RNA–Protein interactions for RNA: ENST00000587171.1

H3F3B-205, Transcript of H3 histone family member 3B, humanhuman

TSL 2

Gene H3F3B, Length 586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-205ENST00000587171 SHROOM1Q2M3G4 852 aaPredicted RBP15.98■□□□□ 0.15
H3F3B-205ENST00000587171 SMCR8Q8TEV9 937 aaPredicted RBP15.98■□□□□ 0.15
H3F3B-205ENST00000587171 HAUS7Q99871 368 aa15.98■□□□□ 0.15
H3F3B-205ENST00000587171 BOLA2Q9H3K6 86 aa15.98■□□□□ 0.15
H3F3B-205ENST00000587171 SERPINB13Q9UIV8 391 aa15.98■□□□□ 0.15
H3F3B-205ENST00000587171 PNMA3Q9UL41 463 aa15.98■□□□□ 0.15
H3F3B-205ENST00000587171 ZBTB21Q9ULJ3 1066 aa15.98■□□□□ 0.15
H3F3B-205ENST00000587171 MYH8P13535 1937 aa15.98■□□□□ 0.15
H3F3B-205ENST00000587171 BAZ2AQ9UIF9 1905 aaKnown RBP15.98■□□□□ 0.15
H3F3B-205ENST00000587171 SMARCA5O60264 1052 aaPredicted RBP15.97■□□□□ 0.15
H3F3B-205ENST00000587171 GDF11O95390 407 aa15.97■□□□□ 0.15
H3F3B-205ENST00000587171 FMNL1O95466 1100 aaPredicted RBP15.97■□□□□ 0.15
H3F3B-205ENST00000587171 HOXD10P28358 340 aa15.97■□□□□ 0.15
H3F3B-205ENST00000587171 FCGRTP55899 365 aa15.97■□□□□ 0.15
H3F3B-205ENST00000587171 BACE1P56817 501 aa15.97■□□□□ 0.15
H3F3B-205ENST00000587171 TATDN1Q6P1N9 297 aa15.97■□□□□ 0.15
H3F3B-205ENST00000587171 TTC6Q86TZ1 520 aa15.97■□□□□ 0.15
H3F3B-205ENST00000587171 CRNKL1Q9BZJ0 848 aaKnown RBP15.97■□□□□ 0.15
H3F3B-205ENST00000587171 DCTPP1Q9H773 170 aa15.97■□□□□ 0.15
H3F3B-205ENST00000587171 CEP290O15078 2479 aa15.97■□□□□ 0.15
H3F3B-205ENST00000587171 MYPNQ86TC9 1320 aa15.96■□□□□ 0.15
H3F3B-205ENST00000587171 PABPC4Q13310 644 aaKnown RBP eCLIP15.96■□□□□ 0.15
H3F3B-205ENST00000587171 MTMR2Q13614 643 aa15.96■□□□□ 0.15
H3F3B-205ENST00000587171 SH3TC2Q8TF17 1288 aa15.96■□□□□ 0.15
H3F3B-205ENST00000587171 C19orf81C9J6K1 198 aa15.95■□□□□ 0.14
H3F3B-205ENST00000587171 ADD2P35612 726 aa15.95■□□□□ 0.14
H3F3B-205ENST00000587171 PLCD1P51178 756 aa15.95■□□□□ 0.14
H3F3B-205ENST00000587171 FAM110CQ1W6H9 321 aa15.95■□□□□ 0.14
H3F3B-205ENST00000587171 LCORLQ8N3X6 602 aa15.95■□□□□ 0.14
H3F3B-205ENST00000587171 TMEM106CQ9BVX2 250 aa15.95■□□□□ 0.14
H3F3B-205ENST00000587171 USP17L10C9JJH3 530 aa15.94■□□□□ 0.14
H3F3B-205ENST00000587171 GH2P01242 217 aa15.94■□□□□ 0.14
H3F3B-205ENST00000587171 GCLCP48506 637 aaPredicted RBP15.94■□□□□ 0.14
H3F3B-205ENST00000587171 RRP1P56182 461 aaKnown RBP15.94■□□□□ 0.14
H3F3B-205ENST00000587171 PRKCZQ05513 592 aa15.94■□□□□ 0.14
H3F3B-205ENST00000587171 ANKRD13CQ8N6S4 541 aa15.94■□□□□ 0.14
H3F3B-205ENST00000587171 RAET1EQ8TD07 263 aa15.94■□□□□ 0.14
H3F3B-205ENST00000587171 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.94■□□□□ 0.141e-8■■■■■ 50
H3F3B-205ENST00000587171 ASCC2Q9H1I8 757 aaPredicted RBP15.94■□□□□ 0.14
H3F3B-205ENST00000587171 DCP1AQ9NPI6 582 aaPredicted RBP15.94■□□□□ 0.14
H3F3B-205ENST00000587171 TMOD4Q9NZQ9 345 aa15.94■□□□□ 0.14
H3F3B-205ENST00000587171 POLR3DP05423 398 aaPredicted RBP15.93■□□□□ 0.14
H3F3B-205ENST00000587171 HOXA7P31268 230 aaPredicted RBP15.93■□□□□ 0.14
H3F3B-205ENST00000587171 GRK4P32298 578 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 SHMT1P34896 483 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 GABPAQ06546 454 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 UBE3CQ15386 1083 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 SLFNL1Q499Z3 407 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 SDR42E1Q8WUS8 393 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 ARMT1Q9H993 441 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 ECHDC1Q9NTX5 307 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 MCM9Q9NXL9 1143 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 PCDHB15Q9Y5E8 787 aa15.93■□□□□ 0.14
H3F3B-205ENST00000587171 TNPO2O14787 897 aaKnown RBP15.92■□□□□ 0.14
H3F3B-205ENST00000587171 MBD4O95243 580 aa15.92■□□□□ 0.14
H3F3B-205ENST00000587171 EN2P19622 333 aaPredicted RBP15.92■□□□□ 0.14
H3F3B-205ENST00000587171 CERKLQ49MI3 558 aaPredicted RBP15.92■□□□□ 0.14
H3F3B-205ENST00000587171 GABRQQ9UN88 632 aa15.92■□□□□ 0.14
H3F3B-205ENST00000587171 MYCP01106 439 aaPredicted RBP15.91■□□□□ 0.14
H3F3B-205ENST00000587171 CHGBP05060 677 aa15.91■□□□□ 0.14
H3F3B-205ENST00000587171 IRX3P78415 501 aaPredicted RBP15.91■□□□□ 0.14
H3F3B-205ENST00000587171 EVX2Q03828 476 aa15.91■□□□□ 0.14
H3F3B-205ENST00000587171 ABCB5Q2M3G0 1257 aa15.91■□□□□ 0.14
H3F3B-205ENST00000587171 EMILIN3Q9NT22 766 aa15.91■□□□□ 0.14
H3F3B-205ENST00000587171 ATP8A2Q9NTI2 1148 aa15.91■□□□□ 0.14
H3F3B-205ENST00000587171 PLXNB2O15031 1838 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 PRKAB2O43741 272 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 FLT3LGP49771 235 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 IRF5Q13568 498 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 RAB3GAP1Q15042 981 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 MTFR1Q15390 333 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 ZSCAN25Q6NSZ9 544 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 USP17L2Q6R6M4 530 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 SLAIN1Q8ND83 568 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 C12orf42Q96LP6 360 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 CABP5Q9NP86 173 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 MORF4L1Q9UBU8 362 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 TAOK2Q9UL54 1235 aa15.9■□□□□ 0.14
H3F3B-205ENST00000587171 CYP2D6P10635 497 aa15.89■□□□□ 0.13
H3F3B-205ENST00000587171 GUCY1A2P33402 732 aa15.89■□□□□ 0.13
H3F3B-205ENST00000587171 HERVK_113P62684 666 aa15.89■□□□□ 0.13
H3F3B-205ENST00000587171 PRPF38BQ5VTL8 546 aaKnown RBP15.89■□□□□ 0.13
H3F3B-205ENST00000587171 COA7Q96BR5 231 aa15.89■□□□□ 0.13
H3F3B-205ENST00000587171 GPATCH3Q96I76 525 aa15.89■□□□□ 0.13
H3F3B-205ENST00000587171 P2RX7Q99572 595 aaKnown RBP15.89■□□□□ 0.13
H3F3B-205ENST00000587171 KIAA1683Q9H0B3 1180 aa15.89■□□□□ 0.13
H3F3B-205ENST00000587171 PUS7LQ9H0K6 701 aaKnown RBP15.89■□□□□ 0.13
H3F3B-205ENST00000587171 ADCY3O60266 1144 aa15.88■□□□□ 0.13
H3F3B-205ENST00000587171 USP14P54578 494 aa15.88■□□□□ 0.13
H3F3B-205ENST00000587171 TSHZ3Q63HK5 1081 aa15.88■□□□□ 0.13
H3F3B-205ENST00000587171 KBTBD3Q8NAB2 608 aa15.88■□□□□ 0.13
H3F3B-205ENST00000587171 ACER1Q8TDN7 264 aa15.88■□□□□ 0.13
H3F3B-205ENST00000587171 PXYLP1Q8TE99 480 aa15.88■□□□□ 0.13
H3F3B-205ENST00000587171 FEZ1Q99689 392 aa15.88■□□□□ 0.13
H3F3B-205ENST00000587171 SWAP70Q9UH65 585 aa15.88■□□□□ 0.13
H3F3B-205ENST00000587171 UBXN2AP68543 259 aa15.87■□□□□ 0.13
H3F3B-205ENST00000587171 SEPT2Q15019 361 aa15.87■□□□□ 0.13
H3F3B-205ENST00000587171 ZYXQ15942 572 aaKnown RBP15.87■□□□□ 0.13
H3F3B-205ENST00000587171 SLC44A5Q8NCS7 719 aa15.87■□□□□ 0.13
H3F3B-205ENST00000587171 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms