RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 MAP3K10Q02779 954 aa27.74■■■□□ 2.03
LSM7-202ENST00000585395 APPBP2Q92624 585 aa27.74■■■□□ 2.03
LSM7-202ENST00000585395 RILPL2Q969X0 211 aa27.74■■■□□ 2.03
LSM7-202ENST00000585395 ATAD5Q96QE3 1844 aa27.72■■■□□ 2.03
LSM7-202ENST00000585395 PTPRAP18433 802 aa27.72■■■□□ 2.03
LSM7-202ENST00000585395 FAM43AQ8N2R8 423 aa27.72■■■□□ 2.03
LSM7-202ENST00000585395 DDRGK1Q96HY6 314 aa27.72■■■□□ 2.03
LSM7-202ENST00000585395 HIP1O00291 1037 aa27.71■■■□□ 2.03
LSM7-202ENST00000585395 TTC22Q5TAA0 569 aa27.71■■■□□ 2.03
LSM7-202ENST00000585395 FOXP4Q8IVH2 680 aaPredicted RBP27.71■■■□□ 2.03
LSM7-202ENST00000585395 RIOK1Q9BRS2 568 aaKnown RBP27.71■■■□□ 2.03
LSM7-202ENST00000585395 KCNH4Q9UQ05 1017 aa27.71■■■□□ 2.03
LSM7-202ENST00000585395 NAV1Q8NEY1 1877 aa27.7■■■□□ 2.03
LSM7-202ENST00000585395 BTBD19C9JJ37 291 aa27.7■■■□□ 2.02
LSM7-202ENST00000585395 CXCL11O14625 94 aa27.7■■■□□ 2.02
LSM7-202ENST00000585395 MBD4O95243 580 aa27.69■■■□□ 2.02
LSM7-202ENST00000585395 POLR3DP05423 398 aaPredicted RBP27.69■■■□□ 2.02
LSM7-202ENST00000585395 GADL1Q6ZQY3 521 aa27.69■■■□□ 2.02
LSM7-202ENST00000585395 TTC6Q86TZ1 520 aa27.69■■■□□ 2.02
LSM7-202ENST00000585395 TRIM75PA6NK02 468 aa27.68■■■□□ 2.02
LSM7-202ENST00000585395 ZCCHC17Q9NP64 241 aaKnown RBP27.68■■■□□ 2.02
LSM7-202ENST00000585395 SIPA1L1O43166 1804 aa27.68■■■□□ 2.02
LSM7-202ENST00000585395 RANBP2P49792 3224 aaKnown RBP27.68■■■□□ 2.02
LSM7-202ENST00000585395 GNRH1P01148 92 aa27.67■■■□□ 2.02
LSM7-202ENST00000585395 GNAT2P19087 354 aa27.67■■■□□ 2.02
LSM7-202ENST00000585395 CAP2P40123 477 aa27.67■■■□□ 2.02
LSM7-202ENST00000585395 FASTKD5Q7L8L6 764 aaKnown RBP27.67■■■□□ 2.02
LSM7-202ENST00000585395 ANKRD23Q86SG2 305 aa27.67■■■□□ 2.02
LSM7-202ENST00000585395 LCORLQ8N3X6 602 aa27.67■■■□□ 2.02
LSM7-202ENST00000585395 ARMT1Q9H993 441 aa27.67■■■□□ 2.02
LSM7-202ENST00000585395 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.67■■■□□ 2.02
LSM7-202ENST00000585395 KIF22Q14807 665 aa27.66■■■□□ 2.02
LSM7-202ENST00000585395 CHRDL2Q6WN34 429 aa27.66■■■□□ 2.02
LSM7-202ENST00000585395 CCDC84Q86UT8 332 aaPredicted RBP27.66■■■□□ 2.02
LSM7-202ENST00000585395 AMOTL1Q8IY63 956 aa27.66■■■□□ 2.02
LSM7-202ENST00000585395 AS3MTQ9HBK9 375 aa27.66■■■□□ 2.02
LSM7-202ENST00000585395 PDHXO00330 501 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 MYCP01106 439 aaPredicted RBP27.65■■■□□ 2.02
LSM7-202ENST00000585395 PRMT2P55345 433 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 ZMYM1Q5SVZ6 1142 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 SH3TC2Q8TF17 1288 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 TBC1D2Q9BYX2 928 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 PUS7LQ9H0K6 701 aaKnown RBP27.65■■■□□ 2.02
LSM7-202ENST00000585395 HELLSQ9NRZ9 838 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 DIAPH3Q9NSV4 1193 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 ATP8A2Q9NTI2 1148 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 MCM9Q9NXL9 1143 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 AFG3L2Q9Y4W6 797 aa27.65■■■□□ 2.02
LSM7-202ENST00000585395 USP17L5A8MUK1 530 aa27.64■■■□□ 2.02
LSM7-202ENST00000585395 TLR2O60603 784 aa27.64■■■□□ 2.02
LSM7-202ENST00000585395 SDR42E1Q8WUS8 393 aa27.64■■■□□ 2.02
LSM7-202ENST00000585395 SERPINB13Q9UIV8 391 aa27.64■■■□□ 2.02
LSM7-202ENST00000585395 PHIPQ8WWQ0 1821 aa27.64■■■□□ 2.01
LSM7-202ENST00000585395 A0A0G2JLL6 359 aaPredicted RBP27.63■■■□□ 2.01
LSM7-202ENST00000585395 GDF11O95390 407 aa27.63■■■□□ 2.01
LSM7-202ENST00000585395 ASNSP08243 561 aa27.63■■■□□ 2.01
LSM7-202ENST00000585395 MFAP1P55081 439 aaKnown RBP27.63■■■□□ 2.01
LSM7-202ENST00000585395 LACTBP83111 547 aaPredicted RBP27.63■■■□□ 2.01
LSM7-202ENST00000585395 SLFNL1Q499Z3 407 aa27.63■■■□□ 2.01
LSM7-202ENST00000585395 PRRT2Q7Z6L0 340 aaPredicted RBP27.63■■■□□ 2.01
LSM7-202ENST00000585395 OSBP2Q969R2 916 aa27.63■■■□□ 2.01
LSM7-202ENST00000585395 SLC4A4Q9Y6R1 1079 aa27.63■■■□□ 2.01
LSM7-202ENST00000585395 GPAA1O43292 621 aa27.62■■■□□ 2.01
LSM7-202ENST00000585395 SDSP20132 328 aa27.62■■■□□ 2.01
LSM7-202ENST00000585395 ZNF280CQ8ND82 737 aa27.62■■■□□ 2.01
LSM7-202ENST00000585395 PARK7Q99497 189 aaKnown RBP27.62■■■□□ 2.01
LSM7-202ENST00000585395 DNAJC18Q9H819 358 aa27.62■■■□□ 2.01
LSM7-202ENST00000585395 RBM27Q9P2N5 1060 aaKnown RBP27.62■■■□□ 2.01
LSM7-202ENST00000585395 PTPRFP10586 1907 aa27.62■■■□□ 2.01
LSM7-202ENST00000585395 SPP2Q13103 211 aa27.61■■■□□ 2.01
LSM7-202ENST00000585395 DPF3Q92784 378 aa27.61■■■□□ 2.01
LSM7-202ENST00000585395 STRBPQ96SI9 672 aaKnown RBP27.61■■■□□ 2.01
LSM7-202ENST00000585395 NACAP1Q9BZK3 213 aa27.61■■■□□ 2.01
LSM7-202ENST00000585395 EHD4Q9H223 541 aa27.61■■■□□ 2.01
LSM7-202ENST00000585395 GSPT1P15170 499 aaKnown RBP27.6■■■□□ 2.01
LSM7-202ENST00000585395 RRP1BQ14684 758 aaKnown RBP27.6■■■□□ 2.01
LSM7-202ENST00000585395 MCMDC2Q4G0Z9 681 aa27.6■■■□□ 2.01
LSM7-202ENST00000585395 GIMAP6Q6P9H5 292 aa27.6■■■□□ 2.01
LSM7-202ENST00000585395 ARHGAP39Q9C0H5 1083 aa27.6■■■□□ 2.01
LSM7-202ENST00000585395 GINM1Q9NU53 330 aa27.6■■■□□ 2.01
LSM7-202ENST00000585395 TAOK2Q9UL54 1235 aa27.6■■■□□ 2.01
LSM7-202ENST00000585395 CHGBP05060 677 aa27.59■■■□□ 2.01
LSM7-202ENST00000585395 METTL16Q86W50 562 aaKnown RBP27.59■■■□□ 2.01
LSM7-202ENST00000585395 NKX2-3Q8TAU0 364 aa27.59■■■□□ 2.01
LSM7-202ENST00000585395 DCP1AQ9NPI6 582 aaPredicted RBP27.59■■■□□ 2.01
LSM7-202ENST00000585395 ZBTB21Q9ULJ3 1066 aa27.59■■■□□ 2.01
LSM7-202ENST00000585395 DDX60LQ5H9U9 1706 aaKnown RBP27.58■■■□□ 2.01
LSM7-202ENST00000585395 M0R2C6 588 aa27.58■■■□□ 2.01
LSM7-202ENST00000585395 RUFY2Q8WXA3 655 aa27.58■■■□□ 2.01
LSM7-202ENST00000585395 CABP5Q9NP86 173 aa27.58■■■□□ 2.01
LSM7-202ENST00000585395 CPA4Q9UI42 421 aa27.58■■■□□ 2.01
LSM7-202ENST00000585395 BAZ2AQ9UIF9 1905 aaKnown RBP27.58■■■□□ 2.01
LSM7-202ENST00000585395 DLL1O00548 723 aa27.57■■■□□ 2
LSM7-202ENST00000585395 PRKAB2O43741 272 aa27.57■■■□□ 2
LSM7-202ENST00000585395 APPP05067 770 aa27.57■■■□□ 2
LSM7-202ENST00000585395 PLCD1P51178 756 aa27.57■■■□□ 2
LSM7-202ENST00000585395 NMIQ13287 307 aaPredicted RBP27.57■■■□□ 2
LSM7-202ENST00000585395 MOGSQ13724 837 aa27.57■■■□□ 2
LSM7-202ENST00000585395 CERKLQ49MI3 558 aaPredicted RBP27.57■■■□□ 2
LSM7-202ENST00000585395 BMP2KLQ5H9B9 411 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms