RNA–Protein interactions for RNA: ENST00000582114.5

CDK5RAP3-223, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 2

Gene CDK5RAP3, Length 647 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-223	ENST00000582114	ZNF512B	Q96KM6	892 aa	Predicted RBP	14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	DEFB118	Q96PH6	123 aa		14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	TBC1D2	Q9BYX2	928 aa		14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	IL1RAPL2	Q9NP60	686 aa		14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	TMOD4	Q9NZQ9	345 aa		14.2	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	SGPL1	O95470	568 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	TFRC	P02786	760 aa	Known RBP	14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	ASNS	P08243	561 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	USP5	P45974	858 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	GCLC	P48506	637 aa	Predicted RBP	14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	BACE1	P56817	501 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	IRF5	Q13568	498 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	CHRDL2	Q6WN34	429 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	UBE2Q1	Q7Z7E8	422 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	PXYLP1	Q8TE99	480 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	WDR18	Q9BV38	432 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	ZBTB21	Q9ULJ3	1066 aa		14.19	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	USP17L10	C9JJH3	530 aa		14.18	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	GH2	P01242	217 aa		14.18	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	FXR1	P51114	621 aa	Known RBP eCLIP	14.18	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	TRIM32	Q13049	653 aa		14.18	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	ZYX	Q15942	572 aa	Known RBP	14.18	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	METTL16	Q86W50	562 aa	Known RBP	14.18	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	FOXP4	Q8IVH2	680 aa	Predicted RBP	14.18	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	P2RX7	Q99572	595 aa	Known RBP	14.18	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	MYH1	P12882	1939 aa		14.17	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	ERC1	Q8IUD2	1116 aa		14.17	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	HTATIP2	Q9BUP3	242 aa		14.17	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	TXNRD2	Q9NNW7	524 aa		14.17	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	ZBED9	Q6R2W3	1325 aa		14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	CEP290	O15078	2479 aa		14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	CYP2B6	P20813	491 aa		14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	HERVK_113	P62684	666 aa		14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	MAP3K12	Q12852	859 aa		14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	RHPN1	Q8TCX5	695 aa		14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	PAGR1	Q9BTK6	254 aa		14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	XRN2	Q9H0D6	950 aa	Known RBP eCLIP	14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	PAK6	Q9NQU5	681 aa	Predicted RBP	14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	GJD2	Q9UKL4	321 aa		14.16	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	C19orf81	C9J6K1	198 aa		14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	HMGCR	P04035	888 aa		14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	HOXA7	P31268	230 aa	Predicted RBP	14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	RAB3GAP1	Q15042	981 aa		14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	DIS3L	Q8TF46	1054 aa	Known RBP	14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	DNAJC2	Q99543	621 aa	Known RBP	14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	FEZ1	Q99689	392 aa		14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	EMILIN3	Q9NT22	766 aa		14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	RBM27	Q9P2N5	1060 aa	Known RBP	14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	MORF4L1	Q9UBU8	362 aa		14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	PLXNB2	O15031	1838 aa		14.15	□□□□□ -0.14
CDK5RAP3-223	ENST00000582114	MAGEB6P1	A0A0J9YX57	407 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	PLCD1	P51178	756 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	EVX2	Q03828	476 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114		Q3C1V9	767 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	CERKL	Q49MI3	558 aa	Predicted RBP	14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	USP17L2	Q6R6M4	530 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	GPRC5A	Q8NFJ5	357 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	TRIB2	Q92519	343 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	PAWR	Q96IZ0	340 aa	Known RBP	14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	RBPJL	Q9UBG7	517 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	SERPINB13	Q9UIV8	391 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	COG6	Q9Y2V7	657 aa		14.14	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	GOLIM4	O00461	696 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	EVI5	O60447	810 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	IGSF3	O75054	1194 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	PDE6A	P16499	860 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	ERVK-9	P63128	1117 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	ERVK-24	P63145	666 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	HSP90AB4P	Q58FF6	505 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	SLC9C2	Q5TAH2	1124 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	TATDN1	Q6P1N9	297 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	POTEE	Q6S8J3	1075 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	CCAR1	Q8IX12	1150 aa	Known RBP	14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	ACER1	Q8TDN7	264 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	EDC3	Q96F86	508 aa	Known RBP	14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	RIOK1	Q9BRS2	568 aa	Known RBP	14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	CRISPLD2	Q9H0B8	497 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	PORCN	Q9H237	461 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	GINM1	Q9NU53	330 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	NR2E3	Q9Y5X4	410 aa		14.13	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	TRIOBP	Q9H2D6	2365 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	POLR3D	P05423	398 aa	Predicted RBP	14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	IFIT2	P09913	472 aa	Known RBP	14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	ABCB5	Q2M3G0	1257 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	SLFNL1	Q499Z3	407 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	TTC6	Q86TZ1	520 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	CERS3	Q8IU89	383 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	SIRT2	Q8IXJ6	389 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	CLASRP	Q8N2M8	674 aa	Known RBP	14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	NUDT12	Q9BQG2	462 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	CWC22	Q9HCG8	908 aa	Known RBP	14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	HMX1	Q9NP08	348 aa	Predicted RBP	14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	NAV1	Q8NEY1	1877 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	RPTOR	Q8N122	1335 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	ZNF532	Q9HCE3	1301 aa		14.12	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	PRKAR2A	P13861	404 aa	Known RBP	14.11	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	SHMT1	P34896	483 aa		14.11	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	PDE3A	Q14432	1141 aa		14.11	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	TTF1	Q15361	905 aa	Predicted RBP	14.11	□□□□□ -0.15
CDK5RAP3-223	ENST00000582114	DDX60L	Q5H9U9	1706 aa	Known RBP	14.11	□□□□□ -0.15

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms