RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 BMP2KQ9NSY1 1161 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-218ENST00000584450 UBXN1Q04323 297 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 OXER1Q8TDS5 423 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 EPSTI1Q96J88 318 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 ZFP91Q96JP5 570 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-218ENST00000584450 NYXQ9GZU5 481 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 CPVLQ9H3G5 476 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 KCNF1Q9H3M0 494 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 TAB2Q9NYJ8 693 aa13.55□□□□□ -0.24
ERBB2-218ENST00000584450 SOS2Q07890 1332 aaPredicted RBP13.55□□□□□ -0.24
ERBB2-218ENST00000584450 CYP2D6P10635 497 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 PTGDRQ13258 359 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 ERCC6LQ2NKX8 1250 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 TDRD12Q587J7 1177 aaKnown RBP13.54□□□□□ -0.24
ERBB2-218ENST00000584450 CELF1Q92879 486 aaKnown RBP13.54□□□□□ -0.24
ERBB2-218ENST00000584450 GUCA1BQ9UMX6 200 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 USP27XA6NNY8 438 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 WDHD1O75717 1129 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-218ENST00000584450 PRDX5P30044 214 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 ANTXR2P58335 489 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 MCM6Q14566 821 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 ZNF569Q5MCW4 686 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 DYNLL2Q96FJ2 89 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 CCDC94Q9BW85 323 aaPredicted RBP13.54□□□□□ -0.24
ERBB2-218ENST00000584450 A0A1W2PQ27 194 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 A0A1W2PQ64 194 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 A0A1W2PQD8 194 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 PLEKHA8P1O95397 391 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 USP17L8P0C7I0 530 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 CACNA2D4Q7Z3S7 1137 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 MRFAP1L1Q96HT8 127 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
ERBB2-218ENST00000584450 CALM1P0DP23 149 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 CALM2P0DP24 149 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 CALM3P0DP25 149 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 ARID5AQ03989 594 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-218ENST00000584450 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.53□□□□□ -0.24
ERBB2-218ENST00000584450 TXKP42681 527 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 RAD51AP2Q09MP3 1159 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 AXDND1Q5T1B0 1012 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-218ENST00000584450 FMR1NBQ8N0W7 255 aaPredicted RBP13.53□□□□□ -0.24
ERBB2-218ENST00000584450 CALML4Q96GE6 196 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 ZC3H12CQ9C0D7 883 aaKnown RBP13.53□□□□□ -0.24
ERBB2-218ENST00000584450 ZNF804AQ7Z570 1209 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 EXOC1Q9NV70 894 aa13.53□□□□□ -0.24
ERBB2-218ENST00000584450 GSG1L2A8MUP6 293 aa13.52□□□□□ -0.24
ERBB2-218ENST00000584450 RHOXF2BP0C7M4 288 aa13.52□□□□□ -0.24
ERBB2-218ENST00000584450 CCDC181Q5TID7 509 aa13.52□□□□□ -0.24
ERBB2-218ENST00000584450 RHOXF2Q9BQY4 288 aa13.52□□□□□ -0.24
ERBB2-218ENST00000584450 ANKRD2Q9GZV1 360 aa13.52□□□□□ -0.24
ERBB2-218ENST00000584450 SAMSN1Q9NSI8 373 aaKnown RBP13.52□□□□□ -0.24
ERBB2-218ENST00000584450 CALML3P27482 149 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 INF2Q27J81 1249 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 SYMPKQ92797 1274 aaKnown RBP13.52□□□□□ -0.25
ERBB2-218ENST00000584450 MMRN2Q9H8L6 949 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 FAM205CA6NFA0 338 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 CCDC175P0C221 793 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 TCP10Q12799 353 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 FKBP15Q5T1M5 1219 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 PNMA1Q8ND90 353 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 CAPZA3Q96KX2 299 aa13.52□□□□□ -0.25
ERBB2-218ENST00000584450 AKR1B15C9JRZ8 316 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 MYO1BO43795 1136 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 CCNT1O60563 726 aaKnown RBP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 TCERG1LQ5VWI1 586 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 MLKLQ8NB16 471 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 SEPT11Q9NVA2 429 aaKnown RBP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 DLG5Q8TDM6 1919 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 WTIPA6NIX2 430 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 PSMA7O14818 248 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 BMP15O95972 392 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 IFNAR1P17181 557 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 ARID4AP29374 1257 aaPredicted RBP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 CASP7P55210 303 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 ST5P78524 1137 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 SPA17Q15506 151 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 TMEM266Q2M3C6 531 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 SYNRGQ9UMZ2 1314 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 PHACTR2O75167 634 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 GTF2F1P35269 517 aaKnown RBP eCLIP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 DYMQ7RTS9 669 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 RUFY1Q96T51 708 aa13.51□□□□□ -0.25
ERBB2-218ENST00000584450 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 RBM28Q9NW13 759 aaKnown RBP13.51□□□□□ -0.25
ERBB2-218ENST00000584450 TMEM232C9JQI7 657 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 MMP1P03956 469 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 TERF1P54274 439 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 EVCP57679 992 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 GTF2IP78347 998 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 TRIM28Q13263 835 aaKnown RBP13.5□□□□□ -0.25
ERBB2-218ENST00000584450 CCDC40Q4G0X9 1142 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 HINFPQ9BQA5 517 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 CENPHQ9H3R5 247 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 ERVV-1B6SEH8 477 aa13.5□□□□□ -0.25
ERBB2-218ENST00000584450 FMNL1O95466 1100 aaPredicted RBP13.5□□□□□ -0.25
ERBB2-218ENST00000584450 GNAQP50148 359 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms