RNA–Protein interactions for RNA: ENST00000584746.5

CUEDC1-212, Transcript of CUE domain containing 1, humanhuman

TSL 2

Gene CUEDC1, Length 2,870 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-212ENST00000584746 SGMS1Q86VZ5 419 aa20.64■□□□□ 0.9
CUEDC1-212ENST00000584746 ENAHQ8N8S7 591 aaPredicted RBP20.64■□□□□ 0.9
CUEDC1-212ENST00000584746 CELF1Q92879 486 aaKnown RBP20.64■□□□□ 0.9
CUEDC1-212ENST00000584746 WDR24Q96S15 920 aa20.64■□□□□ 0.9
CUEDC1-212ENST00000584746 LZTFL1Q9NQ48 299 aa20.64■□□□□ 0.9
CUEDC1-212ENST00000584746 MAGEB6P1A0A0J9YX57 407 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 AKAP17AQ02040 695 aaKnown RBP20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 ARHGAP29Q52LW3 1261 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 ZNF771Q7L3S4 317 aaPredicted RBP20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 CARD6Q9BX69 1037 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 ZNF446Q9NWS9 450 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 SHANK3Q9BYB0 1731 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 BCL9O00512 1426 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 LOC102724428A0A0B4J2F2 783 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 ERICH4A6NGS2 130 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 USP17L12C9JPN9 530 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 USP17L21D6R901 530 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 PPP6R2O75170 966 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 IFNAR1P17181 557 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 CCT6AP40227 531 aaKnown RBP20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 SIK1P57059 783 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 CCDC87Q9NVE4 849 aa20.64■□□□□ 0.89
CUEDC1-212ENST00000584746 C4AP0C0L4 1744 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 C4BP0C0L5 1744 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 ABCC12Q96J65 1359 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 CUTAO60888 179 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 CD44P16070 742 aaKnown RBP20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 ZNF384Q8TF68 577 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 SMARCE1Q969G3 411 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 CPVLQ9H3G5 476 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 EIF5P55010 431 aaKnown RBP20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 CCDC152Q4G0S7 254 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 CCDC150Q8NCX0 1101 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 KRT23Q9C075 422 aa20.63■□□□□ 0.89
CUEDC1-212ENST00000584746 SOWAHDA6NJG2 315 aa20.62■□□□□ 0.89
CUEDC1-212ENST00000584746 LIFRP42702 1097 aa20.62■□□□□ 0.89
CUEDC1-212ENST00000584746 GNG11P61952 73 aa20.62■□□□□ 0.89
CUEDC1-212ENST00000584746 IFIT1BQ5T764 474 aaKnown RBP20.62■□□□□ 0.89
CUEDC1-212ENST00000584746 SYMPKQ92797 1274 aaKnown RBP20.62■□□□□ 0.89
CUEDC1-212ENST00000584746 DCCP43146 1447 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 CAMTA2O94983 1202 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 MCM7P33993 719 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 MDM2Q00987 491 aaPredicted RBP20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 DDB1Q16531 1140 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 VSTM4Q8IW00 320 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 GPKOWQ92917 476 aaPredicted RBP eCLIP20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 MYH2Q9UKX2 1941 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 PRDX5P30044 214 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 DMTNQ08495 405 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 BAZ2AQ9UIF9 1905 aaKnown RBP20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 NUP98P52948 1817 aa20.61■□□□□ 0.89
CUEDC1-212ENST00000584746 PIK3AP1Q6ZUJ8 805 aa20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 TXNRD3Q86VQ6 643 aa20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 CGNQ9P2M7 1197 aaKnown RBP20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 IMPACTQ9P2X3 320 aa20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 PES1O00541 588 aaKnown RBP20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 ABL1P00519 1130 aa20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 MARCH10Q8NA82 808 aaPredicted RBP20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 BPIFA3Q9BQP9 254 aa20.6■□□□□ 0.89
CUEDC1-212ENST00000584746 SPEF2Q9C093 1822 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 DEXIO95424 95 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 PTPREP23469 700 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 STAG1Q8WVM7 1258 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 CNNM2Q9H8M5 875 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 PCNTO95613 3336 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 IKBKBO14920 756 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 NTSR2O95665 410 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 PKN1Q16512 942 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 BAG1Q99933 345 aaPredicted RBP20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 PPP2R2CQ9Y2T4 447 aa20.59■□□□□ 0.89
CUEDC1-212ENST00000584746 ITGB4P16144 1822 aa20.58■□□□□ 0.89
CUEDC1-212ENST00000584746 DPYDQ12882 1025 aa20.58■□□□□ 0.89
CUEDC1-212ENST00000584746 TRIM65Q6PJ69 517 aa20.58■□□□□ 0.89
CUEDC1-212ENST00000584746 XIRP1Q702N8 1843 aaKnown RBP20.58■□□□□ 0.89
CUEDC1-212ENST00000584746 DDX41Q9UJV9 622 aaKnown RBP20.58■□□□□ 0.89
CUEDC1-212ENST00000584746 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.58■□□□□ 0.89
CUEDC1-212ENST00000584746 ERCC3P19447 782 aa20.58■□□□□ 0.88
CUEDC1-212ENST00000584746 REXO1L1PQ8IX06 675 aa20.58■□□□□ 0.88
CUEDC1-212ENST00000584746 ERO1AQ96HE7 468 aa20.58■□□□□ 0.88
CUEDC1-212ENST00000584746 ZSCAN10Q96SZ4 725 aaPredicted RBP20.58■□□□□ 0.88
CUEDC1-212ENST00000584746 PP2D1A8MPX8 630 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 POLR3GO15318 223 aaPredicted RBP20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 ETF1P62495 437 aaKnown RBP20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 TEX35Q5T0J7 233 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 MNS1Q8NEH6 495 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 ESR2Q92731 530 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 DYNLL2Q96FJ2 89 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 UIMC1Q96RL1 719 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 TFR2Q9UP52 801 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 ACTN4O43707 911 aaKnown RBP20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 NRDCO43847 1150 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 CLCN6P51797 869 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 ZNF512BQ96KM6 892 aaPredicted RBP20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 OGFRQ9NZT2 677 aa20.57■□□□□ 0.88
CUEDC1-212ENST00000584746 PTGDRQ13258 359 aa20.56■□□□□ 0.88
CUEDC1-212ENST00000584746 ZNF397Q8NF99 534 aaPredicted RBP20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms