RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 ZNF444Q8N0Y2 327 aaPredicted RBP19.25■□□□□ 0.67
NFIX-210ENST00000588228 PHKBQ93100 1093 aa19.25■□□□□ 0.67
NFIX-210ENST00000588228 ALG1Q9BT22 464 aa19.25■□□□□ 0.67
NFIX-210ENST00000588228 TCP11L1Q9NUJ3 509 aa19.25■□□□□ 0.67
NFIX-210ENST00000588228 PIM2Q9P1W9 311 aa19.25■□□□□ 0.67
NFIX-210ENST00000588228 ELP1O95163 1332 aa19.25■□□□□ 0.67
NFIX-210ENST00000588228 GADD45BO75293 160 aaPredicted RBP19.24■□□□□ 0.67
NFIX-210ENST00000588228 GUCY1B3Q02153 619 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 CDC42EP5Q6NZY7 148 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 DGKHQ86XP1 1220 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 WASF1Q92558 559 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 ANKS1AQ92625 1134 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 SLC26A6Q9BXS9 759 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 RBM28Q9NW13 759 aaKnown RBP19.24■□□□□ 0.67
NFIX-210ENST00000588228 YDJCA8MPS7 323 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 TSPY3P0CV98 308 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 TSPY8P0CW00 308 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 RASA1P20936 1047 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 CDK8P49336 464 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 TROAPQ12815 778 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 ATL3Q6DD88 541 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 CAVIN1Q6NZI2 390 aaKnown RBP19.24■□□□□ 0.67
NFIX-210ENST00000588228 TTC6Q86TZ1 520 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 TRIM22Q8IYM9 498 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 SERPINA10Q9UK55 444 aa19.24■□□□□ 0.67
NFIX-210ENST00000588228 NMT2O60551 498 aa19.23■□□□□ 0.67
NFIX-210ENST00000588228 R3HDM1Q15032 1099 aaKnown RBP19.23■□□□□ 0.67
NFIX-210ENST00000588228 NBPF11Q86T75 865 aa19.23■□□□□ 0.67
NFIX-210ENST00000588228 SLC44A5Q8NCS7 719 aa19.23■□□□□ 0.67
NFIX-210ENST00000588228 DDX4Q9NQI0 724 aaKnown RBP19.23■□□□□ 0.67
NFIX-210ENST00000588228 CFAP45Q9UL16 551 aa19.23■□□□□ 0.67
NFIX-210ENST00000588228 CDK5RAP2Q96SN8 1893 aa19.22■□□□□ 0.67
NFIX-210ENST00000588228 PICALMQ13492 652 aa19.22■□□□□ 0.67
NFIX-210ENST00000588228 RCSD1Q6JBY9 416 aa19.22■□□□□ 0.67
NFIX-210ENST00000588228 CRACR2BQ8N4Y2 399 aaPredicted RBP19.22■□□□□ 0.67
NFIX-210ENST00000588228 IL17RBQ9NRM6 502 aa19.22■□□□□ 0.67
NFIX-210ENST00000588228 SCN9AQ15858 1988 aa19.21■□□□□ 0.67
NFIX-210ENST00000588228 ZNF646O15015 1829 aaPredicted RBP19.21■□□□□ 0.67
NFIX-210ENST00000588228 MYO3BQ8WXR4 1341 aa19.21■□□□□ 0.67
NFIX-210ENST00000588228 DEXIO95424 95 aa19.21■□□□□ 0.67
NFIX-210ENST00000588228 OTUD7BQ6GQQ9 843 aa19.21■□□□□ 0.67
NFIX-210ENST00000588228 LARGE2Q8N3Y3 721 aa19.21■□□□□ 0.67
NFIX-210ENST00000588228 RNF26Q9BY78 433 aaPredicted RBP19.21■□□□□ 0.67
NFIX-210ENST00000588228 OSBPL5Q9H0X9 879 aaPredicted RBP19.21■□□□□ 0.67
NFIX-210ENST00000588228 FOCADQ5VW36 1801 aa19.21■□□□□ 0.67
NFIX-210ENST00000588228 TRIM29Q14134 588 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 DALRD3Q5D0E6 543 aaKnown RBP19.2■□□□□ 0.66
NFIX-210ENST00000588228 BRAPQ7Z569 592 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 LEO1Q8WVC0 666 aaPredicted RBP19.2■□□□□ 0.66
NFIX-210ENST00000588228 SYAP1Q96A49 352 aaPredicted RBP19.2■□□□□ 0.66
NFIX-210ENST00000588228 SPATA32Q96LK8 384 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 ZNF396Q96N95 335 aaPredicted RBP19.2■□□□□ 0.66
NFIX-210ENST00000588228 KAT14Q9H8E8 782 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 ZNF277Q9NRM2 450 aaPredicted RBP19.2■□□□□ 0.66
NFIX-210ENST00000588228 TFIP11Q9UBB9 837 aaKnown RBP19.2■□□□□ 0.66
NFIX-210ENST00000588228 ISY1Q9ULR0 285 aaKnown RBP19.2■□□□□ 0.66
NFIX-210ENST00000588228 GABPAQ06546 454 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 KRT40Q6A162 431 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 NEDD1Q8NHV4 660 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 CTCFLQ8NI51 663 aaPredicted RBP19.2■□□□□ 0.66
NFIX-210ENST00000588228 UPF1Q92900 1129 aaKnown RBP eCLIP19.2■□□□□ 0.66
NFIX-210ENST00000588228 AIFM3Q96NN9 605 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 MAP3K14Q99558 947 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 SGIP1Q9BQI5 828 aa19.2■□□□□ 0.66
NFIX-210ENST00000588228 NPM3O75607 178 aaKnown RBP19.19■□□□□ 0.66
NFIX-210ENST00000588228 RBM5P52756 815 aaKnown RBP eCLIP19.19■□□□□ 0.66
NFIX-210ENST00000588228 KIF23Q02241 960 aaPredicted RBP19.19■□□□□ 0.66
NFIX-210ENST00000588228 ZSCAN23Q3MJ62 389 aa19.19■□□□□ 0.66
NFIX-210ENST00000588228 IDI2Q9BXS1 227 aa19.19■□□□□ 0.66
NFIX-210ENST00000588228 GJB4Q9NTQ9 266 aa19.19■□□□□ 0.66
NFIX-210ENST00000588228 TMEM63CQ9P1W3 806 aa19.19■□□□□ 0.66
NFIX-210ENST00000588228 RBM27Q9P2N5 1060 aaKnown RBP19.19■□□□□ 0.66
NFIX-210ENST00000588228 FSD2A1L4K1 749 aa19.18■□□□□ 0.66
NFIX-210ENST00000588228 HLA-DOAP06340 250 aa19.18■□□□□ 0.66
NFIX-210ENST00000588228 ZNF445P59923 1031 aa19.18■□□□□ 0.66
NFIX-210ENST00000588228 AKAP17AQ02040 695 aaKnown RBP19.18■□□□□ 0.66
NFIX-210ENST00000588228 FUT2Q10981 343 aa19.18■□□□□ 0.66
NFIX-210ENST00000588228 RSBN1LQ6PCB5 846 aaPredicted RBP19.18■□□□□ 0.66
NFIX-210ENST00000588228 TMTC3Q6ZXV5 915 aa19.18■□□□□ 0.66
NFIX-210ENST00000588228 SWAP70Q9UH65 585 aa19.18■□□□□ 0.66
NFIX-210ENST00000588228 CD2APQ9Y5K6 639 aa19.18■□□□□ 0.66
NFIX-210ENST00000588228 ADAMTSL1Q8N6G6 1762 aa19.18■□□□□ 0.66
NFIX-210ENST00000588228 GOLGA6L3A6NEY3 463 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 VIL1P09327 827 aaKnown RBP19.17■□□□□ 0.66
NFIX-210ENST00000588228 KIF5BP33176 963 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 GUCY1A2P33402 732 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 NFIAQ12857 509 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 NIM1KQ8IY84 436 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 CCDC82Q8N4S0 544 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 PNMA1Q8ND90 353 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 SERPINB13Q9UIV8 391 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 PLIN4Q96Q06 1357 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 PRPF3O43395 683 aaKnown RBP19.17■□□□□ 0.66
NFIX-210ENST00000588228 PLEKHA8P1O95397 391 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 CMTR1Q8N1G2 835 aaKnown RBP19.17■□□□□ 0.66
NFIX-210ENST00000588228 EHD4Q9H223 541 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 DHX36Q9H2U1 1008 aaKnown RBP19.17■□□□□ 0.66
NFIX-210ENST00000588228 RCOR1Q9UKL0 485 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 ZNRF3Q9ULT6 936 aa19.17■□□□□ 0.66
NFIX-210ENST00000588228 PCDHAC2Q9Y5I4 1007 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms