RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 MYL5Q02045 173 aa12.9□□□□□ -0.35
TOP3A-217ENST00000584582 SNW1Q13573 536 aaKnown RBP12.9□□□□□ -0.35
TOP3A-217ENST00000584582 NAA30Q147X3 362 aaPredicted RBP12.9□□□□□ -0.35
TOP3A-217ENST00000584582 RILPL1Q5EBL4 403 aa12.9□□□□□ -0.35
TOP3A-217ENST00000584582 JAKMIP3Q5VZ66 844 aa12.9□□□□□ -0.35
TOP3A-217ENST00000584582 SPTY2D1Q68D10 685 aaPredicted RBP12.9□□□□□ -0.35
TOP3A-217ENST00000584582 ZNF804AQ7Z570 1209 aa12.9□□□□□ -0.35
TOP3A-217ENST00000584582 ANKRD2Q9GZV1 360 aa12.9□□□□□ -0.35
TOP3A-217ENST00000584582 CSRNP2Q9H175 543 aa12.9□□□□□ -0.35
TOP3A-217ENST00000584582 CMA1P23946 247 aa12.89□□□□□ -0.35
TOP3A-217ENST00000584582 PPP4R3BQ5MIZ7 849 aa12.89□□□□□ -0.35
TOP3A-217ENST00000584582 ENAHQ8N8S7 591 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-217ENST00000584582 KCNF1Q9H3M0 494 aa12.89□□□□□ -0.35
TOP3A-217ENST00000584582 RRP9O43818 475 aaKnown RBP12.89□□□□□ -0.35
TOP3A-217ENST00000584582 ARID4AP29374 1257 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-217ENST00000584582 ADKP55263 362 aaKnown RBP12.89□□□□□ -0.35
TOP3A-217ENST00000584582 FMR1NBQ8N0W7 255 aaPredicted RBP12.89□□□□□ -0.35
TOP3A-217ENST00000584582 KIF18AQ8NI77 898 aa12.89□□□□□ -0.35
TOP3A-217ENST00000584582 CHD2O14647 1828 aaKnown RBP12.89□□□□□ -0.35
TOP3A-217ENST00000584582 FAM170AA1A519 330 aa12.89□□□□□ -0.35
TOP3A-217ENST00000584582 POLR3EQ9NVU0 708 aa12.89□□□□□ -0.35
TOP3A-217ENST00000584582 CBFA2T2O43439 604 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 LDHCP07864 332 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 POSTNQ15063 836 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 TTC38Q5R3I4 469 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 ATL3Q6DD88 541 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 PNMA1Q8ND90 353 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 BSDC1Q9NW68 430 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-217ENST00000584582 FRMPD2Q68DX3 1309 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-217ENST00000584582 FAM208AQ9UK61 1670 aaKnown RBP12.88□□□□□ -0.35
TOP3A-217ENST00000584582 N4BP3O15049 544 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 FOXP2O15409 715 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 CAVIN2O95810 425 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 NLRP12P59046 1061 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 PTGDRQ13258 359 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 CCDC178Q5BJE1 867 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 ILDR1Q86SU0 546 aaPredicted RBP12.88□□□□□ -0.35
TOP3A-217ENST00000584582 TDRD7Q8NHU6 1098 aaKnown RBP12.88□□□□□ -0.35
TOP3A-217ENST00000584582 KIAA1524Q8TCG1 905 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 VPS16Q9H269 839 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 GOLGB1Q14789 3259 aaKnown RBP12.88□□□□□ -0.35
TOP3A-217ENST00000584582 RGPD5Q99666 1765 aa12.88□□□□□ -0.35
TOP3A-217ENST00000584582 STAT6P42226 847 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 SHC4Q6S5L8 630 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 LRRC47Q8N1G4 583 aaKnown RBP12.87□□□□□ -0.35
TOP3A-217ENST00000584582 RNF216Q9NWF9 866 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-217ENST00000584582 DACH1Q9UI36 760 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 RTL9Q8NET4 1388 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 CUTAO60888 179 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 IFNAR1P17181 557 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 TANGO6Q9C0B7 1094 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 NBPF3Q9H094 633 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 LZTFL1Q9NQ48 299 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 GGA1Q9UJY5 639 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 USP27XA6NNY8 438 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 FMNL1O95466 1100 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-217ENST00000584582 MMP1P03956 469 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 CACNB3P54284 484 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 GNG11P61952 73 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 INF2Q27J81 1249 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 NOM1Q5C9Z4 860 aaKnown RBP12.87□□□□□ -0.35
TOP3A-217ENST00000584582 SH3RF3Q8TEJ3 882 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-217ENST00000584582 ALDH8A1Q9H2A2 487 aaPredicted RBP12.87□□□□□ -0.35
TOP3A-217ENST00000584582 SLIT3O75094 1523 aa12.87□□□□□ -0.35
TOP3A-217ENST00000584582 TNNI2P48788 182 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 KRBA2Q6ZNG9 492 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 CLEC10AQ8IUN9 316 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 LRRC8AQ8IWT6 810 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 NUP88Q99567 741 aaPredicted RBP12.86□□□□□ -0.35
TOP3A-217ENST00000584582 DNA2P51530 1060 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 NAP1L1P55209 391 aaKnown RBP12.86□□□□□ -0.35
TOP3A-217ENST00000584582 VGLL2Q8N8G2 317 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 CCDC47Q96A33 483 aaKnown RBP12.86□□□□□ -0.35
TOP3A-217ENST00000584582 DESI2Q9BSY9 194 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 BCL9O00512 1426 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 FAM196BA6NMK8 535 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 DYNC1I1O14576 645 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 KRT18P05783 430 aaKnown RBP12.86□□□□□ -0.35
TOP3A-217ENST00000584582 LIFRP42702 1097 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 BTDP43251 543 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 CTR9Q6PD62 1173 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 USP17L2Q6R6M4 530 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 SEPT12Q8IYM1 358 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 SYMPKQ92797 1274 aaKnown RBP12.86□□□□□ -0.35
TOP3A-217ENST00000584582 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 MROH7-TTC4A0A0A0MT08 1334 aa12.86□□□□□ -0.35
TOP3A-217ENST00000584582 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 GSDMDP57764 484 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 RAD51AP2Q09MP3 1159 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 KIAA0825Q8IV33 1275 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 DCP1AQ9NPI6 582 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-217ENST00000584582 MAGEC2Q9UBF1 373 aaPredicted RBP12.85□□□□□ -0.35
TOP3A-217ENST00000584582 SERPINB2P05120 415 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 PKNOX2Q96KN3 472 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 CTNND2Q9UQB3 1225 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 DCCP43146 1447 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 RPS6KA4O75676 772 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 RASGRP2Q7LDG7 609 aa12.85□□□□□ -0.35
TOP3A-217ENST00000584582 SAMSN1Q9NSI8 373 aaKnown RBP12.85□□□□□ -0.35
TOP3A-217ENST00000584582 A0A1W2PQ27 194 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms