RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 RGL1Q9NZL6 768 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 EMILIN1Q9Y6C2 1016 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 CREB3O43889 395 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 KRT9P35527 623 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 SEC24CP53992 1094 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 POLE2P56282 527 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 TOB2Q14106 344 aaPredicted RBP11.51□□□□□ -0.57
CDH8-211ENST00000584337 TAF11Q15544 211 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 ARMC9Q7Z3E5 817 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 RNF168Q8IYW5 571 aaPredicted RBP11.51□□□□□ -0.57
CDH8-211ENST00000584337 FBF1Q8TES7 1133 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 CCDC43Q96MW1 224 aaKnown RBP11.51□□□□□ -0.57
CDH8-211ENST00000584337 CDK19Q9BWU1 502 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 CLIC4Q9Y696 253 aa11.51□□□□□ -0.57
CDH8-211ENST00000584337 RASSF10A6NK89 507 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 TACC1O75410 805 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 FAM107AO95990 144 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 STX17P56962 302 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 HDLBPQ00341 1268 aaKnown RBP11.5□□□□□ -0.57
CDH8-211ENST00000584337 MEX3CQ5U5Q3 659 aaKnown RBP11.5□□□□□ -0.57
CDH8-211ENST00000584337 FBXO31Q5XUX0 539 aaPredicted RBP11.5□□□□□ -0.57
CDH8-211ENST00000584337 SWAP70Q9UH65 585 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 FANCGO15287 622 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 AHCYL1O43865 530 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 CASP14P31944 242 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 KIF5AQ12840 1032 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 PAK2Q13177 524 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 PTGISQ16647 500 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 OTUD7BQ6GQQ9 843 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 RAD9BQ6WBX8 426 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 STK11IPQ8N1F8 1099 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 MYCBPAPQ8TBZ2 947 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 SAMD15Q9P1V8 674 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 PCDHA5Q9Y5H7 936 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 RAPGEF6Q8TEU7 1601 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 KIAA0232Q92628 1395 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 SALL3Q9BXA9 1300 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 ERICH2A1L162 156 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 GCOM1H8Y6P7 765 aaPredicted RBP11.5□□□□□ -0.57
CDH8-211ENST00000584337 DIAPH2O60879 1101 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 MYZAPP0CAP1 466 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 GNAT1P11488 350 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 MYSM1Q5VVJ2 828 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 ANKRD24Q8TF21 1146 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 CCDC8Q9H0W5 538 aaPredicted RBP11.5□□□□□ -0.57
CDH8-211ENST00000584337 POLD4Q9HCU8 107 aa11.5□□□□□ -0.57
CDH8-211ENST00000584337 ARHGEF40Q8TER5 1519 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 GMNCA6NCL1 334 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 PPFIA2O75334 1257 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 RASSF9O75901 435 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 ANP32DO95626 131 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 TFRCP02786 760 aaKnown RBP11.49□□□□□ -0.57
CDH8-211ENST00000584337 CACNA2D4Q7Z3S7 1137 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 TAX1BP1Q86VP1 789 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 CCDC170Q8IYT3 715 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 SSH3Q8TE77 659 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 TATDN2Q93075 761 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 ALS2CR12Q96Q35 445 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 NCOA5Q9HCD5 579 aaKnown RBP11.49□□□□□ -0.57
CDH8-211ENST00000584337 FANCAO15360 1455 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 CHL1O00533 1208 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 SKOR1P84550 965 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 KANK3Q6NY19 840 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 RUFY4Q6ZNE9 571 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 DHX32Q7L7V1 743 aaKnown RBP11.49□□□□□ -0.57
CDH8-211ENST00000584337 TBC1D1Q86TI0 1168 aaPredicted RBP11.49□□□□□ -0.57
CDH8-211ENST00000584337 NSUN7Q8NE18 718 aaKnown RBP11.49□□□□□ -0.57
CDH8-211ENST00000584337 STAMBPL1Q96FJ0 436 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 IFT74Q96LB3 600 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 MMS19Q96T76 1030 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 KCNH3Q9ULD8 1083 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 EPN1Q9Y6I3 576 aaPredicted RBP11.49□□□□□ -0.57
CDH8-211ENST00000584337 MDH1P40925 334 aaKnown RBP11.49□□□□□ -0.57
CDH8-211ENST00000584337 C2orf54Q08AI8 447 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 ZC3H12AQ5D1E8 599 aaKnown RBP11.49□□□□□ -0.57
CDH8-211ENST00000584337 RASGRP2Q7LDG7 609 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 ARHGAP22Q7Z5H3 698 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 FAM114A1Q8IWE2 563 aa11.49□□□□□ -0.57
CDH8-211ENST00000584337 SRGAP2O75044 1071 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 HIP1RO75146 1068 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 C1orf141Q5JVX7 400 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 RALYLQ86SE5 291 aaKnown RBP11.48□□□□□ -0.57
CDH8-211ENST00000584337 MAB21L3Q8N8X9 362 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 ARL8AQ96BM9 186 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 CYFIP2Q96F07 1278 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 RNPC3Q96LT9 517 aaKnown RBP11.48□□□□□ -0.57
CDH8-211ENST00000584337 OSBPL1AQ9BXW6 950 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 NSRP1Q9H0G5 558 aaKnown RBP11.48□□□□□ -0.57
CDH8-211ENST00000584337 C14orf93Q9H972 538 aaKnown RBP11.48□□□□□ -0.57
CDH8-211ENST00000584337 A0A1W2PP64 1363 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 HMGB1P1B2RPK0 211 aaPredicted RBP11.48□□□□□ -0.57
CDH8-211ENST00000584337 SPAG1Q07617 926 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 DYNC1I2Q13409 638 aaKnown RBP11.48□□□□□ -0.57
CDH8-211ENST00000584337 TRIM14Q14142 442 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 CCDC197Q8NCU1 140 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 POLR3EQ9NVU0 708 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.48□□□□□ -0.57
CDH8-211ENST00000584337 C15orf41Q9Y2V0 281 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 MACROD2A1Z1Q3 448 aa11.48□□□□□ -0.57
CDH8-211ENST00000584337 RTN2O75298 545 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms