RNA–Protein interactions for RNA: ENST00000585961.1

CLPTM1-204, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 4

Gene CLPTM1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-204ENST00000585961 DOCK3Q8IZD9 2030 aa24.61■■□□□ 1.53
CLPTM1-204ENST00000585961 IDH1O75874 414 aaKnown RBP24.6■■□□□ 1.53
CLPTM1-204ENST00000585961 MIGA1Q8NAN2 632 aa24.6■■□□□ 1.53
CLPTM1-204ENST00000585961 DIS3LQ8TF46 1054 aaKnown RBP24.6■■□□□ 1.53
CLPTM1-204ENST00000585961 EAF2Q96CJ1 260 aaPredicted RBP24.6■■□□□ 1.53
CLPTM1-204ENST00000585961 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.6■■□□□ 1.53
CLPTM1-204ENST00000585961 TRIOBPQ9H2D6 2365 aa24.59■■□□□ 1.53
CLPTM1-204ENST00000585961 HNRNPUQ00839 825 aaKnown RBP eCLIP24.59■■□□□ 1.53
CLPTM1-204ENST00000585961 Q3C1V9 767 aa24.59■■□□□ 1.53
CLPTM1-204ENST00000585961 CRISPLD2Q9H0B8 497 aa24.59■■□□□ 1.53
CLPTM1-204ENST00000585961 TXNRD2Q9NNW7 524 aa24.59■■□□□ 1.53
CLPTM1-204ENST00000585961 NOP58Q9Y2X3 529 aaKnown RBP24.59■■□□□ 1.53
CLPTM1-204ENST00000585961 USP17L10C9JJH3 530 aa24.58■■□□□ 1.53
CLPTM1-204ENST00000585961 METTL16Q86W50 562 aaKnown RBP24.58■■□□□ 1.53
CLPTM1-204ENST00000585961 STAP2Q9UGK3 403 aa24.58■■□□□ 1.53
CLPTM1-204ENST00000585961 PTPRFP10586 1907 aa24.58■■□□□ 1.53
CLPTM1-204ENST00000585961 COL2A1P02458 1487 aaPredicted RBP24.58■■□□□ 1.52
CLPTM1-204ENST00000585961 C19orf81C9J6K1 198 aa24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 HOXA7P31268 230 aaPredicted RBP24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 MAGEB6Q8N7X4 407 aa24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 GPRC5AQ8NFJ5 357 aa24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 ZNF512BQ96KM6 892 aaPredicted RBP24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 BCL11AQ9H165 835 aa24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 ANTXR1Q9H6X2 564 aa24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 HMX1Q9NP08 348 aaPredicted RBP24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 RBPJLQ9UBG7 517 aa24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 MORF4L1Q9UBU8 362 aa24.57■■□□□ 1.52
CLPTM1-204ENST00000585961 HMGCRP04035 888 aa24.56■■□□□ 1.52
CLPTM1-204ENST00000585961 HLA-DOAP06340 250 aa24.56■■□□□ 1.52
CLPTM1-204ENST00000585961 USP5P45974 858 aa24.56■■□□□ 1.52
CLPTM1-204ENST00000585961 HERVK_113P62684 666 aa24.56■■□□□ 1.52
CLPTM1-204ENST00000585961 ZYXQ15942 572 aaKnown RBP24.56■■□□□ 1.52
CLPTM1-204ENST00000585961 NECAB2Q7Z6G3 386 aa24.56■■□□□ 1.52
CLPTM1-204ENST00000585961 EMILIN3Q9NT22 766 aa24.56■■□□□ 1.52
CLPTM1-204ENST00000585961 ZBTB21Q9ULJ3 1066 aa24.56■■□□□ 1.52
CLPTM1-204ENST00000585961 GH2P01242 217 aa24.55■■□□□ 1.52
CLPTM1-204ENST00000585961 PAGR1Q9BTK6 254 aa24.55■■□□□ 1.52
CLPTM1-204ENST00000585961 RPTORQ8N122 1335 aa24.55■■□□□ 1.52
CLPTM1-204ENST00000585961 SZT2Q5T011 3432 aa24.54■■□□□ 1.52
CLPTM1-204ENST00000585961 CCAR1Q8IX12 1150 aaKnown RBP24.54■■□□□ 1.52
CLPTM1-204ENST00000585961 TRIB2Q92519 343 aa24.54■■□□□ 1.52
CLPTM1-204ENST00000585961 PRO3102Q9H379 93 aa24.54■■□□□ 1.52
CLPTM1-204ENST00000585961 EXOC6BQ9Y2D4 811 aa24.54■■□□□ 1.52
CLPTM1-204ENST00000585961 RANBP2P49792 3224 aaKnown RBP24.54■■□□□ 1.52
CLPTM1-204ENST00000585961 USP17L2Q6R6M4 530 aa24.53■■□□□ 1.52
CLPTM1-204ENST00000585961 POTEEQ6S8J3 1075 aa24.53■■□□□ 1.52
CLPTM1-204ENST00000585961 MIER1Q8N108 512 aa24.53■■□□□ 1.52
CLPTM1-204ENST00000585961 NUDT12Q9BQG2 462 aa24.53■■□□□ 1.52
CLPTM1-204ENST00000585961 AACSQ86V21 672 aa24.52■■□□□ 1.52
CLPTM1-204ENST00000585961 PANK1Q8TE04 598 aa24.52■■□□□ 1.52
CLPTM1-204ENST00000585961 PORCNQ9H237 461 aa24.52■■□□□ 1.52
CLPTM1-204ENST00000585961 RAB3GAP1Q15042 981 aa24.51■■□□□ 1.51
CLPTM1-204ENST00000585961 CEP85Q6P2H3 762 aa24.51■■□□□ 1.51
CLPTM1-204ENST00000585961 C7orf61Q8IZ16 206 aa24.51■■□□□ 1.51
CLPTM1-204ENST00000585961 IL1RAPL2Q9NP60 686 aa24.51■■□□□ 1.51
CLPTM1-204ENST00000585961 GINM1Q9NU53 330 aa24.51■■□□□ 1.51
CLPTM1-204ENST00000585961 ZMYND8Q9ULU4 1186 aaPredicted RBP24.51■■□□□ 1.51
CLPTM1-204ENST00000585961 APBB1O00213 710 aa24.5■■□□□ 1.51
CLPTM1-204ENST00000585961 CAPN2P17655 700 aa24.5■■□□□ 1.51
CLPTM1-204ENST00000585961 ERVK-9P63128 1117 aa24.5■■□□□ 1.51
CLPTM1-204ENST00000585961 ERVK-24P63145 666 aa24.5■■□□□ 1.51
CLPTM1-204ENST00000585961 ACER1Q8TDN7 264 aa24.5■■□□□ 1.51
CLPTM1-204ENST00000585961 PRKAR2AP13861 404 aaKnown RBP24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 MNX1P50219 401 aaPredicted RBP24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 PLCD1P51178 756 aa24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 MAP3K12Q12852 859 aa24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 CCL14Q16627 93 aa24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 CERKLQ49MI3 558 aaPredicted RBP24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 TATDN1Q6P1N9 297 aa24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 FEZ1Q99689 392 aa24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 NBPF3Q9H094 633 aa24.49■■□□□ 1.51
CLPTM1-204ENST00000585961 MAPK4P31152 587 aa24.48■■□□□ 1.51
CLPTM1-204ENST00000585961 CACNB2Q08289 660 aaPredicted RBP24.48■■□□□ 1.51
CLPTM1-204ENST00000585961 PDE3AQ14432 1141 aa24.48■■□□□ 1.51
CLPTM1-204ENST00000585961 ATAD5Q96QE3 1844 aa24.48■■□□□ 1.51
CLPTM1-204ENST00000585961 CWC22Q9HCG8 908 aaKnown RBP24.48■■□□□ 1.51
CLPTM1-204ENST00000585961 SERPINB13Q9UIV8 391 aa24.48■■□□□ 1.51
CLPTM1-204ENST00000585961 MYO5AQ9Y4I1 1855 aaKnown RBP24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 POLR3DP05423 398 aaPredicted RBP24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 SYN1P17600 705 aa24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 ABCB5Q2M3G0 1257 aa24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 GPR142Q7Z601 462 aa24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 PLEKHH3Q7Z736 793 aa24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 TTC6Q86TZ1 520 aa24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 ANKLE1Q8NAG6 615 aa24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 SIPA1L1O43166 1804 aa24.47■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L15C9J2P7 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L13C9JLJ4 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L11C9JVI0 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L18D6R9N7 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L22D6RA61 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L17D6RBQ6 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L19D6RCP7 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L20D6RJB6 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 SOX1O00570 391 aaPredicted RBP24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 XRCC5P13010 732 aaKnown RBP24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 CCND3P30281 292 aaPredicted RBP24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 USP17L24Q0WX57 530 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 WDR78Q5VTH9 848 aa24.46■■□□□ 1.51
CLPTM1-204ENST00000585961 C11orf49Q9H6J7 331 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms