RNA–Protein interactions for RNA: ENST00000586275.1

PDE4A-205, Transcript of phosphodiesterase 4A, humanhuman

TSL 3

Gene PDE4A, Length 695 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-205ENST00000586275 SHROOM1Q2M3G4 852 aaPredicted RBP25.55■■□□□ 1.68
PDE4A-205ENST00000586275 TTC6Q86TZ1 520 aa25.55■■□□□ 1.68
PDE4A-205ENST00000586275 ASCC2Q9H1I8 757 aaPredicted RBP25.55■■□□□ 1.68
PDE4A-205ENST00000586275 EHD4Q9H223 541 aa25.55■■□□□ 1.68
PDE4A-205ENST00000586275 TMOD4Q9NZQ9 345 aa25.55■■□□□ 1.68
PDE4A-205ENST00000586275 KIAA0100Q14667 2235 aaKnown RBP25.55■■□□□ 1.68
PDE4A-205ENST00000586275 RBBP6Q7Z6E9 1792 aaKnown RBP25.54■■□□□ 1.68
PDE4A-205ENST00000586275 BRCA2P51587 3418 aa25.54■■□□□ 1.68
PDE4A-205ENST00000586275 C19orf81C9J6K1 198 aa25.54■■□□□ 1.68
PDE4A-205ENST00000586275 MTFR1Q15390 333 aa25.54■■□□□ 1.68
PDE4A-205ENST00000586275 TATDN1Q6P1N9 297 aa25.54■■□□□ 1.68
PDE4A-205ENST00000586275 BIN2Q9UBW5 565 aaPredicted RBP25.54■■□□□ 1.68
PDE4A-205ENST00000586275 SERPINB13Q9UIV8 391 aa25.54■■□□□ 1.68
PDE4A-205ENST00000586275 SIPA1L1O43166 1804 aa25.53■■□□□ 1.68
PDE4A-205ENST00000586275 USP17L10C9JJH3 530 aa25.53■■□□□ 1.68
PDE4A-205ENST00000586275 FLT3LGP49771 235 aa25.53■■□□□ 1.68
PDE4A-205ENST00000586275 SLAIN1Q8ND83 568 aa25.53■■□□□ 1.68
PDE4A-205ENST00000586275 MYO5AQ9Y4I1 1855 aaKnown RBP25.52■■□□□ 1.68
PDE4A-205ENST00000586275 CRNKL1Q9BZJ0 848 aaKnown RBP25.52■■□□□ 1.68
PDE4A-205ENST00000586275 PTPRFP10586 1907 aa25.52■■□□□ 1.68
PDE4A-205ENST00000586275 ZNF532Q9HCE3 1301 aa25.52■■□□□ 1.68
PDE4A-205ENST00000586275 ADCY3O60266 1144 aa25.51■■□□□ 1.67
PDE4A-205ENST00000586275 GH2P01242 217 aa25.51■■□□□ 1.67
PDE4A-205ENST00000586275 ATP5JP18859 108 aa25.51■■□□□ 1.67
PDE4A-205ENST00000586275 HOXA7P31268 230 aaPredicted RBP25.51■■□□□ 1.67
PDE4A-205ENST00000586275 UBXN2AP68543 259 aa25.51■■□□□ 1.67
PDE4A-205ENST00000586275 COA7Q96BR5 231 aa25.51■■□□□ 1.67
PDE4A-205ENST00000586275 PAG1Q9NWQ8 432 aa25.51■■□□□ 1.67
PDE4A-205ENST00000586275 MKI67P46013 3256 aaKnown RBP25.5■■□□□ 1.67
PDE4A-205ENST00000586275 TCRBV5S4A2TA0A5A2 114 aa25.5■■□□□ 1.67
PDE4A-205ENST00000586275 CCL5P13501 91 aa25.5■■□□□ 1.67
PDE4A-205ENST00000586275 IRX3P78415 501 aaPredicted RBP25.5■■□□□ 1.67
PDE4A-205ENST00000586275 IRF5Q13568 498 aa25.5■■□□□ 1.67
PDE4A-205ENST00000586275 EDC3Q96F86 508 aaKnown RBP25.5■■□□□ 1.67
PDE4A-205ENST00000586275 LRRCC1Q9C099 1032 aa25.5■■□□□ 1.67
PDE4A-205ENST00000586275 BOLA2Q9H3K6 86 aa25.5■■□□□ 1.67
PDE4A-205ENST00000586275 FOCADQ5VW36 1801 aa25.49■■□□□ 1.67
PDE4A-205ENST00000586275 POLR3DP05423 398 aaPredicted RBP25.49■■□□□ 1.67
PDE4A-205ENST00000586275 PLCD1P51178 756 aa25.49■■□□□ 1.67
PDE4A-205ENST00000586275 NKX2-3Q8TAU0 364 aa25.49■■□□□ 1.67
PDE4A-205ENST00000586275 PXYLP1Q8TE99 480 aa25.49■■□□□ 1.67
PDE4A-205ENST00000586275 LOC285556D6RIA3 1793 aa25.49■■□□□ 1.67
PDE4A-205ENST00000586275 SLC34A2O95436 690 aa25.48■■□□□ 1.67
PDE4A-205ENST00000586275 CERKLQ49MI3 558 aaPredicted RBP25.48■■□□□ 1.67
PDE4A-205ENST00000586275 P2RX7Q99572 595 aaKnown RBP25.48■■□□□ 1.67
PDE4A-205ENST00000586275 HAUS7Q99871 368 aa25.48■■□□□ 1.67
PDE4A-205ENST00000586275 RNF208Q9H0X6 261 aa25.48■■□□□ 1.67
PDE4A-205ENST00000586275 MORF4L1Q9UBU8 362 aa25.48■■□□□ 1.67
PDE4A-205ENST00000586275 CDK5RAP2Q96SN8 1893 aa25.48■■□□□ 1.67
PDE4A-205ENST00000586275 ATAD5Q96QE3 1844 aa25.47■■□□□ 1.67
PDE4A-205ENST00000586275 GJB1P08034 283 aa25.47■■□□□ 1.67
PDE4A-205ENST00000586275 ELNP15502 786 aa25.47■■□□□ 1.67
PDE4A-205ENST00000586275 ABCB5Q2M3G0 1257 aa25.47■■□□□ 1.67
PDE4A-205ENST00000586275 USP17L2Q6R6M4 530 aa25.47■■□□□ 1.67
PDE4A-205ENST00000586275 EMILIN3Q9NT22 766 aa25.47■■□□□ 1.67
PDE4A-205ENST00000586275 MCM9Q9NXL9 1143 aa25.47■■□□□ 1.67
PDE4A-205ENST00000586275 SHMT1P34896 483 aa25.46■■□□□ 1.67
PDE4A-205ENST00000586275 GJA8P48165 433 aa25.46■■□□□ 1.67
PDE4A-205ENST00000586275 LCORLQ8N3X6 602 aa25.46■■□□□ 1.67
PDE4A-205ENST00000586275 SHISA4Q96DD7 197 aa25.46■■□□□ 1.67
PDE4A-205ENST00000586275 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.46■■□□□ 1.67
PDE4A-205ENST00000586275 CABP5Q9NP86 173 aa25.46■■□□□ 1.67
PDE4A-205ENST00000586275 ADD2P35612 726 aa25.45■■□□□ 1.66
PDE4A-205ENST00000586275 HERVK_113P62684 666 aa25.45■■□□□ 1.66
PDE4A-205ENST00000586275 RAB3GAP1Q15042 981 aa25.45■■□□□ 1.66
PDE4A-205ENST00000586275 UNC93B1Q9H1C4 597 aa25.45■■□□□ 1.66
PDE4A-205ENST00000586275 DCP1AQ9NPI6 582 aaPredicted RBP25.45■■□□□ 1.66
PDE4A-205ENST00000586275 TAOK2Q9UL54 1235 aa25.45■■□□□ 1.66
PDE4A-205ENST00000586275 SMARCA5O60264 1052 aaPredicted RBP25.44■■□□□ 1.66
PDE4A-205ENST00000586275 INHAP05111 366 aa25.44■■□□□ 1.66
PDE4A-205ENST00000586275 GABPAQ06546 454 aa25.44■■□□□ 1.66
PDE4A-205ENST00000586275 SDR42E1Q8WUS8 393 aa25.44■■□□□ 1.66
PDE4A-205ENST00000586275 FEZ1Q99689 392 aa25.44■■□□□ 1.66
PDE4A-205ENST00000586275 ARMT1Q9H993 441 aa25.44■■□□□ 1.66
PDE4A-205ENST00000586275 USP14P54578 494 aa25.43■■□□□ 1.66
PDE4A-205ENST00000586275 GPRC5AQ8NFJ5 357 aa25.43■■□□□ 1.66
PDE4A-205ENST00000586275 C12orf42Q96LP6 360 aa25.43■■□□□ 1.66
PDE4A-205ENST00000586275 KIAA1683Q9H0B3 1180 aa25.43■■□□□ 1.66
PDE4A-205ENST00000586275 GJD2Q9UKL4 321 aa25.43■■□□□ 1.66
PDE4A-205ENST00000586275 ZYXQ15942 572 aaKnown RBP25.42■■□□□ 1.66
PDE4A-205ENST00000586275 SLFNL1Q499Z3 407 aa25.42■■□□□ 1.66
PDE4A-205ENST00000586275 U2AF1L4Q8WU68 220 aaKnown RBP25.42■■□□□ 1.66
PDE4A-205ENST00000586275 GTF3C2Q8WUA4 911 aaPredicted RBP25.42■■□□□ 1.66
PDE4A-205ENST00000586275 DCTPP1Q9H773 170 aa25.42■■□□□ 1.66
PDE4A-205ENST00000586275 TXNRD2Q9NNW7 524 aa25.42■■□□□ 1.66
PDE4A-205ENST00000586275 RBPJLQ9UBG7 517 aa25.42■■□□□ 1.66
PDE4A-205ENST00000586275 MBD4O95243 580 aa25.41■■□□□ 1.66
PDE4A-205ENST00000586275 EVX2Q03828 476 aa25.41■■□□□ 1.66
PDE4A-205ENST00000586275 UBE3CQ15386 1083 aa25.41■■□□□ 1.66
PDE4A-205ENST00000586275 ACER1Q8TDN7 264 aa25.41■■□□□ 1.66
PDE4A-205ENST00000586275 GCC1Q96CN9 775 aa25.41■■□□□ 1.66
PDE4A-205ENST00000586275 ATP8A2Q9NTI2 1148 aa25.41■■□□□ 1.66
PDE4A-205ENST00000586275 MGAMO43451 1857 aa25.4■■□□□ 1.66
PDE4A-205ENST00000586275 USP17L15C9J2P7 530 aa25.4■■□□□ 1.66
PDE4A-205ENST00000586275 USP17L13C9JLJ4 530 aa25.4■■□□□ 1.66
PDE4A-205ENST00000586275 USP17L11C9JVI0 530 aa25.4■■□□□ 1.66
PDE4A-205ENST00000586275 USP17L18D6R9N7 530 aa25.4■■□□□ 1.66
PDE4A-205ENST00000586275 USP17L22D6RA61 530 aa25.4■■□□□ 1.66
PDE4A-205ENST00000586275 USP17L17D6RBQ6 530 aa25.4■■□□□ 1.66
PDE4A-205ENST00000586275 USP17L19D6RCP7 530 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms