RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 RBM8AQ9Y5S9 174 aaKnown RBP22.56■■□□□ 1.2
CLPTM1-209ENST00000588855 ZNF213O14771 459 aa22.55■■□□□ 1.2
CLPTM1-209ENST00000588855 PRDM1O75626 825 aa22.55■■□□□ 1.2
CLPTM1-209ENST00000588855 SLC3A2P08195 630 aaKnown RBP22.55■■□□□ 1.2
CLPTM1-209ENST00000588855 TBC1D10CQ8IV04 446 aa22.55■■□□□ 1.2
CLPTM1-209ENST00000588855 INCENPQ9NQS7 918 aa22.55■■□□□ 1.2
CLPTM1-209ENST00000588855 GREB1LQ9C091 1923 aaPredicted RBP22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 SLC10A3P09131 477 aa22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 RASA1P20936 1047 aa22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 GRM1Q13255 1194 aa22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 IMMTQ16891 758 aaKnown RBP22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 CCDC84Q86UT8 332 aaPredicted RBP22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 MKNK2Q9HBH9 465 aa22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 ZBTB21Q9ULJ3 1066 aa22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.54■■□□□ 1.2
CLPTM1-209ENST00000588855 SPDYE5A6NIY4 337 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 FAM155AB1AL88 458 aaPredicted RBP22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 GH2P01242 217 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 AKR1B1P15121 316 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 GJA5P36382 358 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 PDE4BQ07343 736 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 ABCB5Q2M3G0 1257 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 OPTNQ96CV9 577 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 OTUD5Q96G74 571 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 WNK4Q96J92 1243 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 CAPNS2Q96L46 248 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 PICK1Q9NRD5 415 aa22.53■■□□□ 1.2
CLPTM1-209ENST00000588855 ASNSP08243 561 aa22.52■■□□□ 1.2
CLPTM1-209ENST00000588855 CYP21A2P08686 494 aa22.52■■□□□ 1.2
CLPTM1-209ENST00000588855 PTPRAP18433 802 aa22.52■■□□□ 1.2
CLPTM1-209ENST00000588855 MKRN3Q13064 507 aaKnown RBP22.52■■□□□ 1.2
CLPTM1-209ENST00000588855 PTPRFP10586 1907 aa22.52■■□□□ 1.19
CLPTM1-209ENST00000588855 MPHOSPH10O00566 681 aaKnown RBP22.52■■□□□ 1.19
CLPTM1-209ENST00000588855 AKNAD1Q5T1N1 836 aa22.52■■□□□ 1.19
CLPTM1-209ENST00000588855 ERO1BQ86YB8 467 aa22.52■■□□□ 1.19
CLPTM1-209ENST00000588855 STAG1Q8WVM7 1258 aa22.52■■□□□ 1.19
CLPTM1-209ENST00000588855 CCDC102AQ96A19 550 aa22.52■■□□□ 1.19
CLPTM1-209ENST00000588855 ZNF287Q9HBT7 754 aa22.52■■□□□ 1.19
CLPTM1-209ENST00000588855 THSD7BQ9C0I4 1608 aa22.51■■□□□ 1.19
CLPTM1-209ENST00000588855 REC8O95072 547 aa22.51■■□□□ 1.19
CLPTM1-209ENST00000588855 FGRP09769 529 aa22.51■■□□□ 1.19
CLPTM1-209ENST00000588855 GUCY1A2P33402 732 aa22.51■■□□□ 1.19
CLPTM1-209ENST00000588855 VEGFBP49765 207 aa22.51■■□□□ 1.19
CLPTM1-209ENST00000588855 SPRYD7Q5W111 196 aa22.51■■□□□ 1.19
CLPTM1-209ENST00000588855 CCDC17Q96LX7 622 aa22.51■■□□□ 1.19
CLPTM1-209ENST00000588855 TAF6LQ9Y6J9 622 aa22.51■■□□□ 1.19
CLPTM1-209ENST00000588855 NEDD4P46934 1319 aa22.5■■□□□ 1.19
CLPTM1-209ENST00000588855 ORC4O43929 436 aa22.5■■□□□ 1.19
CLPTM1-209ENST00000588855 ECE1P42892 770 aa22.5■■□□□ 1.19
CLPTM1-209ENST00000588855 PPATQ06203 517 aa22.5■■□□□ 1.19
CLPTM1-209ENST00000588855 C8orf34Q49A92 452 aa22.5■■□□□ 1.19
CLPTM1-209ENST00000588855 CABP5Q9NP86 173 aa22.5■■□□□ 1.19
CLPTM1-209ENST00000588855 TOMM22Q9NS69 142 aa22.5■■□□□ 1.19
CLPTM1-209ENST00000588855 GINM1Q9NU53 330 aa22.5■■□□□ 1.19
CLPTM1-209ENST00000588855 WDR33Q9C0J8 1336 aaKnown RBP22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 PCNTO95613 3336 aa22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 PPIL2Q13356 520 aa22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 SEPT2Q15019 361 aa22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 RAB3GAP1Q15042 981 aa22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 NECTIN1Q15223 517 aa22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 MFSD6Q6ZSS7 791 aa22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 TMEM179Q6ZVK1 233 aa22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 ZNF444Q8N0Y2 327 aaPredicted RBP22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 ZHX2Q9Y6X8 837 aa22.49■■□□□ 1.19
CLPTM1-209ENST00000588855 USP17L5A8MUK1 530 aa22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 IRF6O14896 467 aa22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 AOC2O75106 756 aa22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 ZBTB48P10074 688 aaPredicted RBP22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 FAM47AQ5JRC9 791 aa22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 RRP12Q5JTH9 1297 aaKnown RBP22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 CREB3L3Q68CJ9 461 aa22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 CLEC10AQ8IUN9 316 aa22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 RNF41Q9H4P4 317 aaPredicted RBP22.48■■□□□ 1.19
CLPTM1-209ENST00000588855 SLC27A2O14975 620 aa22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 RANBP6O60518 1105 aaKnown RBP22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 PCP11498 1178 aaKnown RBP22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 NKX2-3Q8TAU0 364 aa22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 ZIC5Q96T25 663 aa22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 PLIN4Q96Q06 1357 aa22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 DNAJC5GQ8N7S2 189 aa22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 AFG3L2Q9Y4W6 797 aa22.47■■□□□ 1.19
CLPTM1-209ENST00000588855 MYH4Q9Y623 1939 aa22.46■■□□□ 1.19
CLPTM1-209ENST00000588855 TSPY2A6NKD2 308 aa22.46■■□□□ 1.19
CLPTM1-209ENST00000588855 TSPY3P0CV98 308 aa22.46■■□□□ 1.19
CLPTM1-209ENST00000588855 TSPY8P0CW00 308 aa22.46■■□□□ 1.19
CLPTM1-209ENST00000588855 TFAP4Q01664 338 aa22.46■■□□□ 1.19
CLPTM1-209ENST00000588855 NOGQ13253 232 aa22.46■■□□□ 1.19
CLPTM1-209ENST00000588855 STOX1Q6ZVD7 989 aa22.46■■□□□ 1.19
CLPTM1-209ENST00000588855 TRIM75PA6NK02 468 aa22.45■■□□□ 1.18
CLPTM1-209ENST00000588855 E7EWF7 191 aa22.45■■□□□ 1.18
CLPTM1-209ENST00000588855 SEC24BO95487 1268 aa22.45■■□□□ 1.18
CLPTM1-209ENST00000588855 NEDD1Q8NHV4 660 aa22.45■■□□□ 1.18
CLPTM1-209ENST00000588855 AS3MTQ9HBK9 375 aa22.45■■□□□ 1.18
CLPTM1-209ENST00000588855 KCNH4Q9UQ05 1017 aa22.45■■□□□ 1.18
CLPTM1-209ENST00000588855 IGKV6D-41A0A0C4DH26 115 aa22.44■■□□□ 1.18
CLPTM1-209ENST00000588855 B4E1Z4 1266 aa22.44■■□□□ 1.18
CLPTM1-209ENST00000588855 KIF23Q02241 960 aaPredicted RBP22.44■■□□□ 1.18
CLPTM1-209ENST00000588855 SPP2Q13103 211 aa22.44■■□□□ 1.18
CLPTM1-209ENST00000588855 ZNF280CQ8ND82 737 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms