RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 MAST2Q6P0Q8 1798 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 NPM3O75607 178 aaKnown RBP10.58□□□□□ -0.72
SDF2-204ENST00000587338 CENPBP07199 599 aaPredicted RBP10.58□□□□□ -0.72
SDF2-204ENST00000587338 UBTFL1P0CB47 393 aaPredicted RBP10.58□□□□□ -0.72
SDF2-204ENST00000587338 HOXA7P31268 230 aaPredicted RBP10.58□□□□□ -0.72
SDF2-204ENST00000587338 IL15P40933 162 aaPredicted RBP10.58□□□□□ -0.72
SDF2-204ENST00000587338 BACE1P56817 501 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 ERVK-9P63128 1117 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 ERVK-24P63145 666 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 MORN1Q5T089 497 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 PLEKHH3Q7Z736 793 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 TEX11Q8IYF3 940 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 ZNF384Q8TF68 577 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 MYLIPQ8WY64 445 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 USP6NLQ92738 828 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 WDR18Q9BV38 432 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 RBPJLQ9UBG7 517 aa10.58□□□□□ -0.72
SDF2-204ENST00000587338 HERC5Q9UII4 1024 aaKnown RBP10.58□□□□□ -0.72
SDF2-204ENST00000587338 PA2G4Q9UQ80 394 aaKnown RBP10.58□□□□□ -0.72
SDF2-204ENST00000587338 ASNSP08243 561 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 FOSL2P15408 326 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 CNGA1P29973 690 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 RTP1P59025 263 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 TIMM10P62072 90 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 GSTO1P78417 241 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 MAP2K5Q13163 448 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 SHHQ15465 462 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 Q3C1V9 767 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 C9orf50Q5SZB4 431 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 WDR78Q5VTH9 848 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 MFSD14CQ5VZR4 134 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 SEMA6BQ9H3T3 888 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 PRDM5Q9NQX1 630 aaPredicted RBP10.57□□□□□ -0.72
SDF2-204ENST00000587338 RAI14Q9P0K7 980 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 ATP11BQ9Y2G3 1177 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 NDUFB9Q9Y6M9 179 aa10.57□□□□□ -0.72
SDF2-204ENST00000587338 FRMPD3Q5JV73 1810 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 USP17L10C9JJH3 530 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 ZBTB22O15209 634 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 GDF11O95390 407 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 MAP4K4O95819 1239 aaPredicted RBP10.56□□□□□ -0.72
SDF2-204ENST00000587338 LDHCP07864 332 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 MVPQ14764 893 aaKnown RBP10.56□□□□□ -0.72
SDF2-204ENST00000587338 SHROOM1Q2M3G4 852 aaPredicted RBP10.56□□□□□ -0.72
SDF2-204ENST00000587338 PI16Q6UXB8 463 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 TBC1D9Q6ZT07 1266 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 SH3RF3Q8TEJ3 882 aaPredicted RBP10.56□□□□□ -0.72
SDF2-204ENST00000587338 GTF3C2Q8WUA4 911 aaPredicted RBP10.56□□□□□ -0.72
SDF2-204ENST00000587338 NSUN4Q96CB9 384 aaKnown RBP10.56□□□□□ -0.72
SDF2-204ENST00000587338 TRIM34Q9BYJ4 488 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 FLRT1Q9NZU1 646 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 PI4KBQ9UBF8 816 aa10.56□□□□□ -0.72
SDF2-204ENST00000587338 DDX20Q9UHI6 824 aaKnown RBP10.56□□□□□ -0.72
SDF2-204ENST00000587338 A0A1B0GUL7 405 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 C19orf81C9J6K1 198 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 DNM1LO00429 736 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 MSCO60682 206 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 GLRX3O76003 335 aaKnown RBP10.55□□□□□ -0.72
SDF2-204ENST00000587338 JAG1P78504 1218 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 CRACR2BQ8N4Y2 399 aaPredicted RBP10.55□□□□□ -0.72
SDF2-204ENST00000587338 SSH1Q8WYL5 1049 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 LPAR1Q92633 364 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 SYMPKQ92797 1274 aaKnown RBP10.55□□□□□ -0.72
SDF2-204ENST00000587338 EDC3Q96F86 508 aaKnown RBP10.55□□□□□ -0.72
SDF2-204ENST00000587338 XAGE2Q96GT9 111 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 NOL10Q9BSC4 688 aaKnown RBP10.55□□□□□ -0.72
SDF2-204ENST00000587338 TTYH1Q9H313 450 aaPredicted RBP10.55□□□□□ -0.72
SDF2-204ENST00000587338 HMG20BQ9P0W2 317 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 BDP1A6H8Y1 2624 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 LTBP2Q14767 1821 aa10.55□□□□□ -0.72
SDF2-204ENST00000587338 MYCNP04198 464 aaPredicted RBP10.54□□□□□ -0.72
SDF2-204ENST00000587338 COL9A1P20849 921 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 CCNA1P78396 465 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 SMAD3P84022 425 aaKnown RBP10.54□□□□□ -0.72
SDF2-204ENST00000587338 ATP2B2Q01814 1243 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 TFCP2Q12800 502 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 ZYXQ15942 572 aaKnown RBP10.54□□□□□ -0.72
SDF2-204ENST00000587338 GJC2Q5T442 439 aaPredicted RBP10.54□□□□□ -0.72
SDF2-204ENST00000587338 POTEEQ6S8J3 1075 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 MAPKAPK5Q8IW41 473 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 SPATA5Q8NB90 893 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 BADQ92934 168 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 NEUROD6Q96NK8 337 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 FEZ1Q99689 392 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 DHX36Q9H2U1 1008 aaKnown RBP10.54□□□□□ -0.72
SDF2-204ENST00000587338 DNAJC18Q9H819 358 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 ZBTB21Q9ULJ3 1066 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 AKAP2Q9Y2D5 859 aa10.54□□□□□ -0.72
SDF2-204ENST00000587338 SLC15A5A6NIM6 579 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 KBTBD13C9JR72 458 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 CYP2C19P33261 490 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 TRIM60Q495X7 471 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 GORABQ5T7V8 394 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 USP17L2Q6R6M4 530 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 COPRSQ9NQ92 184 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 EMILIN3Q9NT22 766 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 AATFQ9NY61 560 aaKnown RBP eCLIP10.53□□□□□ -0.72
SDF2-204ENST00000587338 LRP2BPQ9P2M1 347 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 RABGAP1Q9Y3P9 1069 aa10.53□□□□□ -0.72
SDF2-204ENST00000587338 IVNS1ABPQ9Y6Y0 642 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms