RNA–Protein interactions for RNA: ENST00000589091.1

DNMT1-217, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-217ENST00000589091 NDUFB9Q9Y6M9 179 aa17.78■□□□□ 0.44
DNMT1-217ENST00000589091 C19orf81C9J6K1 198 aa17.77■□□□□ 0.44
DNMT1-217ENST00000589091 UBXN2AP68543 259 aa17.77■□□□□ 0.44
DNMT1-217ENST00000589091 TTC6Q86TZ1 520 aa17.77■□□□□ 0.44
DNMT1-217ENST00000589091 SIRT2Q8IXJ6 389 aa17.77■□□□□ 0.44
DNMT1-217ENST00000589091 SLAIN1Q8ND83 568 aa17.77■□□□□ 0.44
DNMT1-217ENST00000589091 EHD4Q9H223 541 aa17.77■□□□□ 0.44
DNMT1-217ENST00000589091 TMOD4Q9NZQ9 345 aa17.77■□□□□ 0.44
DNMT1-217ENST00000589091 SAP30BPQ9UHR5 308 aaKnown RBP17.77■□□□□ 0.44
DNMT1-217ENST00000589091 APBB1O00213 710 aa17.76■□□□□ 0.43
DNMT1-217ENST00000589091 TNPO2O14787 897 aaKnown RBP17.76■□□□□ 0.43
DNMT1-217ENST00000589091 BACE1P56817 501 aa17.76■□□□□ 0.43
DNMT1-217ENST00000589091 PRKCZQ05513 592 aa17.76■□□□□ 0.43
DNMT1-217ENST00000589091 ANKRD13CQ8N6S4 541 aa17.76■□□□□ 0.43
DNMT1-217ENST00000589091 NKX2-3Q8TAU0 364 aa17.76■□□□□ 0.43
DNMT1-217ENST00000589091 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
DNMT1-217ENST00000589091 MAGEB6P1A0A0J9YX57 407 aa17.75■□□□□ 0.43
DNMT1-217ENST00000589091 USP17L10C9JJH3 530 aa17.75■□□□□ 0.43
DNMT1-217ENST00000589091 GDF11O95390 407 aa17.75■□□□□ 0.43
DNMT1-217ENST00000589091 MTMR2Q13614 643 aa17.75■□□□□ 0.43
DNMT1-217ENST00000589091 COA7Q96BR5 231 aa17.75■□□□□ 0.43
DNMT1-217ENST00000589091 SERPINB13Q9UIV8 391 aa17.75■□□□□ 0.43
DNMT1-217ENST00000589091 MYCP01106 439 aaPredicted RBP17.74■□□□□ 0.43
DNMT1-217ENST00000589091 IRX3P78415 501 aaPredicted RBP17.74■□□□□ 0.43
DNMT1-217ENST00000589091 IRF5Q13568 498 aa17.74■□□□□ 0.43
DNMT1-217ENST00000589091 SLC9C2Q5TAH2 1124 aa17.74■□□□□ 0.43
DNMT1-217ENST00000589091 TATDN1Q6P1N9 297 aa17.74■□□□□ 0.43
DNMT1-217ENST00000589091 PXYLP1Q8TE99 480 aa17.74■□□□□ 0.43
DNMT1-217ENST00000589091 DNAJC2Q99543 621 aaKnown RBP17.74■□□□□ 0.43
DNMT1-217ENST00000589091 RIOK1Q9BRS2 568 aaKnown RBP17.74■□□□□ 0.43
DNMT1-217ENST00000589091 CRNKL1Q9BZJ0 848 aaKnown RBP17.74■□□□□ 0.43
DNMT1-217ENST00000589091 ASCC2Q9H1I8 757 aaPredicted RBP17.74■□□□□ 0.43
DNMT1-217ENST00000589091 BIN2Q9UBW5 565 aaPredicted RBP17.74■□□□□ 0.43
DNMT1-217ENST00000589091 GABRQQ9UN88 632 aa17.74■□□□□ 0.43
DNMT1-217ENST00000589091 GOLIM4O00461 696 aa17.73■□□□□ 0.43
DNMT1-217ENST00000589091 SLC34A2O95436 690 aa17.73■□□□□ 0.43
DNMT1-217ENST00000589091 PDE6AP16499 860 aa17.73■□□□□ 0.43
DNMT1-217ENST00000589091 HOXA7P31268 230 aaPredicted RBP17.73■□□□□ 0.43
DNMT1-217ENST00000589091 FLT3LGP49771 235 aa17.73■□□□□ 0.43
DNMT1-217ENST00000589091 MTFR1Q15390 333 aa17.73■□□□□ 0.43
DNMT1-217ENST00000589091 GCC1Q96CN9 775 aa17.73■□□□□ 0.43
DNMT1-217ENST00000589091 PARP14Q460N5 1801 aa17.72■□□□□ 0.43
DNMT1-217ENST00000589091 ADCY3O60266 1144 aa17.72■□□□□ 0.43
DNMT1-217ENST00000589091 CAPN2P17655 700 aa17.72■□□□□ 0.43
DNMT1-217ENST00000589091 GTF3C2Q8WUA4 911 aaPredicted RBP17.72■□□□□ 0.43
DNMT1-217ENST00000589091 PAG1Q9NWQ8 432 aa17.72■□□□□ 0.43
DNMT1-217ENST00000589091 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
DNMT1-217ENST00000589091 ZNF532Q9HCE3 1301 aa17.72■□□□□ 0.43
DNMT1-217ENST00000589091 GH2P01242 217 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 POLR3DP05423 398 aaPredicted RBP17.71■□□□□ 0.43
DNMT1-217ENST00000589091 GJB1P08034 283 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 CCL5P13501 91 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 ATP5JP18859 108 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 JAG1P78504 1218 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 USP17L2Q6R6M4 530 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 LRRCC1Q9C099 1032 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.71■□□□□ 0.437e-9■■■□□ 17.6
DNMT1-217ENST00000589091 CABP5Q9NP86 173 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 MORF4L1Q9UBU8 362 aa17.71■□□□□ 0.43
DNMT1-217ENST00000589091 BRCA2P51587 3418 aa17.7■□□□□ 0.42
DNMT1-217ENST00000589091 GJA8P48165 433 aa17.7■□□□□ 0.42
DNMT1-217ENST00000589091 CERKLQ49MI3 558 aaPredicted RBP17.7■□□□□ 0.42
DNMT1-217ENST00000589091 RNF208Q9H0X6 261 aa17.7■□□□□ 0.42
DNMT1-217ENST00000589091 BOLA2Q9H3K6 86 aa17.7■□□□□ 0.42
DNMT1-217ENST00000589091 ZNFX1Q9P2E3 1918 aaKnown RBP17.69■□□□□ 0.42
DNMT1-217ENST00000589091 TCRBV5S4A2TA0A5A2 114 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 USP14P54578 494 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 HERVK_113P62684 666 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 ABCB5Q2M3G0 1257 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 SHROOM1Q2M3G4 852 aaPredicted RBP17.69■□□□□ 0.42
DNMT1-217ENST00000589091 C20orf194Q5TEA3 1177 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 C12orf42Q96LP6 360 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 FEZ1Q99689 392 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 HAUS7Q99871 368 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 BCL11AQ9H165 835 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 MCM9Q9NXL9 1143 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 FRMPD3Q5JV73 1810 aa17.69■□□□□ 0.42
DNMT1-217ENST00000589091 RLFQ13129 1914 aa17.68■□□□□ 0.42
DNMT1-217ENST00000589091 ALPK3Q96L96 1907 aa17.68■□□□□ 0.42
DNMT1-217ENST00000589091 ADD2P35612 726 aa17.68■□□□□ 0.42
DNMT1-217ENST00000589091 ZSCAN25Q6NSZ9 544 aa17.68■□□□□ 0.42
DNMT1-217ENST00000589091 SHISA4Q96DD7 197 aa17.68■□□□□ 0.42
DNMT1-217ENST00000589091 EMILIN3Q9NT22 766 aa17.68■□□□□ 0.42
DNMT1-217ENST00000589091 MYH4Q9Y623 1939 aa17.68■□□□□ 0.42
DNMT1-217ENST00000589091 COL11A1P12107 1806 aaPredicted RBP17.68■□□□□ 0.42
DNMT1-217ENST00000589091 INHAP05111 366 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 ELNP15502 786 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 SHMT1P34896 483 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 PLCD1P51178 756 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 GABPAQ06546 454 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 RAB3GAP1Q15042 981 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 LCORLQ8N3X6 602 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 GPRC5AQ8NFJ5 357 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 EDC3Q96F86 508 aaKnown RBP17.67■□□□□ 0.42
DNMT1-217ENST00000589091 P2RX7Q99572 595 aaKnown RBP17.67■□□□□ 0.42
DNMT1-217ENST00000589091 KIAA1683Q9H0B3 1180 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 DCP1AQ9NPI6 582 aaPredicted RBP17.67■□□□□ 0.42
DNMT1-217ENST00000589091 ATP8A2Q9NTI2 1148 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 SWAP70Q9UH65 585 aa17.67■□□□□ 0.42
DNMT1-217ENST00000589091 A0A0G2JMZ2 1700 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms