RNA–Protein interactions for RNA: ENST00000585409.2

LSM7-203, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM7, Length 512 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-203ENST00000585409 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.05■■■□□ 2.08
LSM7-203ENST00000585409 SNRKQ9NRH2 765 aa28.05■■■□□ 2.08
LSM7-203ENST00000585409 PNMA3Q9UL41 463 aa28.05■■■□□ 2.08
LSM7-203ENST00000585409 TTC41PQ6P2S7 1318 aa28.04■■■□□ 2.08
LSM7-203ENST00000585409 ERC2O15083 957 aa28.04■■■□□ 2.08
LSM7-203ENST00000585409 MAP4K4O95819 1239 aaPredicted RBP28.04■■■□□ 2.08
LSM7-203ENST00000585409 ERICH6BQ5W0A0 696 aa28.04■■■□□ 2.08
LSM7-203ENST00000585409 COA7Q96BR5 231 aa28.04■■■□□ 2.08
LSM7-203ENST00000585409 DEFB118Q96PH6 123 aa28.04■■■□□ 2.08
LSM7-203ENST00000585409 FAM196BA6NMK8 535 aa28.03■■■□□ 2.08
LSM7-203ENST00000585409 TFRCP02786 760 aaKnown RBP28.03■■■□□ 2.08
LSM7-203ENST00000585409 LDHCP07864 332 aa28.03■■■□□ 2.08
LSM7-203ENST00000585409 ZAP70P43403 619 aa28.03■■■□□ 2.08
LSM7-203ENST00000585409 B4GALNT3Q6L9W6 998 aa28.03■■■□□ 2.08
LSM7-203ENST00000585409 TMED8Q6PL24 325 aaPredicted RBP28.03■■■□□ 2.08
LSM7-203ENST00000585409 RAI14Q9P0K7 980 aa28.03■■■□□ 2.08
LSM7-203ENST00000585409 A0A1W2PPC1 479 aa28.02■■■□□ 2.08
LSM7-203ENST00000585409 PI16Q6UXB8 463 aa28.02■■■□□ 2.08
LSM7-203ENST00000585409 NSUN4Q96CB9 384 aaKnown RBP28.02■■■□□ 2.08
LSM7-203ENST00000585409 PLXNB2O15031 1838 aa28.02■■■□□ 2.08
LSM7-203ENST00000585409 SIPA1L1O43166 1804 aa28.02■■■□□ 2.08
LSM7-203ENST00000585409 EVI5O60447 810 aa28.01■■■□□ 2.07
LSM7-203ENST00000585409 SPP2Q13103 211 aa28.01■■■□□ 2.07
LSM7-203ENST00000585409 CHD1LQ86WJ1 897 aa28.01■■■□□ 2.07
LSM7-203ENST00000585409 TBC1D2Q9BYX2 928 aa28.01■■■□□ 2.07
LSM7-203ENST00000585409 MX1P20591 662 aa28■■■□□ 2.07
LSM7-203ENST00000585409 GCLCP48506 637 aaPredicted RBP28■■■□□ 2.07
LSM7-203ENST00000585409 NUCB1Q02818 461 aa28■■■□□ 2.07
LSM7-203ENST00000585409 ZNF280CQ8ND82 737 aa28■■■□□ 2.07
LSM7-203ENST00000585409 DNAJC2Q99543 621 aaKnown RBP28■■■□□ 2.07
LSM7-203ENST00000585409 CYP2E1P05181 493 aaPredicted RBP27.99■■■□□ 2.07
LSM7-203ENST00000585409 CAP2P40123 477 aa27.99■■■□□ 2.07
LSM7-203ENST00000585409 MAP3K12Q12852 859 aa27.99■■■□□ 2.07
LSM7-203ENST00000585409 LNPKQ9C0E8 428 aa27.99■■■□□ 2.07
LSM7-203ENST00000585409 BOLA2Q9H3K6 86 aa27.99■■■□□ 2.07
LSM7-203ENST00000585409 TAOK2Q9UL54 1235 aa27.99■■■□□ 2.07
LSM7-203ENST00000585409 CDK5RAP2Q96SN8 1893 aa27.98■■■□□ 2.07
LSM7-203ENST00000585409 GLRX3O76003 335 aaKnown RBP27.98■■■□□ 2.07
LSM7-203ENST00000585409 RRP1BQ14684 758 aaKnown RBP27.98■■■□□ 2.07
LSM7-203ENST00000585409 SH3D19Q5HYK7 790 aa27.98■■■□□ 2.07
LSM7-203ENST00000585409 TBC1D9Q6ZT07 1266 aa27.98■■■□□ 2.07
LSM7-203ENST00000585409 HAUS7Q99871 368 aa27.98■■■□□ 2.07
LSM7-203ENST00000585409 NOL10Q9BSC4 688 aaKnown RBP27.98■■■□□ 2.07
LSM7-203ENST00000585409 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.98■■■□□ 2.07
LSM7-203ENST00000585409 HMGCS2P54868 508 aa27.97■■■□□ 2.07
LSM7-203ENST00000585409 PAWRQ96IZ0 340 aaKnown RBP27.97■■■□□ 2.07
LSM7-203ENST00000585409 PAG1Q9NWQ8 432 aa27.97■■■□□ 2.07
LSM7-203ENST00000585409 GJD2Q9UKL4 321 aa27.97■■■□□ 2.07
LSM7-203ENST00000585409 FOCADQ5VW36 1801 aa27.97■■■□□ 2.07
LSM7-203ENST00000585409 MAST2Q6P0Q8 1798 aa27.96■■■□□ 2.07
LSM7-203ENST00000585409 IDH1O75874 414 aaKnown RBP27.96■■■□□ 2.07
LSM7-203ENST00000585409 HMGCRP04035 888 aa27.96■■■□□ 2.07
LSM7-203ENST00000585409 PABPC4Q13310 644 aaKnown RBP eCLIP27.96■■■□□ 2.078e-9■■■■□ 23
LSM7-203ENST00000585409 CCDC136Q96JN2 1154 aa27.96■■■□□ 2.07
LSM7-203ENST00000585409 ASCC2Q9H1I8 757 aaPredicted RBP27.96■■■□□ 2.07
LSM7-203ENST00000585409 HERC5Q9UII4 1024 aaKnown RBP27.96■■■□□ 2.07
LSM7-203ENST00000585409 LAMA3Q16787 3333 aa27.95■■■□□ 2.06
LSM7-203ENST00000585409 USP17L5A8MUK1 530 aa27.95■■■□□ 2.06
LSM7-203ENST00000585409 GOLIM4O00461 696 aa27.95■■■□□ 2.06
LSM7-203ENST00000585409 NAA16Q6N069 864 aaPredicted RBP27.95■■■□□ 2.06
LSM7-203ENST00000585409 CENPQQ7L2Z9 268 aaPredicted RBP27.95■■■□□ 2.06
LSM7-203ENST00000585409 ANKLE1Q8NAG6 615 aa27.95■■■□□ 2.06
LSM7-203ENST00000585409 DIS3LQ8TF46 1054 aaKnown RBP27.95■■■□□ 2.06
LSM7-203ENST00000585409 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.95■■■□□ 2.063e-9■□□□□ 8.1
LSM7-203ENST00000585409 LRRFIP1Q32MZ4 808 aaKnown RBP27.94■■■□□ 2.06
LSM7-203ENST00000585409 NECAB2Q7Z6G3 386 aa27.94■■■□□ 2.06
LSM7-203ENST00000585409 PIH1D3Q9NQM4 214 aaKnown RBP27.94■■■□□ 2.06
LSM7-203ENST00000585409 DDX60LQ5H9U9 1706 aaKnown RBP27.93■■■□□ 2.06
LSM7-203ENST00000585409 TEX11Q8IYF3 940 aa27.93■■■□□ 2.06
LSM7-203ENST00000585409 AS3MTQ9HBK9 375 aa27.93■■■□□ 2.06
LSM7-203ENST00000585409 MORF4L1Q9UBU8 362 aa27.93■■■□□ 2.06
LSM7-203ENST00000585409 STAP2Q9UGK3 403 aa27.93■■■□□ 2.06
LSM7-203ENST00000585409 SOX1O00570 391 aaPredicted RBP27.92■■■□□ 2.06
LSM7-203ENST00000585409 BAG3O95817 575 aa27.92■■■□□ 2.06
LSM7-203ENST00000585409 ZSCAN25Q6NSZ9 544 aa27.92■■■□□ 2.06
LSM7-203ENST00000585409 CERS3Q8IU89 383 aa27.92■■■□□ 2.06
LSM7-203ENST00000585409 SH3RF3Q8TEJ3 882 aaPredicted RBP27.92■■■□□ 2.06
LSM7-203ENST00000585409 WDR18Q9BV38 432 aa27.92■■■□□ 2.06
LSM7-203ENST00000585409 RPTORQ8N122 1335 aa27.92■■■□□ 2.06
LSM7-203ENST00000585409 MYO5AQ9Y4I1 1855 aaKnown RBP27.91■■■□□ 2.06
LSM7-203ENST00000585409 PI4KBQ9UBF8 816 aa27.91■■■□□ 2.06
LSM7-203ENST00000585409 SALL3Q9BXA9 1300 aa27.91■■■□□ 2.06
LSM7-203ENST00000585409 PLCG2P16885 1265 aa27.9■■■□□ 2.06
LSM7-203ENST00000585409 MNX1P50219 401 aaPredicted RBP27.9■■■□□ 2.06
LSM7-203ENST00000585409 PDE1AP54750 535 aa27.9■■■□□ 2.06
LSM7-203ENST00000585409 TRIM32Q13049 653 aa27.9■■■□□ 2.06
LSM7-203ENST00000585409 OTUD7AQ8TE49 926 aaPredicted RBP27.9■■■□□ 2.06
LSM7-203ENST00000585409 DHX36Q9H2U1 1008 aaKnown RBP27.9■■■□□ 2.06
LSM7-203ENST00000585409 ANTXR1Q9H6X2 564 aa27.9■■■□□ 2.06
LSM7-203ENST00000585409 HMX1Q9NP08 348 aaPredicted RBP27.9■■■□□ 2.06
LSM7-203ENST00000585409 NDUFB9Q9Y6M9 179 aa27.9■■■□□ 2.06
LSM7-203ENST00000585409 HOXA7P31268 230 aaPredicted RBP27.89■■■□□ 2.06
LSM7-203ENST00000585409 MTMR2Q13614 643 aa27.89■■■□□ 2.06
LSM7-203ENST00000585409 METTL16Q86W50 562 aaKnown RBP27.89■■■□□ 2.06
LSM7-203ENST00000585409 GDF15Q99988 308 aa27.89■■■□□ 2.06
LSM7-203ENST00000585409 COL6A3P12111 3177 aa27.88■■■□□ 2.05
LSM7-203ENST00000585409 BMP8BP34820 402 aa27.88■■■□□ 2.05
LSM7-203ENST00000585409 BACE1P56817 501 aa27.88■■■□□ 2.05
LSM7-203ENST00000585409 JAG1P78504 1218 aa27.88■■■□□ 2.05
LSM7-203ENST00000585409 MAGEB6Q8N7X4 407 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms