RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 ZMYM6O95789 1325 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 C19orf81C9J6K1 198 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 IGF2BP3O00425 579 aaKnown RBP eCLIP16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 NT5C2P49902 561 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 LBX1P52954 281 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 CERKLQ49MI3 558 aaPredicted RBP16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 MCMDC2Q4G0Z9 681 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 ZNF280CQ8ND82 737 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 RILPL2Q969X0 211 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 ZFYVE28Q9HCC9 887 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 PPP4R2Q9NY27 417 aa16.52■□□□□ 0.24
PRKCSH-202ENST00000585540 BAZ2AQ9UIF9 1905 aaKnown RBP16.52■□□□□ 0.23
PRKCSH-202ENST00000585540 GSG1L2A8MUP6 293 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 USP17L12C9JPN9 530 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 USP17L21D6R901 530 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 SLC3A2P08195 630 aaKnown RBP16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 TDO2P48775 406 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 PLCD1P51178 756 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 PABPC4Q13310 644 aaKnown RBP eCLIP16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 SH3D19Q5HYK7 790 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 TTC22Q5TAA0 569 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 C16orf86Q6ZW13 317 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 SKAP1Q86WV1 359 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 CNKSR2Q8WXI2 1034 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 LOC285556D6RIA3 1793 aa16.51■□□□□ 0.23
PRKCSH-202ENST00000585540 RAD50Q92878 1312 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 FAM196BA6NMK8 535 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 M0R2C6 588 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 PRKAB2O43741 272 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 CHGBP05060 677 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 SHMT1P34896 483 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 USP14P54578 494 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 ARHGEF6Q15052 776 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 TAF1CQ15572 869 aaPredicted RBP16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 ABCB5Q2M3G0 1257 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 SLFNL1Q499Z3 407 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 CTR9Q6PD62 1173 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 TMEM179Q6ZVK1 233 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 PARK7Q99497 189 aaKnown RBP16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 NAPBQ9H115 298 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 DIAPH3Q9NSV4 1193 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 PNMA3Q9UL41 463 aa16.5■□□□□ 0.23
PRKCSH-202ENST00000585540 SDSP20132 328 aa16.49■□□□□ 0.23
PRKCSH-202ENST00000585540 ALX1Q15699 326 aa16.49■□□□□ 0.23
PRKCSH-202ENST00000585540 PPP4R3BQ5MIZ7 849 aa16.49■□□□□ 0.23
PRKCSH-202ENST00000585540 IFNL3Q8IZI9 196 aa16.49■□□□□ 0.23
PRKCSH-202ENST00000585540 PTPN18Q99952 460 aa16.49■□□□□ 0.23
PRKCSH-202ENST00000585540 SH2D4AQ9H788 454 aa16.49■□□□□ 0.23
PRKCSH-202ENST00000585540 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.49■□□□□ 0.23
PRKCSH-202ENST00000585540 AGTPBP1Q9UPW5 1226 aa16.49■□□□□ 0.23
PRKCSH-202ENST00000585540 CCDC171Q6TFL3 1326 aa16.48■□□□□ 0.23
PRKCSH-202ENST00000585540 BTBD19C9JJ37 291 aa16.48■□□□□ 0.23
PRKCSH-202ENST00000585540 GPR25O00155 361 aa16.48■□□□□ 0.23
PRKCSH-202ENST00000585540 APPP05067 770 aa16.48■□□□□ 0.23
PRKCSH-202ENST00000585540 BACE1P56817 501 aa16.48■□□□□ 0.23
PRKCSH-202ENST00000585540 RUFY2Q8WXA3 655 aa16.48■□□□□ 0.23
PRKCSH-202ENST00000585540 TMOD4Q9NZQ9 345 aa16.48■□□□□ 0.23
PRKCSH-202ENST00000585540 TRIM75PA6NK02 468 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 TLR2O60603 784 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 FKTNO75072 461 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 GDF11O95390 407 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 GH2P01242 217 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 PCP11498 1178 aaKnown RBP16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 CDK8P49336 464 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 PDE4BQ07343 736 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 SPP2Q13103 211 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 FAM43AQ8N2R8 423 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 GTF3C2Q8WUA4 911 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 ERO1AQ96HE7 468 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 C12orf42Q96LP6 360 aa16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 EPB41L4AQ9HCS5 686 aaPredicted RBP16.47■□□□□ 0.23
PRKCSH-202ENST00000585540 A0A0D9SFI3 127 aa16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 PDHXO00330 501 aa16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 NMIQ13287 307 aaPredicted RBP16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 CRHR2Q13324 411 aa16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 MOGSQ13724 837 aa16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 RRP1BQ14684 758 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 PKN2Q16513 984 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 SLC4A8Q2Y0W8 1093 aa16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 USP17L2Q6R6M4 530 aa16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 SEC62Q99442 399 aaKnown RBP16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 KIAA1683Q9H0B3 1180 aa16.46■□□□□ 0.23
PRKCSH-202ENST00000585540 TBC1D8O95759 1140 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 SLURP2P0DP57 97 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 GSPT1P15170 499 aaKnown RBP16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 GADL1Q6ZQY3 521 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 ARHGEF10LQ9HCE6 1279 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 ANAPC4Q9UJX5 808 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 SYNPO2Q9UMS6 1093 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 PLIN4Q96Q06 1357 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 PCNTO95613 3336 aa16.45■□□□□ 0.22
PRKCSH-202ENST00000585540 MINDY4BA8MYZ0 360 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 GNRH1P01148 92 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 CYP2D6P10635 497 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 OSBPP22059 807 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 HOXA7P31268 230 aaPredicted RBP16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 PPARAQ07869 468 aa16.44■□□□□ 0.22
PRKCSH-202ENST00000585540 RAB3GAP1Q15042 981 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms