RNA–Protein interactions for RNA: ENST00000588952.5

DNMT1-216, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-216ENST00000588952 CERKLQ49MI3 558 aaPredicted RBP23.71■■□□□ 1.39
DNMT1-216ENST00000588952 FAM47AQ5JRC9 791 aa23.71■■□□□ 1.39
DNMT1-216ENST00000588952 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.71■■□□□ 1.39
DNMT1-216ENST00000588952 ZKSCAN4Q969J2 545 aaPredicted RBP23.71■■□□□ 1.39
DNMT1-216ENST00000588952 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.71■■□□□ 1.39
DNMT1-216ENST00000588952 C22orf23Q9BZE7 217 aa23.71■■□□□ 1.39
DNMT1-216ENST00000588952 TOMM22Q9NS69 142 aa23.71■■□□□ 1.39
DNMT1-216ENST00000588952 GREB1LQ9C091 1923 aaPredicted RBP23.71■■□□□ 1.39
DNMT1-216ENST00000588952 ATAD5Q96QE3 1844 aa23.7■■□□□ 1.39
DNMT1-216ENST00000588952 PCP11498 1178 aaKnown RBP23.7■■□□□ 1.38
DNMT1-216ENST00000588952 ZKSCAN1P17029 563 aaPredicted RBP23.7■■□□□ 1.38
DNMT1-216ENST00000588952 CAP2P40123 477 aa23.7■■□□□ 1.38
DNMT1-216ENST00000588952 DOCK1Q14185 1865 aa23.7■■□□□ 1.38
DNMT1-216ENST00000588952 RANBP6O60518 1105 aaKnown RBP23.69■■□□□ 1.38
DNMT1-216ENST00000588952 GUCY1A2P33402 732 aa23.69■■□□□ 1.38
DNMT1-216ENST00000588952 IREB2P48200 963 aaKnown RBP23.69■■□□□ 1.38
DNMT1-216ENST00000588952 MAP3K9P80192 1104 aa23.69■■□□□ 1.38
DNMT1-216ENST00000588952 VGLL4Q14135 290 aa23.69■■□□□ 1.38
DNMT1-216ENST00000588952 LDLRAD1Q5T700 205 aa23.69■■□□□ 1.38
DNMT1-216ENST00000588952 CYB5R4Q7L1T6 521 aa23.69■■□□□ 1.38
DNMT1-216ENST00000588952 ARMC9Q7Z3E5 817 aa23.69■■□□□ 1.38
DNMT1-216ENST00000588952 MB21D2Q8IYB1 491 aaPredicted RBP23.69■■□□□ 1.38
DNMT1-216ENST00000588952 CLMNQ96JQ2 1002 aa23.69■■□□□ 1.38
DNMT1-216ENST00000588952 ZNF287Q9HBT7 754 aa23.69■■□□□ 1.38
DNMT1-216ENST00000588952 CTNND1O60716 968 aaKnown RBP23.68■■□□□ 1.38
DNMT1-216ENST00000588952 KDM4AO75164 1064 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 GH2P01242 217 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 RBM25P49756 843 aaKnown RBP23.68■■□□□ 1.38
DNMT1-216ENST00000588952 FKBP1BP68106 108 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 TFAP4Q01664 338 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 ABCB5Q2M3G0 1257 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 CCDC84Q86UT8 332 aaPredicted RBP23.68■■□□□ 1.38
DNMT1-216ENST00000588952 CLEC10AQ8IUN9 316 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 ZNF444Q8N0Y2 327 aaPredicted RBP23.68■■□□□ 1.38
DNMT1-216ENST00000588952 C2orf69Q8N8R5 385 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 IL17RAQ96F46 866 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 JAKMIP1Q96N16 626 aaKnown RBP23.68■■□□□ 1.38
DNMT1-216ENST00000588952 TBC1D32Q96NH3 1257 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 ZBTB21Q9ULJ3 1066 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 SNCAIPQ9Y6H5 919 aa23.68■■□□□ 1.38
DNMT1-216ENST00000588952 PLIN4Q96Q06 1357 aa23.67■■□□□ 1.38
DNMT1-216ENST00000588952 MPHOSPH10O00566 681 aaKnown RBP23.67■■□□□ 1.38
DNMT1-216ENST00000588952 CPA1P15085 419 aa23.67■■□□□ 1.38
DNMT1-216ENST00000588952 ANTXR2P58335 489 aa23.67■■□□□ 1.38
DNMT1-216ENST00000588952 NOL9Q5SY16 702 aaKnown RBP23.67■■□□□ 1.38
DNMT1-216ENST00000588952 NCOA7Q8NI08 942 aa23.67■■□□□ 1.38
DNMT1-216ENST00000588952 CCDC17Q96LX7 622 aa23.67■■□□□ 1.38
DNMT1-216ENST00000588952 KIF2CQ99661 725 aa23.67■■□□□ 1.38
DNMT1-216ENST00000588952 KRT23Q9C075 422 aa23.67■■□□□ 1.38
DNMT1-216ENST00000588952 CNNM2Q9H8M5 875 aa23.67■■□□□ 1.38
DNMT1-216ENST00000588952 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
DNMT1-216ENST00000588952 IGKV6D-41A0A0C4DH26 115 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 NMT2O60551 498 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 ANAPC15P60006 121 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 KRT32Q14532 448 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 SEPT2Q15019 361 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 SCYL3Q8IZE3 742 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 NEDD1Q8NHV4 660 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 ESR2Q92731 530 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 NEK1Q96PY6 1258 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 ZSWIM5Q9P217 1185 aa23.66■■□□□ 1.38
DNMT1-216ENST00000588952 TSPY2A6NKD2 308 aa23.65■■□□□ 1.38
DNMT1-216ENST00000588952 TSPY3P0CV98 308 aa23.65■■□□□ 1.38
DNMT1-216ENST00000588952 TSPY8P0CW00 308 aa23.65■■□□□ 1.38
DNMT1-216ENST00000588952 TRDNQ13061 729 aa23.65■■□□□ 1.38
DNMT1-216ENST00000588952 CHST3Q7LGC8 479 aa23.65■■□□□ 1.38
DNMT1-216ENST00000588952 RALYLQ86SE5 291 aaKnown RBP23.65■■□□□ 1.38
DNMT1-216ENST00000588952 ANKRD13AQ8IZ07 590 aa23.65■■□□□ 1.38
DNMT1-216ENST00000588952 CNKSR2Q8WXI2 1034 aa23.65■■□□□ 1.38
DNMT1-216ENST00000588952 IL17RBQ9NRM6 502 aa23.65■■□□□ 1.38
DNMT1-216ENST00000588952 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.65■■□□□ 1.38
DNMT1-216ENST00000588952 TMEM179Q6ZVK1 233 aa23.64■■□□□ 1.37
DNMT1-216ENST00000588952 ZKSCAN3Q9BRR0 538 aa23.64■■□□□ 1.37
DNMT1-216ENST00000588952 ELP3Q9H9T3 547 aa23.64■■□□□ 1.37
DNMT1-216ENST00000588952 PHIPQ8WWQ0 1821 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 TMEM88BA6NKF7 163 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 RAB3GAP1Q15042 981 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 SAPCD2Q86UD0 394 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 CEP95Q96GE4 821 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 TCEANC2Q96MN5 208 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 CABP5Q9NP86 173 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 CSADQ9Y600 493 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 TLL2Q9Y6L7 1015 aa23.63■■□□□ 1.37
DNMT1-216ENST00000588952 ASNSP08243 561 aa23.62■■□□□ 1.37
DNMT1-216ENST00000588952 PTPRAP18433 802 aa23.62■■□□□ 1.37
DNMT1-216ENST00000588952 CASTP20810 708 aaKnown RBP23.62■■□□□ 1.37
DNMT1-216ENST00000588952 HUNKP57058 714 aa23.62■■□□□ 1.37
DNMT1-216ENST00000588952 EXOSC10Q01780 885 aaKnown RBP23.62■■□□□ 1.37
DNMT1-216ENST00000588952 SIAH1Q8IUQ4 282 aa23.62■■□□□ 1.37
DNMT1-216ENST00000588952 UPF3BQ9BZI7 483 aaKnown RBP23.62■■□□□ 1.37
DNMT1-216ENST00000588952 ZSWIM6Q9HCJ5 1215 aa23.62■■□□□ 1.37
DNMT1-216ENST00000588952 GPHNQ9NQX3 736 aaPredicted RBP23.62■■□□□ 1.37
DNMT1-216ENST00000588952 PRC1O43663 620 aa23.61■■□□□ 1.37
DNMT1-216ENST00000588952 APLP1P51693 650 aa23.61■■□□□ 1.37
DNMT1-216ENST00000588952 LRRC2Q9BYS8 371 aa23.61■■□□□ 1.37
DNMT1-216ENST00000588952 TM6SF1Q9BZW5 370 aa23.61■■□□□ 1.37
DNMT1-216ENST00000588952 PICK1Q9NRD5 415 aa23.61■■□□□ 1.37
DNMT1-216ENST00000588952 GINM1Q9NU53 330 aa23.61■■□□□ 1.37
DNMT1-216ENST00000588952 TCP11L1Q9NUJ3 509 aa23.61■■□□□ 1.37
DNMT1-216ENST00000588952 RPS6KB1P23443 525 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms