RNA–Protein interactions for RNA: ENST00000581460.1

RAB11FIP4-207, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 4

Gene RAB11FIP4, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-207ENST00000581460 BACE1P56817 501 aa23.58■■□□□ 1.37
RAB11FIP4-207ENST00000581460 IRX3P78415 501 aaPredicted RBP23.58■■□□□ 1.37
RAB11FIP4-207ENST00000581460 MTFR1Q15390 333 aa23.58■■□□□ 1.37
RAB11FIP4-207ENST00000581460 TTC6Q86TZ1 520 aa23.58■■□□□ 1.37
RAB11FIP4-207ENST00000581460 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.58■■□□□ 1.37
RAB11FIP4-207ENST00000581460 COA7Q96BR5 231 aa23.58■■□□□ 1.37
RAB11FIP4-207ENST00000581460 ASCC2Q9H1I8 757 aaPredicted RBP23.58■■□□□ 1.37
RAB11FIP4-207ENST00000581460 ATAD5Q96QE3 1844 aa23.58■■□□□ 1.37
RAB11FIP4-207ENST00000581460 FLT3LGP49771 235 aa23.57■■□□□ 1.36
RAB11FIP4-207ENST00000581460 SLC9C2Q5TAH2 1124 aa23.57■■□□□ 1.36
RAB11FIP4-207ENST00000581460 TAOK2Q9UL54 1235 aa23.57■■□□□ 1.36
RAB11FIP4-207ENST00000581460 SIPA1L1O43166 1804 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 C19orf81C9J6K1 198 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 USP17L10C9JJH3 530 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 ADCY3O60266 1144 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 PDE6AP16499 860 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 JAG1P78504 1218 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 PDE3AQ14432 1141 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 NKX2-3Q8TAU0 364 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 SERPINB13Q9UIV8 391 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 CDK5RAP2Q96SN8 1893 aa23.56■■□□□ 1.36
RAB11FIP4-207ENST00000581460 FOCADQ5VW36 1801 aa23.55■■□□□ 1.36
RAB11FIP4-207ENST00000581460 GH2P01242 217 aa23.55■■□□□ 1.36
RAB11FIP4-207ENST00000581460 CCL5P13501 91 aa23.55■■□□□ 1.36
RAB11FIP4-207ENST00000581460 SHROOM1Q2M3G4 852 aaPredicted RBP23.55■■□□□ 1.36
RAB11FIP4-207ENST00000581460 CRNKL1Q9BZJ0 848 aaKnown RBP23.55■■□□□ 1.36
RAB11FIP4-207ENST00000581460 RNF208Q9H0X6 261 aa23.55■■□□□ 1.36
RAB11FIP4-207ENST00000581460 POLR3DP05423 398 aaPredicted RBP23.54■■□□□ 1.36
RAB11FIP4-207ENST00000581460 C20orf194Q5TEA3 1177 aa23.54■■□□□ 1.36
RAB11FIP4-207ENST00000581460 FEZ1Q99689 392 aa23.54■■□□□ 1.36
RAB11FIP4-207ENST00000581460 RIOK1Q9BRS2 568 aaKnown RBP23.54■■□□□ 1.36
RAB11FIP4-207ENST00000581460 EHD4Q9H223 541 aa23.54■■□□□ 1.36
RAB11FIP4-207ENST00000581460 BOLA2Q9H3K6 86 aa23.54■■□□□ 1.36
RAB11FIP4-207ENST00000581460 LOC285556D6RIA3 1793 aa23.54■■□□□ 1.36
RAB11FIP4-207ENST00000581460 ZNF532Q9HCE3 1301 aa23.54■■□□□ 1.36
RAB11FIP4-207ENST00000581460 SLC34A2O95436 690 aa23.53■■□□□ 1.36
RAB11FIP4-207ENST00000581460 BRCA2P51587 3418 aa23.53■■□□□ 1.36
RAB11FIP4-207ENST00000581460 MGAMO43451 1857 aa23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 ELNP15502 786 aa23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 IRF5Q13568 498 aa23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 RAB3GAP1Q15042 981 aa23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 CERKLQ49MI3 558 aaPredicted RBP23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 GCC1Q96CN9 775 aa23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 EDC3Q96F86 508 aaKnown RBP23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 CABP5Q9NP86 173 aa23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 PAG1Q9NWQ8 432 aa23.52■■□□□ 1.36
RAB11FIP4-207ENST00000581460 MYH1P12882 1939 aa23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 MKI67P46013 3256 aaKnown RBP23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 GJB1P08034 283 aa23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 HOXA7P31268 230 aaPredicted RBP23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 TATDN1Q6P1N9 297 aa23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 USP17L2Q6R6M4 530 aa23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 PXYLP1Q8TE99 480 aa23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 LRRCC1Q9C099 1032 aa23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 MCM9Q9NXL9 1143 aa23.51■■□□□ 1.35
RAB11FIP4-207ENST00000581460 INHAP05111 366 aa23.5■■□□□ 1.35
RAB11FIP4-207ENST00000581460 ZYXQ15942 572 aaKnown RBP23.5■■□□□ 1.35
RAB11FIP4-207ENST00000581460 ABCB5Q2M3G0 1257 aa23.5■■□□□ 1.35
RAB11FIP4-207ENST00000581460 P2RX7Q99572 595 aaKnown RBP23.5■■□□□ 1.35
RAB11FIP4-207ENST00000581460 ATP5JP18859 108 aa23.49■■□□□ 1.35
RAB11FIP4-207ENST00000581460 GJA8P48165 433 aa23.49■■□□□ 1.35
RAB11FIP4-207ENST00000581460 PLCD1P51178 756 aa23.49■■□□□ 1.35
RAB11FIP4-207ENST00000581460 HERVK_113P62684 666 aa23.49■■□□□ 1.35
RAB11FIP4-207ENST00000581460 SHISA4Q96DD7 197 aa23.49■■□□□ 1.35
RAB11FIP4-207ENST00000581460 UNC93B1Q9H1C4 597 aa23.49■■□□□ 1.35
RAB11FIP4-207ENST00000581460 MORF4L1Q9UBU8 362 aa23.49■■□□□ 1.35
RAB11FIP4-207ENST00000581460 CCAR1Q8IX12 1150 aaKnown RBP23.48■■□□□ 1.35
RAB11FIP4-207ENST00000581460 LCORLQ8N3X6 602 aa23.48■■□□□ 1.35
RAB11FIP4-207ENST00000581460 GTF3C2Q8WUA4 911 aaPredicted RBP23.48■■□□□ 1.35
RAB11FIP4-207ENST00000581460 SDR42E1Q8WUS8 393 aa23.48■■□□□ 1.35
RAB11FIP4-207ENST00000581460 HAUS7Q99871 368 aa23.48■■□□□ 1.35
RAB11FIP4-207ENST00000581460 EMILIN3Q9NT22 766 aa23.48■■□□□ 1.35
RAB11FIP4-207ENST00000581460 TCRBV5S4A2TA0A5A2 114 aa23.47■■□□□ 1.35
RAB11FIP4-207ENST00000581460 USP14P54578 494 aa23.47■■□□□ 1.35
RAB11FIP4-207ENST00000581460 GPRC5AQ8NFJ5 357 aa23.47■■□□□ 1.35
RAB11FIP4-207ENST00000581460 U2AF1L4Q8WU68 220 aaKnown RBP23.47■■□□□ 1.35
RAB11FIP4-207ENST00000581460 ARMT1Q9H993 441 aa23.47■■□□□ 1.35
RAB11FIP4-207ENST00000581460 MPHOSPH10O00566 681 aaKnown RBP23.46■■□□□ 1.35
RAB11FIP4-207ENST00000581460 SMARCA5O60264 1052 aaPredicted RBP23.46■■□□□ 1.35
RAB11FIP4-207ENST00000581460 MBD4O95243 580 aa23.46■■□□□ 1.35
RAB11FIP4-207ENST00000581460 SHMT1P34896 483 aa23.46■■□□□ 1.35
RAB11FIP4-207ENST00000581460 ADD2P35612 726 aa23.46■■□□□ 1.35
RAB11FIP4-207ENST00000581460 PAGR1Q9BTK6 254 aa23.46■■□□□ 1.35
RAB11FIP4-207ENST00000581460 DCP1AQ9NPI6 582 aaPredicted RBP23.46■■□□□ 1.35
RAB11FIP4-207ENST00000581460 C12orf42Q96LP6 360 aa23.45■■□□□ 1.34
RAB11FIP4-207ENST00000581460 CWC22Q9HCG8 908 aaKnown RBP23.45■■□□□ 1.34
RAB11FIP4-207ENST00000581460 DOCK3Q8IZD9 2030 aa23.45■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L15C9J2P7 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L13C9JLJ4 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L11C9JVI0 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L18D6R9N7 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L22D6RA61 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L17D6RBQ6 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L19D6RCP7 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L20D6RJB6 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 USP17L24Q0WX57 530 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 ZSCAN25Q6NSZ9 544 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 AMOTL1Q8IY63 956 aa23.44■■□□□ 1.34
RAB11FIP4-207ENST00000581460 DDRGK1Q96HY6 314 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms