RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CSRNP1Q96S65 589 aa19.34■□□□□ 0.69
CDK5RAP3-228ENST00000583363 KRT23Q9C075 422 aa19.34■□□□□ 0.69
CDK5RAP3-228ENST00000583363 SWAP70Q9UH65 585 aa19.34■□□□□ 0.69
CDK5RAP3-228ENST00000583363 PPP2R3BQ9Y5P8 575 aa19.34■□□□□ 0.69
CDK5RAP3-228ENST00000583363 NEDD4P46934 1319 aa19.33■□□□□ 0.69
CDK5RAP3-228ENST00000583363 LAMA4Q16363 1823 aa19.33■□□□□ 0.69
CDK5RAP3-228ENST00000583363 CA12O43570 354 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 TBC1D12O60347 775 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 HMGB1P09429 215 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CASTP20810 708 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 EXOSC10Q01780 885 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 MAP3K10Q02779 954 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 COL9A3Q14050 684 aaPredicted RBP19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 BLOC1S2Q6QNY1 142 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 RUFY3Q7L099 469 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 DHX32Q7L7V1 743 aaKnown RBP19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 USP48Q86UV5 1035 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CDAN1Q8IWY9 1227 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 MB21D2Q8IYB1 491 aaPredicted RBP19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 ZIC5Q96T25 663 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 MKNK2Q9HBH9 465 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 ZNF287Q9HBT7 754 aa19.33■□□□□ 0.68
CDK5RAP3-228ENST00000583363 B4E1Z4 1266 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 PRDM1O75626 825 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 SLURP2P0DP57 97 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CPA1P15085 419 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 NT5C2P49902 561 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 RRP12Q5JTH9 1297 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 RALYLQ86SE5 291 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 SLC44A5Q8NCS7 719 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 IL27Q8NEV9 243 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 ZSWIM5Q9P217 1185 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 RBM19Q9Y4C8 960 aaKnown RBP19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CYP46A1Q9Y6A2 500 aa19.32■□□□□ 0.68
CDK5RAP3-228ENST00000583363 RPS6KB1P23443 525 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 SHMT1P34896 483 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 RGS19P49795 217 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 NEK4P51957 841 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 NBPF12Q5TAG4 269 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 SULF1Q8IWU6 871 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 ZNF444Q8N0Y2 327 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CRACR2BQ8N4Y2 399 aaPredicted RBP19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 ESR2Q92731 530 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 UPF3BQ9BZI7 483 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 MCOLN1Q9GZU1 580 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 DNAJC18Q9H819 358 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 TOMM22Q9NS69 142 aa19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 HERC5Q9UII4 1024 aaKnown RBP19.31■□□□□ 0.68
CDK5RAP3-228ENST00000583363 LAMB1P07942 1786 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 KDM4AO75164 1064 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 RASA1P20936 1047 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 MCM5P33992 734 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 HUNKP57058 714 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 PRAMEF18Q5VWM3 479 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 TATDN1Q6P1N9 297 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CYB5R4Q7L1T6 521 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 KRT26Q7Z3Y9 468 aa19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 ALDH8A1Q9H2A2 487 aaPredicted RBP19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.3■□□□□ 0.68
CDK5RAP3-228ENST00000583363 RANBP6O60518 1105 aaKnown RBP19.29■□□□□ 0.68
CDK5RAP3-228ENST00000583363 ANTXR2P58335 489 aa19.29■□□□□ 0.68
CDK5RAP3-228ENST00000583363 MLLT1Q03111 559 aaPredicted RBP19.29■□□□□ 0.68
CDK5RAP3-228ENST00000583363 NOGQ13253 232 aa19.29■□□□□ 0.68
CDK5RAP3-228ENST00000583363 MIGA2Q7L4E1 593 aa19.29■□□□□ 0.68
CDK5RAP3-228ENST00000583363 TTC14Q96N46 770 aa19.29■□□□□ 0.68
CDK5RAP3-228ENST00000583363 TRIM34Q9BYJ4 488 aa19.29■□□□□ 0.68
CDK5RAP3-228ENST00000583363 PDRG1Q9NUG6 133 aa19.29■□□□□ 0.68
CDK5RAP3-228ENST00000583363 WDR19Q8NEZ3 1342 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 FAM196BA6NMK8 535 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 ADM5C9JUS6 153 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 TFAP4Q01664 338 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 SUPT20HL1Q3ZLR7 823 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 FAM47AQ5JRC9 791 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CHST3Q7LGC8 479 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 HOOK2Q96ED9 719 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 SIPA1L1O43166 1804 aa19.28■□□□□ 0.68
CDK5RAP3-228ENST00000583363 PRC1O43663 620 aa19.27■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CERKLQ49MI3 558 aaPredicted RBP19.27■□□□□ 0.68
CDK5RAP3-228ENST00000583363 FBXL16Q8N461 479 aa19.27■□□□□ 0.68
CDK5RAP3-228ENST00000583363 NEDD1Q8NHV4 660 aa19.27■□□□□ 0.68
CDK5RAP3-228ENST00000583363 CCDC17Q96LX7 622 aa19.27■□□□□ 0.68
CDK5RAP3-228ENST00000583363 TCEANC2Q96MN5 208 aa19.27■□□□□ 0.68
CDK5RAP3-228ENST00000583363 MTA3Q9BTC8 594 aa19.27■□□□□ 0.68
CDK5RAP3-228ENST00000583363 TSPY2A6NKD2 308 aa19.26■□□□□ 0.67
CDK5RAP3-228ENST00000583363 FAM155AB1AL88 458 aaPredicted RBP19.26■□□□□ 0.67
CDK5RAP3-228ENST00000583363 SLC34A2O95436 690 aa19.26■□□□□ 0.67
CDK5RAP3-228ENST00000583363 RRP1BQ14684 758 aaKnown RBP19.26■□□□□ 0.67
CDK5RAP3-228ENST00000583363 Q6ZUG5 572 aa19.26■□□□□ 0.67
CDK5RAP3-228ENST00000583363 IGDCC4Q8TDY8 1250 aa19.26■□□□□ 0.67
CDK5RAP3-228ENST00000583363 GBA2Q9HCG7 927 aaPredicted RBP19.26■□□□□ 0.67
CDK5RAP3-228ENST00000583363 TCP11L1Q9NUJ3 509 aa19.26■□□□□ 0.67
CDK5RAP3-228ENST00000583363 PHF20L1A8MW92 1017 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 ST18O60284 1047 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 TSPY3P0CV98 308 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 TSPY8P0CW00 308 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 AKR1B1P15121 316 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 DGKZQ13574 1117 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 DCAF15Q66K64 600 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 RGMBQ6NW40 437 aa19.25■□□□□ 0.67
CDK5RAP3-228ENST00000583363 TMEM87BQ96K49 555 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms