RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 SHMT1P34896 483 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 CAP2P40123 477 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 RBM25P49756 843 aaKnown RBP16.86■□□□□ 0.29
SKA2-205ENST00000580541 MAP3K11Q16584 847 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 ABCB5Q2M3G0 1257 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 ANKRD13AQ8IZ07 590 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 WRNIP1Q96S55 665 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 PICK1Q9NRD5 415 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
SKA2-205ENST00000580541 SNX14Q9Y5W7 946 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 LAMB1P07942 1786 aa16.86■□□□□ 0.29
SKA2-205ENST00000580541 DDX60LQ5H9U9 1706 aaKnown RBP16.85■□□□□ 0.29
SKA2-205ENST00000580541 ERICH2A1L162 156 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 PHF20L1A8MW92 1017 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 PRDM1O75626 825 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 RASA1P20936 1047 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 TFAP4Q01664 338 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 PRKG1Q13976 671 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 BLOC1S2Q6QNY1 142 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 TMEM179Q6ZVK1 233 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 TBC1D10CQ8IV04 446 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 CDAN1Q8IWY9 1227 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 MTA3Q9BTC8 594 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 TBC1D2Q9BYX2 928 aa16.85■□□□□ 0.29
SKA2-205ENST00000580541 LAMA4Q16363 1823 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 DHX32Q7L7V1 743 aaKnown RBP16.84■□□□□ 0.29
SKA2-205ENST00000580541 RASEFQ8IZ41 740 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 TMTC2Q8N394 836 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 SLC44A5Q8NCS7 719 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 NEDD1Q8NHV4 660 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
SKA2-205ENST00000580541 UBAC1Q9BSL1 405 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 NBPF3Q9H094 633 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 DNAJC18Q9H819 358 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 KANSL2Q9H9L4 492 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 TCP11L1Q9NUJ3 509 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 ZSWIM5Q9P217 1185 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 CYP46A1Q9Y6A2 500 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 PASKQ96RG2 1323 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 MYH8P13535 1937 aa16.84■□□□□ 0.29
SKA2-205ENST00000580541 FAM196BA6NMK8 535 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 B4E1Z4 1266 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 KDM4AO75164 1064 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 FGD1P98174 961 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 NOL9Q5SY16 702 aaKnown RBP16.83■□□□□ 0.28
SKA2-205ENST00000580541 SCYL3Q8IZE3 742 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.83■□□□□ 0.28
SKA2-205ENST00000580541 SLC10A4Q96EP9 437 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 IL17RAQ96F46 866 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 TTC14Q96N46 770 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 TBC1D32Q96NH3 1257 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 TRPM7Q96QT4 1865 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 AS3MTQ9HBK9 375 aa16.83■□□□□ 0.28
SKA2-205ENST00000580541 WDR19Q8NEZ3 1342 aa16.82■□□□□ 0.28
SKA2-205ENST00000580541 TMEM88BA6NKF7 163 aa16.82■□□□□ 0.28
SKA2-205ENST00000580541 CASTP20810 708 aaKnown RBP16.82■□□□□ 0.28
SKA2-205ENST00000580541 EVX2Q03828 476 aa16.82■□□□□ 0.28
SKA2-205ENST00000580541 DLK2Q6UY11 383 aa16.82■□□□□ 0.28
SKA2-205ENST00000580541 TMEM87BQ96K49 555 aa16.82■□□□□ 0.28
SKA2-205ENST00000580541 INCENPQ9NQS7 918 aa16.82■□□□□ 0.28
SKA2-205ENST00000580541 NEDD4P46934 1319 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 USP17L5A8MUK1 530 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 SMIM22K7EJ46 135 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 GH2P01242 217 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 AKR1B1P15121 316 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 RAB3GAP1Q15042 981 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 FAM47AQ5JRC9 791 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 LDLRAD1Q5T700 205 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 CST9Q5W186 159 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 RUFY3Q7L099 469 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 SH2D4AQ9H788 454 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 ARHGEF10LQ9HCE6 1279 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 ZSWIM6Q9HCJ5 1215 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 ZBTB21Q9ULJ3 1066 aa16.81■□□□□ 0.28
SKA2-205ENST00000580541 UBE2Q2LH0YL09 131 aa16.8■□□□□ 0.28
SKA2-205ENST00000580541 IFIT3O14879 490 aaKnown RBP16.8■□□□□ 0.28
SKA2-205ENST00000580541 GDF11O95390 407 aa16.8■□□□□ 0.28
SKA2-205ENST00000580541 TTLL1O95922 423 aa16.8■□□□□ 0.28
SKA2-205ENST00000580541 INPP5BP32019 993 aa16.8■□□□□ 0.28
SKA2-205ENST00000580541 STOX1Q6ZVD7 989 aa16.8■□□□□ 0.28
SKA2-205ENST00000580541 DGKHQ86XP1 1220 aa16.8■□□□□ 0.28
SKA2-205ENST00000580541 ERO1BQ86YB8 467 aa16.8■□□□□ 0.28
SKA2-205ENST00000580541 MB21D2Q8IYB1 491 aaPredicted RBP16.8■□□□□ 0.28
SKA2-205ENST00000580541 ZKSCAN4Q969J2 545 aaPredicted RBP16.8■□□□□ 0.28
SKA2-205ENST00000580541 ZSCAN10Q96SZ4 725 aaPredicted RBP16.8■□□□□ 0.28
SKA2-205ENST00000580541 SIPA1L1O43166 1804 aa16.8■□□□□ 0.28
SKA2-205ENST00000580541 PAPPA2Q9BXP8 1791 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 PLIN4Q96Q06 1357 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 PRC1O43663 620 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 RPS6KB1P23443 525 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 HUNKP57058 714 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 FMR1Q06787 632 aaKnown RBP eCLIP16.79■□□□□ 0.28
SKA2-205ENST00000580541 VGLL4Q14135 290 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 RABEP1Q15276 862 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 ANKRD1Q15327 319 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 ADCK5Q3MIX3 580 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.79■□□□□ 0.28
SKA2-205ENST00000580541 MTMR4Q9NYA4 1195 aa16.79■□□□□ 0.28
SKA2-205ENST00000580541 NYAP2Q9P242 653 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms