RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 BACE1P56817 501 aa20.7■□□□□ 0.9
MBD3-204ENST00000585967 IRF5Q13568 498 aa20.7■□□□□ 0.9
MBD3-204ENST00000585967 MTMR2Q13614 643 aa20.7■□□□□ 0.9
MBD3-204ENST00000585967 TTC6Q86TZ1 520 aa20.7■□□□□ 0.9
MBD3-204ENST00000585967 METTL16Q86W50 562 aaKnown RBP20.7■□□□□ 0.9
MBD3-204ENST00000585967 RHPN1Q8TCX5 695 aa20.7■□□□□ 0.9
MBD3-204ENST00000585967 GTF3C2Q8WUA4 911 aaPredicted RBP20.7■□□□□ 0.9
MBD3-204ENST00000585967 RNF208Q9H0X6 261 aa20.7■□□□□ 0.9
MBD3-204ENST00000585967 USP17L10C9JJH3 530 aa20.69■□□□□ 0.9
MBD3-204ENST00000585967 GJB1P08034 283 aa20.69■□□□□ 0.9
MBD3-204ENST00000585967 CCL5P13501 91 aa20.69■□□□□ 0.9
MBD3-204ENST00000585967 FLT3LGP49771 235 aa20.69■□□□□ 0.9
MBD3-204ENST00000585967 MIGA1Q8NAN2 632 aa20.69■□□□□ 0.9
MBD3-204ENST00000585967 EHD4Q9H223 541 aa20.69■□□□□ 0.9
MBD3-204ENST00000585967 SAP30BPQ9UHR5 308 aaKnown RBP20.69■□□□□ 0.9
MBD3-204ENST00000585967 SERPINB13Q9UIV8 391 aa20.69■□□□□ 0.9
MBD3-204ENST00000585967 ZBTB21Q9ULJ3 1066 aa20.69■□□□□ 0.9
MBD3-204ENST00000585967 RAB11FIP3O75154 756 aa20.68■□□□□ 0.9
MBD3-204ENST00000585967 MTFR1Q15390 333 aa20.68■□□□□ 0.9
MBD3-204ENST00000585967 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.68■□□□□ 0.9
MBD3-204ENST00000585967 ASCC2Q9H1I8 757 aaPredicted RBP20.68■□□□□ 0.9
MBD3-204ENST00000585967 IL1RAPL2Q9NP60 686 aa20.68■□□□□ 0.9
MBD3-204ENST00000585967 TAOK2Q9UL54 1235 aa20.68■□□□□ 0.9
MBD3-204ENST00000585967 GJA8P48165 433 aa20.67■□□□□ 0.9
MBD3-204ENST00000585967 DYNLL1P63167 89 aaKnown RBP20.67■□□□□ 0.9
MBD3-204ENST00000585967 FEZ1Q99689 392 aa20.67■□□□□ 0.9
MBD3-204ENST00000585967 HTATIP2Q9BUP3 242 aa20.67■□□□□ 0.9
MBD3-204ENST00000585967 CRNKL1Q9BZJ0 848 aaKnown RBP20.67■□□□□ 0.9
MBD3-204ENST00000585967 RCAN3Q9UKA8 241 aa20.67■□□□□ 0.9
MBD3-204ENST00000585967 MAGEB6P1A0A0J9YX57 407 aa20.66■□□□□ 0.9
MBD3-204ENST00000585967 GDF11O95390 407 aa20.66■□□□□ 0.9
MBD3-204ENST00000585967 CCAR1Q8IX12 1150 aaKnown RBP20.66■□□□□ 0.9
MBD3-204ENST00000585967 DNAJC18Q9H819 358 aa20.66■□□□□ 0.9
MBD3-204ENST00000585967 CABP5Q9NP86 173 aa20.66■□□□□ 0.9
MBD3-204ENST00000585967 GABRQQ9UN88 632 aa20.66■□□□□ 0.9
MBD3-204ENST00000585967 COG6Q9Y2V7 657 aa20.66■□□□□ 0.9
MBD3-204ENST00000585967 BAZ2AQ9UIF9 1905 aaKnown RBP20.66■□□□□ 0.9
MBD3-204ENST00000585967 APBB1O00213 710 aa20.65■□□□□ 0.9
MBD3-204ENST00000585967 INHAP05111 366 aa20.65■□□□□ 0.9
MBD3-204ENST00000585967 HOXA7P31268 230 aaPredicted RBP20.65■□□□□ 0.9
MBD3-204ENST00000585967 USP14P54578 494 aa20.65■□□□□ 0.9
MBD3-204ENST00000585967 USP17L2Q6R6M4 530 aa20.65■□□□□ 0.9
MBD3-204ENST00000585967 ZBTB40Q9NUA8 1239 aa20.65■□□□□ 0.9
MBD3-204ENST00000585967 RRP1BQ14684 758 aaKnown RBP20.64■□□□□ 0.89
MBD3-204ENST00000585967 SLC9C2Q5TAH2 1124 aa20.64■□□□□ 0.89
MBD3-204ENST00000585967 DNAJC2Q99543 621 aaKnown RBP20.64■□□□□ 0.89
MBD3-204ENST00000585967 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.64■□□□□ 0.893e-6■■■■■ 28.4
MBD3-204ENST00000585967 ANTXR1Q9H6X2 564 aa20.64■□□□□ 0.89
MBD3-204ENST00000585967 PCDH10Q9P2E7 1040 aa20.64■□□□□ 0.89
MBD3-204ENST00000585967 MORF4L1Q9UBU8 362 aa20.64■□□□□ 0.89
MBD3-204ENST00000585967 PLXNB2O15031 1838 aa20.64■□□□□ 0.89
MBD3-204ENST00000585967 POLR3DP05423 398 aaPredicted RBP20.63■□□□□ 0.89
MBD3-204ENST00000585967 PDE3AQ14432 1141 aa20.63■□□□□ 0.89
MBD3-204ENST00000585967 CERKLQ49MI3 558 aaPredicted RBP20.63■□□□□ 0.89
MBD3-204ENST00000585967 AMOTL1Q8IY63 956 aa20.63■□□□□ 0.89
MBD3-204ENST00000585967 U2AF1L4Q8WU68 220 aaKnown RBP20.63■□□□□ 0.89
MBD3-204ENST00000585967 SOCS4Q8WXH5 440 aa20.63■□□□□ 0.89
MBD3-204ENST00000585967 CWC22Q9HCG8 908 aaKnown RBP20.63■□□□□ 0.89
MBD3-204ENST00000585967 NDUFB9Q9Y6M9 179 aa20.63■□□□□ 0.89
MBD3-204ENST00000585967 GOLIM4O00461 696 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 GH2P01242 217 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 HMGCRP04035 888 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 ELNP15502 786 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 PDE6AP16499 860 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 HERVK_113P62684 666 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 TATDN1Q6P1N9 297 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 GPRC5AQ8NFJ5 357 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 SHISA4Q96DD7 197 aa20.62■□□□□ 0.89
MBD3-204ENST00000585967 FARP2O94887 1054 aaPredicted RBP20.61■□□□□ 0.89
MBD3-204ENST00000585967 SGPL1O95470 568 aa20.61■□□□□ 0.89
MBD3-204ENST00000585967 MAPK4P31152 587 aa20.61■□□□□ 0.89
MBD3-204ENST00000585967 RAB3GAP1Q15042 981 aa20.61■□□□□ 0.89
MBD3-204ENST00000585967 ABCB5Q2M3G0 1257 aa20.61■□□□□ 0.89
MBD3-204ENST00000585967 TRMT44Q8IYL2 757 aaKnown RBP20.61■□□□□ 0.89
MBD3-204ENST00000585967 DPF3Q92784 378 aa20.61■□□□□ 0.89
MBD3-204ENST00000585967 DDRGK1Q96HY6 314 aa20.61■□□□□ 0.89
MBD3-204ENST00000585967 RIOK1Q9BRS2 568 aaKnown RBP20.61■□□□□ 0.89
MBD3-204ENST00000585967 UNC93B1Q9H1C4 597 aa20.61■□□□□ 0.89
MBD3-204ENST00000585967 CCNA1P78396 465 aa20.6■□□□□ 0.89
MBD3-204ENST00000585967 C12orf42Q96LP6 360 aa20.6■□□□□ 0.89
MBD3-204ENST00000585967 BCL11AQ9H165 835 aa20.6■□□□□ 0.89
MBD3-204ENST00000585967 PAG1Q9NWQ8 432 aa20.6■□□□□ 0.89
MBD3-204ENST00000585967 MCM9Q9NXL9 1143 aa20.6■□□□□ 0.89
MBD3-204ENST00000585967 NR2E3Q9Y5X4 410 aa20.6■□□□□ 0.89
MBD3-204ENST00000585967 ZNF532Q9HCE3 1301 aa20.59■□□□□ 0.89
MBD3-204ENST00000585967 GLRX3O76003 335 aaKnown RBP20.59■□□□□ 0.89
MBD3-204ENST00000585967 TFRCP02786 760 aaKnown RBP20.59■□□□□ 0.89
MBD3-204ENST00000585967 ZSCAN25Q6NSZ9 544 aa20.59■□□□□ 0.89
MBD3-204ENST00000585967 NUDT12Q9BQG2 462 aa20.59■□□□□ 0.89
MBD3-204ENST00000585967 TRIOBPQ9H2D6 2365 aa20.59■□□□□ 0.89
MBD3-204ENST00000585967 USP17L15C9J2P7 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 USP17L13C9JLJ4 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 USP17L11C9JVI0 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 USP17L18D6R9N7 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 USP17L22D6RA61 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 USP17L17D6RBQ6 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 USP17L19D6RCP7 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 USP17L20D6RJB6 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 USP17L24Q0WX57 530 aa20.58■□□□□ 0.89
MBD3-204ENST00000585967 HABP4Q5JVS0 413 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms