa18.54■□□□□ 0.56
SF3A2-204ENST00000589118 UQCRFS1P1P0C7P4 283 aa18.53■□□□□ 0.56
SF3A2-204ENST00000589118 ZAP70P43403 619 aa18.53■□□□□ 0.56
SF3A2-204ENST00000589118 RTP1P59025 263 aa18.53■□□□□ 0.56
SF3A2-204ENST00000589118 TTC39AQ5SRH9 613 aa18.53■□□□□ 0.56
SF3A2-204ENST00000589118 DDX20Q9UHI6 824 aaKnown RBP18.53■□□□□ 0.56
SF3A2-204ENST00000589118 ATP11BQ9Y2G3 1177 aa18.53■□□□□ 0.56
SF3A2-204ENST00000589118 RLFQ13129 1914 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms