RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 FIBPO43427 364 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 LETM1O95202 739 aaPredicted RBP11.89□□□□□ -0.51
IFT20-213ENST00000583796 DEXIO95424 95 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 CHRNA5P30532 468 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 TGFB2P61812 414 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 SSRP1Q08945 709 aaKnown RBP11.89□□□□□ -0.51
IFT20-213ENST00000583796 TRIM29Q14134 588 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 C16orf86Q6ZW13 317 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 TTC6Q86TZ1 520 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 FERMT3Q86UX7 667 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 NKX2-3Q8TAU0 364 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 TGFBRAP1Q8WUH2 860 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 INCENPQ9NQS7 918 aa11.89□□□□□ -0.51
IFT20-213ENST00000583796 FAM217BQ9NTX9 383 aaPredicted RBP11.89□□□□□ -0.51
IFT20-213ENST00000583796 TTF2Q9UNY4 1162 aaKnown RBP11.89□□□□□ -0.51
IFT20-213ENST00000583796 MYH1P12882 1939 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 PLIN4Q96Q06 1357 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 ECM29Q5VYK3 1845 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 CYP2D7A0A087X1C5 515 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 USP17L3A6NCW0 530 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 USP17L4A6NCW7 530 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 ECE2O60344 883 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 POLR3DP05423 398 aaPredicted RBP11.88□□□□□ -0.51
IFT20-213ENST00000583796 USP17L8P0C7I0 530 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 CDC27P30260 824 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 ADD1P35611 737 aaKnown RBP11.88□□□□□ -0.51
IFT20-213ENST00000583796 MRE11P49959 708 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 TROAPQ12815 778 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 CAVIN1Q6NZI2 390 aaKnown RBP11.88□□□□□ -0.51
IFT20-213ENST00000583796 USP17L1Q7RTZ2 530 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 FAM177A1Q8N128 213 aaPredicted RBP11.88□□□□□ -0.51
IFT20-213ENST00000583796 CERS5Q8N5B7 392 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 SPATA32Q96LK8 384 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 ZDHHC15Q96MV8 337 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 ALG1Q9BT22 464 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 GZF1Q9H116 711 aaPredicted RBP11.88□□□□□ -0.51
IFT20-213ENST00000583796 MKNK2Q9HBH9 465 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 SENP2Q9HC62 589 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 SERPINA10Q9UK55 444 aa11.88□□□□□ -0.51
IFT20-213ENST00000583796 XBP1P17861 261 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 POLD1P28340 1107 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 KIF5BP33176 963 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 ZSCAN23Q3MJ62 389 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 PPP4R3BQ5MIZ7 849 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 DACT2Q5SW24 774 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 OLFM4Q6UX06 510 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 ZNF444Q8N0Y2 327 aaPredicted RBP11.87□□□□□ -0.51
IFT20-213ENST00000583796 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
IFT20-213ENST00000583796 CTCFLQ8NI51 663 aaPredicted RBP11.87□□□□□ -0.51
IFT20-213ENST00000583796 ZKSCAN3Q9BRR0 538 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 MTFR1LQ9H019 292 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 SWAP70Q9UH65 585 aa11.87□□□□□ -0.51
IFT20-213ENST00000583796 COL2A1P02458 1487 aaPredicted RBP11.87□□□□□ -0.51
IFT20-213ENST00000583796 PRDM1O75626 825 aa11.86□□□□□ -0.51
IFT20-213ENST00000583796 TSPY3P0CV98 308 aa11.86□□□□□ -0.51
IFT20-213ENST00000583796 TSPY8P0CW00 308 aa11.86□□□□□ -0.51
IFT20-213ENST00000583796 DOK7Q18PE1 504 aa11.86□□□□□ -0.51
IFT20-213ENST00000583796 MAPKAPK5Q8IW41 473 aa11.86□□□□□ -0.51
IFT20-213ENST00000583796 CRACR2BQ8N4Y2 399 aaPredicted RBP11.86□□□□□ -0.51
IFT20-213ENST00000583796 LEO1Q8WVC0 666 aaPredicted RBP11.86□□□□□ -0.51
IFT20-213ENST00000583796 EHD4Q9H223 541 aa11.86□□□□□ -0.51
IFT20-213ENST00000583796 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
IFT20-213ENST00000583796 GOLGA6L4A6NEF3 574 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 PPIP5K2O43314 1243 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 YEATS4O95619 227 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 CYP2D6P10635 497 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 CRKP46108 304 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 GNAQP50148 359 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 MMP14P50281 582 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 TFAP4Q01664 338 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 AKAP17AQ02040 695 aaKnown RBP11.85□□□□□ -0.51
IFT20-213ENST00000583796 SAFBQ15424 915 aaKnown RBP eCLIP11.85□□□□□ -0.51
IFT20-213ENST00000583796 FOXD4L6Q3SYB3 417 aaPredicted RBP11.85□□□□□ -0.51
IFT20-213ENST00000583796 CCDC183Q5T5S1 534 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 FOXD4L3Q6VB84 417 aaPredicted RBP11.85□□□□□ -0.51
IFT20-213ENST00000583796 NBPF11Q86T75 865 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 NEDD1Q8NHV4 660 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 FBXW7Q969H0 707 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 CHAMP1Q96JM3 812 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 SLC26A6Q9BXS9 759 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 DHX36Q9H2U1 1008 aaKnown RBP11.85□□□□□ -0.51
IFT20-213ENST00000583796 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 DBNDD1Q9H9R9 158 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 GDPD2Q9HCC8 539 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 RCOR1Q9UKL0 485 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 SCN9AQ15858 1988 aa11.85□□□□□ -0.51
IFT20-213ENST00000583796 PRPF3O43395 683 aaKnown RBP11.84□□□□□ -0.51
IFT20-213ENST00000583796 GADD45BO75293 160 aaPredicted RBP11.84□□□□□ -0.51
IFT20-213ENST00000583796 WDHD1O75717 1129 aaPredicted RBP11.84□□□□□ -0.51
IFT20-213ENST00000583796 HLA-DOAP06340 250 aa11.84□□□□□ -0.51
IFT20-213ENST00000583796 RXRAP19793 462 aa11.84□□□□□ -0.51
IFT20-213ENST00000583796 U2AF2P26368 475 aaKnown RBP eCLIP11.84□□□□□ -0.512e-7■■■□□ 17.6
IFT20-213ENST00000583796 NOVP48745 357 aa11.84□□□□□ -0.51
IFT20-213ENST00000583796 PLCD1P51178 756 aa11.84□□□□□ -0.51
IFT20-213ENST00000583796 KIF23Q02241 960 aaPredicted RBP11.84□□□□□ -0.51
IFT20-213ENST00000583796 GABPAQ06546 454 aa11.84□□□□□ -0.51
IFT20-213ENST00000583796 APOBEC3HQ6NTF7 200 aaKnown RBP11.84□□□□□ -0.51
IFT20-213ENST00000583796 TMTC3Q6ZXV5 915 aa11.84□□□□□ -0.51
IFT20-213ENST00000583796 KCNG4Q8TDN1 519 aa11.84□□□□□ -0.51
IFT20-213ENST00000583796 NUP133Q8WUM0 1156 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms