RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ERICH2A1L162 156 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 TTC36A6NLP5 189 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 ZBTB43O43298 467 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 KDM4AO75164 1064 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
LINC01539-201ENST00000587904 IL1R1P14778 569 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 NPR1P16066 1061 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 TEX35Q5T0J7 233 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 COL23A1Q86Y22 540 aaPredicted RBP11.1□□□□□ -0.63
LINC01539-201ENST00000587904 DEF6Q9H4E7 631 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 TMEM63CQ9P1W3 806 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 ARPP21Q9UBL0 812 aaPredicted RBP11.1□□□□□ -0.63
LINC01539-201ENST00000587904 PAXBP1Q9Y5B6 917 aa11.1□□□□□ -0.63
LINC01539-201ENST00000587904 KIF3CO14782 793 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 PPEF1O14829 653 aaPredicted RBP11.09□□□□□ -0.63
LINC01539-201ENST00000587904 IFIT3O14879 490 aaKnown RBP11.09□□□□□ -0.63
LINC01539-201ENST00000587904 PRDX5P30044 214 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 PDE6BP35913 854 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 SYNE3Q6ZMZ3 975 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 NFXL1Q6ZNB6 911 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 FERMT3Q86UX7 667 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 SUGP1Q8IWZ8 645 aaKnown RBP11.09□□□□□ -0.63
LINC01539-201ENST00000587904 SP8Q8IXZ3 490 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 GPATCH11Q8N954 259 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 SDR42E1Q8WUS8 393 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 ZNF446Q9NWS9 450 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 ZSWIM5Q9P217 1185 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 NSFL1CQ9UNZ2 370 aaKnown RBP11.09□□□□□ -0.63
LINC01539-201ENST00000587904 STK36Q9NRP7 1315 aa11.09□□□□□ -0.63
LINC01539-201ENST00000587904 CCDC69A6NI79 296 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 GADD45BO75293 160 aaPredicted RBP11.08□□□□□ -0.63
LINC01539-201ENST00000587904 LDHCP07864 332 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 SLC3A2P08195 630 aaKnown RBP11.08□□□□□ -0.63
LINC01539-201ENST00000587904 FGRP09769 529 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 SSR1P43307 286 aaKnown RBP11.08□□□□□ -0.63
LINC01539-201ENST00000587904 SBK1Q52WX2 424 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 CCDC183Q5T5S1 534 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 RNF217Q8TC41 542 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 TBC1D22AQ8WUA7 517 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 SUFUQ9UMX1 484 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 SLC12A7Q9Y666 1083 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 PARP3Q9Y6F1 533 aa11.08□□□□□ -0.63
LINC01539-201ENST00000587904 PPP1R12AO14974 1030 aaPredicted RBP11.08□□□□□ -0.64
LINC01539-201ENST00000587904 BAG3O95817 575 aa11.08□□□□□ -0.64
LINC01539-201ENST00000587904 FDPSP14324 419 aaKnown RBP11.08□□□□□ -0.64
LINC01539-201ENST00000587904 DYNLL1P63167 89 aaKnown RBP11.08□□□□□ -0.64
LINC01539-201ENST00000587904 WTAPQ15007 396 aa11.08□□□□□ -0.64
LINC01539-201ENST00000587904 PPP2R5BQ15173 497 aa11.08□□□□□ -0.64
LINC01539-201ENST00000587904 SYT10Q6XYQ8 523 aa11.08□□□□□ -0.64
LINC01539-201ENST00000587904 UBAC1Q9BSL1 405 aa11.08□□□□□ -0.64
LINC01539-201ENST00000587904 CD209Q9NNX6 404 aa11.08□□□□□ -0.64
LINC01539-201ENST00000587904 ORC3Q9UBD5 711 aaPredicted RBP11.08□□□□□ -0.64
LINC01539-201ENST00000587904 ATP6V0A2Q9Y487 856 aa11.08□□□□□ -0.64
LINC01539-201ENST00000587904 DLEC1Q9Y238 1755 aa11.08□□□□□ -0.64
LINC01539-201ENST00000587904 COL11A2P13942 1736 aaPredicted RBP11.08□□□□□ -0.64
LINC01539-201ENST00000587904 CCDC196A0A1B0GTZ2 297 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 CCDC189A1A4V9 331 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 SYCE3A1L190 88 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 GOLGA8AA7E2F4 631 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 MINDY4BA8MYZ0 360 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 ORC4O43929 436 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 SRGNP10124 158 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 ALDH1B1P30837 517 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 SEMA3FQ13275 785 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 ZKSCAN8Q15776 578 aaPredicted RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 SRCAPQ6ZRS2 3230 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 SLF2Q8IX21 1173 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 TBC1D16Q8TBP0 767 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 C8orf76Q96K31 380 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 SPATA32Q96LK8 384 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 ZNF396Q96N95 335 aaPredicted RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 DCP1AQ9NPI6 582 aaPredicted RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 TOMM22Q9NS69 142 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 AATFQ9NY61 560 aaKnown RBP eCLIP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 RBM27Q9P2N5 1060 aaKnown RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 DTNBO60941 627 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 PPP4CP60510 307 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 TTC31Q49AM3 519 aaPredicted RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 RRP12Q5JTH9 1297 aaKnown RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 BRAPQ7Z569 592 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 TTC6Q86TZ1 520 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 FBXO18Q8NFZ0 1043 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 WASF1Q92558 559 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 TMX1Q9H3N1 280 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 TTC12Q9H892 705 aaPredicted RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 TACC3Q9Y6A5 838 aa11.07□□□□□ -0.64
LINC01539-201ENST00000587904 BAZ2AQ9UIF9 1905 aaKnown RBP11.07□□□□□ -0.64
LINC01539-201ENST00000587904 MROH7-TTC4A0A0A0MT08 1334 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 FAM205AQ6ZU69 1335 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 MMP10P09238 476 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 MICU3Q86XE3 530 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 IQCA1Q86XH1 822 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 AMOTL1Q8IY63 956 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 C10orf67Q8IYJ2 551 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 LEO1Q8WVC0 666 aaPredicted RBP11.06□□□□□ -0.64
LINC01539-201ENST00000587904 MASTLQ96GX5 879 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 SGSM3Q96HU1 749 aa11.06□□□□□ -0.64
LINC01539-201ENST00000587904 TMX4Q9H1E5 349 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms