RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 FAM89AQ96GI7 184 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PARK7Q99497 189 aaKnown RBP10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PCGF6Q9BYE7 350 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 CXXC1Q9P0U4 656 aaPredicted RBP10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 CFAP54Q96N23 3096 aa10.14□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TRIM66O15016 1216 aa10.13□□□□□ -0.79
CDK5RAP3-221ENST00000581662 MYO1BO43795 1136 aa10.13□□□□□ -0.79
CDK5RAP3-221ENST00000581662 CFAP100Q494V2 611 aa10.13□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PPM1EQ8WY54 764 aa10.13□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
CDK5RAP3-221ENST00000581662 KCNH4Q9UQ05 1017 aa10.13□□□□□ -0.79
CDK5RAP3-221ENST00000581662 DNAH12Q6ZR08 3092 aa10.13□□□□□ -0.79
CDK5RAP3-221ENST00000581662 SPEF2Q9C093 1822 aa10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 MOXD2PA6NHM9 499 aa10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TNPO2O14787 897 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 U2AF1L5P0DN76 240 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 CYP2C8P10632 490 aa10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 U2AF1Q01081 240 aaKnown RBP eCLIP10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TNFAIP1Q13829 316 aa10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 MAP3K21Q5TCX8 1036 aa10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 RTF1Q92541 710 aaKnown RBP10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 HMX1Q9NP08 348 aaPredicted RBP10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 CACNA1BQ00975 2339 aa10.12□□□□□ -0.79
CDK5RAP3-221ENST00000581662 CHD9Q3L8U1 2897 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ARAP2Q8WZ64 1704 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 SMIM22K7EJ46 135 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 IRS4O14654 1257 aaPredicted RBP10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 U2SURPO15042 1029 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 HTATSF1O43719 755 aaKnown RBP10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ANXA1P04083 346 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 GTF2IP78347 998 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PPATQ06203 517 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 GPAT2Q6NUI2 795 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 COPS6Q7L5N1 327 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PARP9Q8IXQ6 854 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PLEKHF1Q96S99 279 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ISCA1Q9BUE6 129 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ZNF576Q9H609 170 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TOR4AQ9NXH8 423 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 USP34Q70CQ2 3546 aa10.11□□□□□ -0.79
CDK5RAP3-221ENST00000581662 WDFY4Q6ZS81 3184 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PRR33A8MZF0 331 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ST8SIA5O15466 376 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 KLRK1P26718 216 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PPP2R1AP30153 589 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ADGRE1Q14246 886 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PDE3AQ14432 1141 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 XAGE3Q8WTP9 111 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ZKSCAN4Q969J2 545 aaPredicted RBP10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TMEM39BQ9GZU3 492 aa10.1□□□□□ -0.79
CDK5RAP3-221ENST00000581662 EPG5Q9HCE0 2579 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 WNT7AO00755 349 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 MS4A1P11836 297 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 KCNQ1P51787 676 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 PNISRQ8TF01 805 aaKnown RBP10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 FBXL18Q96ME1 805 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 WRNIP1Q96S55 665 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 GAS2L1Q99501 681 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 NUDT12Q9BQG2 462 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 TBC1D2Q9BYX2 928 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ZNF70Q9UC06 446 aaPredicted RBP10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 ZFHX4Q86UP3 3567 aa10.09□□□□□ -0.79
CDK5RAP3-221ENST00000581662 SPTBN4Q9H254 2564 aa10.08□□□□□ -0.8
CDK5RAP3-221ENST00000581662 PI4K2BG5E9Z4 385 aa10.08□□□□□ -0.8
CDK5RAP3-221ENST00000581662 CCT4P50991 539 aaKnown RBP10.08□□□□□ -0.8
CDK5RAP3-221ENST00000581662 TFF2Q03403 129 aa10.08□□□□□ -0.8
CDK5RAP3-221ENST00000581662 DIXDC1Q155Q3 683 aa10.08□□□□□ -0.8
CDK5RAP3-221ENST00000581662 KCNH6Q9H252 994 aa10.08□□□□□ -0.8
CDK5RAP3-221ENST00000581662 REV3LO60673 3130 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 TCF20Q9UGU0 1960 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 RTL5Q5HYW3 569 aaPredicted RBP10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 ANKRD18AQ8IVF6 992 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 SNIP1Q8TAD8 396 aaKnown RBP10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 TRIB2Q92519 343 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 BADQ92934 168 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 COA7Q96BR5 231 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 TIFAQ96CG3 184 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 MRGPRX2Q96LB1 330 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 PRDM12Q9H4Q4 367 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 AAASQ9NRG9 546 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 PRKAG2Q9UGJ0 569 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 MINPP1Q9UNW1 487 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 MYH3P11055 1940 aa10.07□□□□□ -0.8
CDK5RAP3-221ENST00000581662 F8W031 263 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 AIMP1Q12904 312 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 MTMR2Q13614 643 aa10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 CCDC85BQ15834 202 aaPredicted RBP10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 CCDC152Q4G0S7 254 aa10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 PRR7Q8TB68 274 aa10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 RNPC3Q96LT9 517 aaKnown RBP10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 GJD2Q9UKL4 321 aa10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 BAHCC1Q9P281 2608 aa10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 CHD7Q9P2D1 2997 aa10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 CHD8Q9HCK8 2581 aa10.06□□□□□ -0.8
CDK5RAP3-221ENST00000581662 C5orf42Q9H799 3197 aa10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 ATP5J2-PTCD1G3V325 749 aa10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 CCNYL3P0C7X3 344 aa10.05□□□□□ -0.8
CDK5RAP3-221ENST00000581662 EPHB4P54760 987 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms