RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 TNIP1Q15025 636 aa11.58□□□□□ -0.55
TRAPPC8-211ENST00000582539 MFSD14BQ5SR56 506 aa11.58□□□□□ -0.55
TRAPPC8-211ENST00000582539 CCDC112Q8NEF3 446 aa11.58□□□□□ -0.55
TRAPPC8-211ENST00000582539 NOC3LQ8WTT2 800 aaKnown RBP11.58□□□□□ -0.55
TRAPPC8-211ENST00000582539 SEC62Q99442 399 aaKnown RBP11.58□□□□□ -0.55
TRAPPC8-211ENST00000582539 BCORQ6W2J9 1755 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 FERMT3Q86UX7 667 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 NOSTRINQ8IVI9 506 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 CD209Q9NNX6 404 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 CDK11BP21127 795 aaKnown RBP11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 MIGA1Q8NAN2 632 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 CNNM3Q8NE01 707 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 TRIM5Q9C035 493 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 MECOMQ03112 1051 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 SLC39A14Q15043 492 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 ERMNQ8TAM6 284 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 ANKS1AQ92625 1134 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 NSUN4Q96CB9 384 aaKnown RBP11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 CALML4Q96GE6 196 aa11.58□□□□□ -0.56
TRAPPC8-211ENST00000582539 A0A0U1RQG5 324 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 TCRBV5S4A2TA0A5A2 114 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 CRY2Q49AN0 593 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 ARL6IP4Q66PJ3 421 aaKnown RBP11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 AK8Q96MA6 479 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 ARHGEF10LQ9HCE6 1279 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 MAGEC2Q9UBF1 373 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 TRIM37O94972 964 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 SRP68Q9UHB9 627 aaKnown RBP11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 USP17L12C9JPN9 530 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 USP17L21D6R901 530 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 LCORLQ8N3X6 602 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 IQUBQ8NA54 791 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 MLKLQ8NB16 471 aa11.57□□□□□ -0.56
TRAPPC8-211ENST00000582539 GCFC2P16383 781 aaKnown RBP11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 RBM5P52756 815 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 IMPACTQ9P2X3 320 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 CDC25BP30305 580 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 BTDP43251 543 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 TYRO3Q06418 890 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 CDC37L1Q7L3B6 337 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 CELF1Q92879 486 aaKnown RBP11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 ESPNB1AK53 854 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 SCG2P13521 617 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 ZNF165P49910 485 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 JDP2Q8WYK2 163 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 FOSP01100 380 aaPredicted RBP11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 GYS1P13807 737 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 FMNL3Q8IVF7 1028 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 DIS3L2Q8IYB7 885 aaKnown RBP11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 LY9Q9HBG7 655 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 AATFQ9NY61 560 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 DACT1Q9NYF0 836 aa11.56□□□□□ -0.56
TRAPPC8-211ENST00000582539 IPO7O95373 1038 aaKnown RBP11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 KIF23Q02241 960 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 STRIP1Q5VSL9 837 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 ZSCAN29Q8IWY8 852 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 BPIFA3Q9BQP9 254 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 ZNHIT6Q9NWK9 470 aaKnown RBP11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 GPR75-ASB3A0A0A6YYF3 556 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 MMP1P03956 469 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 FDX1P10109 184 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 LONP1P36776 959 aaKnown RBP11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 TERF1P54274 439 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 DCAF4Q8WV16 495 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 MAP7D2Q96T17 732 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 LUC7LQ9NQ29 371 aaKnown RBP11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 B4DLN1 442 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 EHD4Q9H223 541 aa11.55□□□□□ -0.56
TRAPPC8-211ENST00000582539 ENTPD3O75355 529 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 FGRP09769 529 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 TM4SF1P30408 202 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 NIM1KQ8IY84 436 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 SAMD3Q8N6K7 520 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 NEDD1Q8NHV4 660 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 DCP1AQ9NPI6 582 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 GRM4Q14833 912 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 TMTC3Q6ZXV5 915 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 MPHOSPH6Q99547 160 aaKnown RBP11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 MAF1Q9H063 256 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 TUBGCP6Q96RT7 1819 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 COL5A3P25940 1745 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 USP17L3A6NCW0 530 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 USP17L4A6NCW7 530 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 XRCC6P12956 609 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 TUBB4BP68371 445 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 TFAP4Q01664 338 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 FOXD4L6Q3SYB3 417 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 C12orf60Q5U649 245 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 FOXD4L3Q6VB84 417 aaPredicted RBP11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 USP17L1Q7RTZ2 530 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 SPZ1Q9BXG8 430 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 C4BP0C0L5 1744 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 ROBO3Q96MS0 1386 aa11.54□□□□□ -0.56
TRAPPC8-211ENST00000582539 CPA1P15085 419 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 CTDSPL2Q05D32 466 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 TTLL5Q6EMB2 1281 aa11.53□□□□□ -0.56
TRAPPC8-211ENST00000582539 LRRC2Q9BYS8 371 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms