RNA–Protein interactions for RNA: ENST00000588867.1

NPC1-207, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 5

Gene NPC1, Length 2,000 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-207ENST00000588867 SPRYD3Q8NCJ5 442 aa17.06■□□□□ 0.32
NPC1-207ENST00000588867 IGDCC4Q8TDY8 1250 aa17.06■□□□□ 0.32
NPC1-207ENST00000588867 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.06■□□□□ 0.32
NPC1-207ENST00000588867 TPCN1Q9ULQ1 816 aa17.06■□□□□ 0.32
NPC1-207ENST00000588867 COL2A1P02458 1487 aaPredicted RBP17.06■□□□□ 0.32
NPC1-207ENST00000588867 SHMT1P34896 483 aa17.06■□□□□ 0.32
NPC1-207ENST00000588867 MIGA2Q7L4E1 593 aa17.06■□□□□ 0.32
NPC1-207ENST00000588867 DCPSQ96C86 337 aaKnown RBP17.06■□□□□ 0.32
NPC1-207ENST00000588867 TMX3Q96JJ7 454 aa17.06■□□□□ 0.32
NPC1-207ENST00000588867 ZSCAN10Q96SZ4 725 aaPredicted RBP17.06■□□□□ 0.32
NPC1-207ENST00000588867 TAF1DQ9H5J8 278 aaPredicted RBP17.06■□□□□ 0.32
NPC1-207ENST00000588867 DNAJC18Q9H819 358 aa17.06■□□□□ 0.32
NPC1-207ENST00000588867 ANGEL1Q9UNK9 670 aaKnown RBP17.06■□□□□ 0.32
NPC1-207ENST00000588867 POLR2AP24928 1970 aaKnown RBP17.06■□□□□ 0.32
NPC1-207ENST00000588867 POTECB2RU33 542 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 SH2B2O14492 632 aaPredicted RBP17.05■□□□□ 0.32
NPC1-207ENST00000588867 NMT2O60551 498 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 HSP90AA1P07900 732 aaKnown RBP17.05■□□□□ 0.32
NPC1-207ENST00000588867 WTAPQ15007 396 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 AGXT2Q9BYV1 514 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 SIPA1L1O43166 1804 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 TNKSO95271 1327 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 MYH8P13535 1937 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 SCN4AP35499 1836 aa17.05■□□□□ 0.32
NPC1-207ENST00000588867 MPHOSPH10O00566 681 aaKnown RBP17.04■□□□□ 0.32
NPC1-207ENST00000588867 STK3Q13188 491 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 PRAMEF18Q5VWM3 479 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 FBXL16Q8N461 479 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 ZSCAN31Q96LW9 406 aaPredicted RBP17.04■□□□□ 0.32
NPC1-207ENST00000588867 TEPSINQ96N21 525 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 SENP2Q9HC62 589 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 PGAP2Q9UHJ9 254 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 HERC5Q9UII4 1024 aaKnown RBP17.04■□□□□ 0.32
NPC1-207ENST00000588867 AKR1B1P15121 316 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 NT5C2P49902 561 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 ME3Q16798 604 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 CERKLQ49MI3 558 aaPredicted RBP17.04■□□□□ 0.32
NPC1-207ENST00000588867 METTL16Q86W50 562 aaKnown RBP17.04■□□□□ 0.32
NPC1-207ENST00000588867 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 LY9Q9HBG7 655 aa17.04■□□□□ 0.32
NPC1-207ENST00000588867 LARGE1O95461 756 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 NBPF12Q5TAG4 269 aaPredicted RBP17.03■□□□□ 0.32
NPC1-207ENST00000588867 ENAHQ8N8S7 591 aaPredicted RBP17.03■□□□□ 0.32
NPC1-207ENST00000588867 NEDD1Q8NHV4 660 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 MTA3Q9BTC8 594 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 IL17RBQ9NRM6 502 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 FOXD4L1Q9NU39 408 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 PITPNM2Q9BZ72 1349 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 WDR90Q96KV7 1748 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 KLF18A0A0U1RQI7 1052 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 CCDC69A6NI79 296 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 LIFRP42702 1097 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 TATDN1Q6P1N9 297 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 PNMA8AQ86V59 439 aaPredicted RBP17.03■□□□□ 0.32
NPC1-207ENST00000588867 SULF1Q8IWU6 871 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 TMTC2Q8N394 836 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 ZNF526Q8TF50 670 aaPredicted RBP17.03■□□□□ 0.32
NPC1-207ENST00000588867 CCDC17Q96LX7 622 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 TAOK2Q9UL54 1235 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 BRPF3Q9ULD4 1205 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 CLEC11AQ9Y240 323 aa17.03■□□□□ 0.32
NPC1-207ENST00000588867 SEC23AQ15436 765 aa17.02■□□□□ 0.32
NPC1-207ENST00000588867 IFIT1BQ5T764 474 aaKnown RBP17.02■□□□□ 0.32
NPC1-207ENST00000588867 NECAB1Q8N987 351 aa17.02■□□□□ 0.32
NPC1-207ENST00000588867 SH2B1Q9NRF2 756 aaPredicted RBP17.02■□□□□ 0.32
NPC1-207ENST00000588867 TBC1D12O60347 775 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 GDF11O95390 407 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 VEGFAP15692 232 aaPredicted RBP17.01■□□□□ 0.31
NPC1-207ENST00000588867 RAB11FIP4Q86YS3 637 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 ZC3H15Q8WU90 426 aaKnown RBP17.01■□□□□ 0.31
NPC1-207ENST00000588867 SLKQ9H2G2 1235 aaPredicted RBP17.01■□□□□ 0.31
NPC1-207ENST00000588867 TCP11L1Q9NUJ3 509 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 STX8Q9UNK0 236 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 PPP2R3BQ9Y5P8 575 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 CCDC178Q5BJE1 867 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 DLK2Q6UY11 383 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 SYNE3Q6ZMZ3 975 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 KRT26Q7Z3Y9 468 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 SLC12A7Q9Y666 1083 aa17.01■□□□□ 0.31
NPC1-207ENST00000588867 ADM5C9JUS6 153 aa17■□□□□ 0.31
NPC1-207ENST00000588867 PDIA3P30101 505 aaKnown RBP17■□□□□ 0.31
NPC1-207ENST00000588867 CCT2P78371 535 aaKnown RBP17■□□□□ 0.31
NPC1-207ENST00000588867 ABCB5Q2M3G0 1257 aa17■□□□□ 0.31
NPC1-207ENST00000588867 SGMS1Q86VZ5 419 aa17■□□□□ 0.31
NPC1-207ENST00000588867 CCDC83Q8IWF9 413 aa17■□□□□ 0.31
NPC1-207ENST00000588867 ZNF274Q96GC6 653 aaPredicted RBP17■□□□□ 0.31
NPC1-207ENST00000588867 CEP95Q96GE4 821 aa17■□□□□ 0.31
NPC1-207ENST00000588867 GOLGA8BA8MQT2 603 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 EVCP57679 992 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 RRP1BQ14684 758 aaKnown RBP16.99■□□□□ 0.31
NPC1-207ENST00000588867 SHROOM1Q2M3G4 852 aaPredicted RBP16.99■□□□□ 0.31
NPC1-207ENST00000588867 USP48Q86UV5 1035 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 DGKHQ86XP1 1220 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 HOOK2Q96ED9 719 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 MYL10Q9BUA6 226 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.99■□□□□ 0.31
NPC1-207ENST00000588867 CABP5Q9NP86 173 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 RXRAP19793 462 aa16.99■□□□□ 0.31
NPC1-207ENST00000588867 MAP3K10Q02779 954 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms