RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 CEP44Q9C0F1 390 aa7.52□□□□□ -1.21
CRLF3-206ENST00000585268 RAD18Q9NS91 495 aa7.52□□□□□ -1.21
CRLF3-206ENST00000585268 KRT82Q9NSB4 513 aa7.52□□□□□ -1.21
CRLF3-206ENST00000585268 ACTL7BQ9Y614 415 aa7.52□□□□□ -1.21
CRLF3-206ENST00000585268 SYNGAP1Q96PV0 1343 aa7.52□□□□□ -1.21
CRLF3-206ENST00000585268 ZNF862O60290 1169 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 CELA3AP09093 270 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 LIG1P18858 919 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 ARNTP27540 789 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 MAP4P27816 1152 aaKnown RBP7.51□□□□□ -1.21
CRLF3-206ENST00000585268 DAB2P98082 770 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 ZNF252P-AS1Q0IIN9 211 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 CDPF1Q6NVV7 123 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 CLEC10AQ8IUN9 316 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 FAM83CQ9BQN1 747 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 KCNF1Q9H3M0 494 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 AP4E1Q9UPM8 1137 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 PCDHGC5Q9Y5F6 944 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 MYO3AQ8NEV4 1616 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 EFCAB6Q5THR3 1501 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 NOS1P29475 1434 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 GCC2Q8IWJ2 1684 aa7.51□□□□□ -1.21
CRLF3-206ENST00000585268 CEP170BQ9Y4F5 1589 aaPredicted RBP7.5□□□□□ -1.21
CRLF3-206ENST00000585268 NLRP1Q9C000 1473 aa7.5□□□□□ -1.21
CRLF3-206ENST00000585268 SETD1BQ9UPS6 1966 aaKnown RBP7.5□□□□□ -1.21
CRLF3-206ENST00000585268 BMP6P22004 513 aa7.5□□□□□ -1.21
CRLF3-206ENST00000585268 TMC4Q7Z404 712 aa7.5□□□□□ -1.21
CRLF3-206ENST00000585268 THEMISQ8N1K5 641 aaPredicted RBP7.5□□□□□ -1.21
CRLF3-206ENST00000585268 FAM161BQ96MY7 647 aa7.5□□□□□ -1.21
CRLF3-206ENST00000585268 GSX1Q9H4S2 264 aaPredicted RBP7.5□□□□□ -1.21
CRLF3-206ENST00000585268 PPP1R9AQ9ULJ8 1098 aa7.5□□□□□ -1.21
CRLF3-206ENST00000585268 TTF2Q9UNY4 1162 aaKnown RBP7.5□□□□□ -1.21
CRLF3-206ENST00000585268 SETD5Q9C0A6 1442 aa7.5□□□□□ -1.21
CRLF3-206ENST00000585268 RPRD2Q5VT52 1461 aaKnown RBP7.49□□□□□ -1.21
CRLF3-206ENST00000585268 IQGAP3Q86VI3 1631 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 TMPRSS2O15393 492 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 GSC2O15499 205 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 IGLV1-40P01703 118 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 NFIAQ12857 509 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 KIF4BQ2VIQ3 1234 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 ZMYM1Q5SVZ6 1142 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 TMCO4Q5TGY1 634 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 RASIP1Q5U651 963 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 MAP1SQ66K74 1059 aaPredicted RBP7.49□□□□□ -1.21
CRLF3-206ENST00000585268 FBLIM1Q8WUP2 373 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 KCNB2Q92953 911 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 EMILIN2Q9BXX0 1053 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 FAM105AQ9NUU6 356 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 CACNA2D2Q9NY47 1150 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 UGGT1Q9NYU2 1555 aa7.49□□□□□ -1.21
CRLF3-206ENST00000585268 RAB3GAP2Q9H2M9 1393 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 TET3O43151 1660 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 SYNMO15061 1565 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 USP11P51784 963 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 PSMD2Q13200 908 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 PCNX4Q63HM2 1172 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 RNF43Q68DV7 783 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 MPRIPQ6WCQ1 1025 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 DYMQ7RTS9 669 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 SLC51AQ86UW1 340 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 GRIN3AQ8TCU5 1115 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 EZH1Q92800 747 aaPredicted RBP7.48□□□□□ -1.21
CRLF3-206ENST00000585268 MPHOSPH9Q99550 1183 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 SLC52A1Q9NWF4 448 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 CRIM1Q9NZV1 1036 aa7.48□□□□□ -1.21
CRLF3-206ENST00000585268 ZNF142P52746 1687 aaPredicted RBP7.47□□□□□ -1.21
CRLF3-206ENST00000585268 CTSHP09668 335 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 RXRBP28702 533 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 LTKP29376 864 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 XPCQ01831 940 aaPredicted RBP7.47□□□□□ -1.21
CRLF3-206ENST00000585268 MEI1Q5TIA1 1274 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 SV2BQ7L1I2 683 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 ANKLE2Q86XL3 938 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 GPBAR1Q8TDU6 330 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 DBNDD2Q9BQY9 259 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 ACSS3Q9H6R3 686 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 CBX8Q9HC52 389 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 SAMM50Q9Y512 469 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 PLA2R1Q13018 1463 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 E9PCH4 1651 aa7.47□□□□□ -1.21
CRLF3-206ENST00000585268 CFAP65Q6ZU64 1925 aaKnown RBP7.46□□□□□ -1.21
CRLF3-206ENST00000585268 STRCQ7RTU9 1775 aa7.46□□□□□ -1.21
CRLF3-206ENST00000585268 PTPRTO14522 1441 aa7.46□□□□□ -1.21
CRLF3-206ENST00000585268 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.46□□□□□ -1.22
CRLF3-206ENST00000585268 FAM95CA0A1B0GW59 222 aa7.46□□□□□ -1.22
CRLF3-206ENST00000585268 RAB6AP20340 208 aa7.46□□□□□ -1.22
CRLF3-206ENST00000585268 HNRNPUQ00839 825 aaKnown RBP eCLIP7.46□□□□□ -1.22
CRLF3-206ENST00000585268 ID3Q02535 119 aa7.46□□□□□ -1.22
CRLF3-206ENST00000585268 FANCD2OSQ96PS1 177 aa7.46□□□□□ -1.22
CRLF3-206ENST00000585268 YIPF2Q9BWQ6 316 aa7.46□□□□□ -1.22
CRLF3-206ENST00000585268 BCL2L13Q9BXK5 485 aa7.46□□□□□ -1.22
CRLF3-206ENST00000585268 SEMA6CQ9H3T2 930 aa7.46□□□□□ -1.22
CRLF3-206ENST00000585268 PIK3C2BO00750 1634 aa7.45□□□□□ -1.22
CRLF3-206ENST00000585268 TRIM37O94972 964 aa7.45□□□□□ -1.22
CRLF3-206ENST00000585268 SLFN14P0C7P3 912 aa7.45□□□□□ -1.22
CRLF3-206ENST00000585268 ASPAP45381 313 aa7.45□□□□□ -1.22
CRLF3-206ENST00000585268 LLGL2Q6P1M3 1020 aa7.45□□□□□ -1.22
CRLF3-206ENST00000585268 ZDHHC13Q8IUH4 622 aa7.45□□□□□ -1.22
CRLF3-206ENST00000585268 RNF112Q9ULX5 631 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms