RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 EXOC6Q8TAG9 804 aa30.02■■■□□ 2.4
CDC42EP4-205ENST00000580315 GABRQQ9UN88 632 aa30.02■■■□□ 2.4
CDC42EP4-205ENST00000580315 SLC45A1Q9Y2W3 748 aa30.02■■■□□ 2.4
CDC42EP4-205ENST00000580315 TTC41PQ6P2S7 1318 aa30.01■■■□□ 2.4
CDC42EP4-205ENST00000580315 TCRBV5S4A2TA0A5A2 114 aa30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 FAM196BA6NMK8 535 aa30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 ADD2P35612 726 aa30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 FOXP4Q8IVH2 680 aaPredicted RBP30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 CRACR2BQ8N4Y2 399 aaPredicted RBP30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 CRNKL1Q9BZJ0 848 aaKnown RBP30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 RNF208Q9H0X6 261 aa30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 RWDD1Q9H446 243 aaPredicted RBP30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 SAP30BPQ9UHR5 308 aaKnown RBP30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 PALD1Q9ULE6 856 aa30.01■■■□□ 2.39
CDC42EP4-205ENST00000580315 ERC2O15083 957 aa30■■■□□ 2.39
CDC42EP4-205ENST00000580315 UBXN2AP68543 259 aa30■■■□□ 2.39
CDC42EP4-205ENST00000580315 ANKRD45Q5TZF3 282 aa30■■■□□ 2.39
CDC42EP4-205ENST00000580315 UBE2Q1Q7Z7E8 422 aa30■■■□□ 2.39
CDC42EP4-205ENST00000580315 TRIM75PA6NK02 468 aa29.99■■■□□ 2.39
CDC42EP4-205ENST00000580315 SLAIN1Q8ND83 568 aa29.99■■■□□ 2.39
CDC42EP4-205ENST00000580315 DPF3Q92784 378 aa29.99■■■□□ 2.39
CDC42EP4-205ENST00000580315 FRMD4AQ9P2Q2 1039 aaPredicted RBP29.99■■■□□ 2.39
CDC42EP4-205ENST00000580315 UBE3CQ15386 1083 aa29.98■■■□□ 2.39
CDC42EP4-205ENST00000580315 TSHZ3Q63HK5 1081 aa29.98■■■□□ 2.39
CDC42EP4-205ENST00000580315 TRIOBPQ9H2D6 2365 aa29.98■■■□□ 2.39
CDC42EP4-205ENST00000580315 CCDC84Q86UT8 332 aaPredicted RBP29.97■■■□□ 2.39
CDC42EP4-205ENST00000580315 SMCR8Q8TEV9 937 aaPredicted RBP29.97■■■□□ 2.39
CDC42EP4-205ENST00000580315 ADCY3O60266 1144 aa29.96■■■□□ 2.39
CDC42EP4-205ENST00000580315 MX1P20591 662 aa29.96■■■□□ 2.39
CDC42EP4-205ENST00000580315 FLT3LGP49771 235 aa29.96■■■□□ 2.39
CDC42EP4-205ENST00000580315 TTC6Q86TZ1 520 aa29.96■■■□□ 2.39
CDC42EP4-205ENST00000580315 GLRX3O76003 335 aaKnown RBP29.95■■■□□ 2.39
CDC42EP4-205ENST00000580315 CAP2P40123 477 aa29.95■■■□□ 2.39
CDC42EP4-205ENST00000580315 METTL16Q86W50 562 aaKnown RBP29.95■■■□□ 2.39
CDC42EP4-205ENST00000580315 LCORLQ8N3X6 602 aa29.95■■■□□ 2.39
CDC42EP4-205ENST00000580315 KBTBD3Q8NAB2 608 aa29.95■■■□□ 2.39
CDC42EP4-205ENST00000580315 U2AF1L4Q8WU68 220 aaKnown RBP29.95■■■□□ 2.39
CDC42EP4-205ENST00000580315 UNC93B1Q9H1C4 597 aa29.95■■■□□ 2.39
CDC42EP4-205ENST00000580315 AGTPBP1Q9UPW5 1226 aa29.95■■■□□ 2.39
CDC42EP4-205ENST00000580315 RANBP2P49792 3224 aaKnown RBP29.95■■■□□ 2.38
CDC42EP4-205ENST00000580315 DOCK1Q14185 1865 aa29.94■■■□□ 2.38
CDC42EP4-205ENST00000580315 OTUD7AQ8TE49 926 aaPredicted RBP29.94■■■□□ 2.38
CDC42EP4-205ENST00000580315 ARMT1Q9H993 441 aa29.94■■■□□ 2.38
CDC42EP4-205ENST00000580315 MGAMO43451 1857 aa29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 TNPO2O14787 897 aaKnown RBP29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 MBD4O95243 580 aa29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 ELNP15502 786 aa29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 LRRFIP1Q32MZ4 808 aaKnown RBP29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 CHRDL2Q6WN34 429 aa29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 PXYLP1Q8TE99 480 aa29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 HTATIP2Q9BUP3 242 aa29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 TBC1D2Q9BYX2 928 aa29.93■■■□□ 2.38
CDC42EP4-205ENST00000580315 PHIPQ8WWQ0 1821 aa29.92■■■□□ 2.38
CDC42EP4-205ENST00000580315 POLR3DP05423 398 aaPredicted RBP29.92■■■□□ 2.38
CDC42EP4-205ENST00000580315 IRF5Q13568 498 aa29.92■■■□□ 2.38
CDC42EP4-205ENST00000580315 TREML2Q5T2D2 321 aa29.92■■■□□ 2.38
CDC42EP4-205ENST00000580315 ANKRD13CQ8N6S4 541 aa29.92■■■□□ 2.38
CDC42EP4-205ENST00000580315 EHD4Q9H223 541 aa29.92■■■□□ 2.38
CDC42EP4-205ENST00000580315 PTPRFP10586 1907 aa29.92■■■□□ 2.38
CDC42EP4-205ENST00000580315 FOCADQ5VW36 1801 aa29.92■■■□□ 2.38
CDC42EP4-205ENST00000580315 SGPL1O95470 568 aa29.91■■■□□ 2.38
CDC42EP4-205ENST00000580315 SLFNL1Q499Z3 407 aa29.91■■■□□ 2.38
CDC42EP4-205ENST00000580315 PI4K2BQ8TCG2 481 aa29.91■■■□□ 2.38
CDC42EP4-205ENST00000580315 DNAJC18Q9H819 358 aa29.91■■■□□ 2.38
CDC42EP4-205ENST00000580315 MCM9Q9NXL9 1143 aa29.91■■■□□ 2.38
CDC42EP4-205ENST00000580315 SERPINB13Q9UIV8 391 aa29.91■■■□□ 2.38
CDC42EP4-205ENST00000580315 INHAP05111 366 aa29.9■■■□□ 2.38
CDC42EP4-205ENST00000580315 ZFYP08048 801 aaPredicted RBP29.9■■■□□ 2.38
CDC42EP4-205ENST00000580315 SPP2Q13103 211 aa29.9■■■□□ 2.38
CDC42EP4-205ENST00000580315 SMC5Q8IY18 1101 aa29.9■■■□□ 2.38
CDC42EP4-205ENST00000580315 PROCA1Q8NCQ7 364 aaPredicted RBP29.9■■■□□ 2.38
CDC42EP4-205ENST00000580315 SDR42E1Q8WUS8 393 aa29.9■■■□□ 2.38
CDC42EP4-205ENST00000580315 AS3MTQ9HBK9 375 aa29.9■■■□□ 2.38
CDC42EP4-205ENST00000580315 GINM1Q9NU53 330 aa29.9■■■□□ 2.38
CDC42EP4-205ENST00000580315 CDK5RAP2Q96SN8 1893 aa29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 USP17L5A8MUK1 530 aa29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 FARP2O94887 1054 aaPredicted RBP29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 ASNSP08243 561 aa29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 RRP1BQ14684 758 aaKnown RBP29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 DDRGK1Q96HY6 314 aa29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 DCP1AQ9NPI6 582 aaPredicted RBP29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 ATP8A2Q9NTI2 1148 aa29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 PNMA3Q9UL41 463 aa29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 SZT2Q5T011 3432 aa29.89■■■□□ 2.38
CDC42EP4-205ENST00000580315 RNF113AO15541 343 aaKnown RBP29.88■■■□□ 2.37
CDC42EP4-205ENST00000580315 FAM110CQ1W6H9 321 aa29.88■■■□□ 2.37
CDC42EP4-205ENST00000580315 ZNF280CQ8ND82 737 aa29.88■■■□□ 2.37
CDC42EP4-205ENST00000580315 RBM27Q9P2N5 1060 aaKnown RBP29.88■■■□□ 2.37
CDC42EP4-205ENST00000580315 SALL3Q9BXA9 1300 aa29.88■■■□□ 2.37
CDC42EP4-205ENST00000580315 CHGBP05060 677 aa29.87■■■□□ 2.37
CDC42EP4-205ENST00000580315 COA7Q96BR5 231 aa29.87■■■□□ 2.37
CDC42EP4-205ENST00000580315 PUS7LQ9H0K6 701 aaKnown RBP29.87■■■□□ 2.37
CDC42EP4-205ENST00000580315 IGHDP01880 384 aa29.86■■■□□ 2.37
CDC42EP4-205ENST00000580315 B4GALNT3Q6L9W6 998 aa29.86■■■□□ 2.37
CDC42EP4-205ENST00000580315 AMOTL1Q8IY63 956 aa29.86■■■□□ 2.37
CDC42EP4-205ENST00000580315 APPBP2Q92624 585 aa29.86■■■□□ 2.37
CDC42EP4-205ENST00000580315 STAP2Q9UGK3 403 aa29.86■■■□□ 2.37
CDC42EP4-205ENST00000580315 SIPA1L1O43166 1804 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 PRKAB2O43741 272 aa29.85■■■□□ 2.37
CDC42EP4-205ENST00000580315 GDF11O95390 407 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms