RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 IL1RAPL2Q9NP60 686 aa16.65■□□□□ 0.26
GGA3-208ENST00000579743 CABP5Q9NP86 173 aa16.65■□□□□ 0.26
GGA3-208ENST00000579743 PTPRFP10586 1907 aa16.64■□□□□ 0.26
GGA3-208ENST00000579743 ZSWIM8A7E2V4 1837 aa16.64■□□□□ 0.25
GGA3-208ENST00000579743 PHIPQ8WWQ0 1821 aa16.64■□□□□ 0.25
GGA3-208ENST00000579743 APBB1O00213 710 aa16.64■□□□□ 0.25
GGA3-208ENST00000579743 CRNKL1Q9BZJ0 848 aaKnown RBP16.64■□□□□ 0.25
GGA3-208ENST00000579743 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
GGA3-208ENST00000579743 ZBTB21Q9ULJ3 1066 aa16.64■□□□□ 0.25
GGA3-208ENST00000579743 GABRQQ9UN88 632 aa16.64■□□□□ 0.25
GGA3-208ENST00000579743 MAGEB6P1A0A0J9YX57 407 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 HOXA7P31268 230 aaPredicted RBP16.63■□□□□ 0.25
GGA3-208ENST00000579743 SLC9C2Q5TAH2 1124 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.63■□□□□ 0.25
GGA3-208ENST00000579743 DPF3Q92784 378 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 FEZ1Q99689 392 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 BCL11AQ9H165 835 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 EHD4Q9H223 541 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 PCDH10Q9P2E7 1040 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 RCAN3Q9UKA8 241 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 COG6Q9Y2V7 657 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 ATAD5Q96QE3 1844 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 MGAMO43451 1857 aa16.63■□□□□ 0.25
GGA3-208ENST00000579743 GDF11O95390 407 aa16.62■□□□□ 0.25
GGA3-208ENST00000579743 POLR3DP05423 398 aaPredicted RBP16.62■□□□□ 0.25
GGA3-208ENST00000579743 USP14P54578 494 aa16.62■□□□□ 0.25
GGA3-208ENST00000579743 USP17L2Q6R6M4 530 aa16.62■□□□□ 0.25
GGA3-208ENST00000579743 U2AF1L4Q8WU68 220 aaKnown RBP16.62■□□□□ 0.25
GGA3-208ENST00000579743 CWC22Q9HCG8 908 aaKnown RBP16.62■□□□□ 0.25
GGA3-208ENST00000579743 ZBTB40Q9NUA8 1239 aa16.62■□□□□ 0.25
GGA3-208ENST00000579743 TNRC18O15417 2968 aaPredicted RBP16.62■□□□□ 0.25
GGA3-208ENST00000579743 SGPL1O95470 568 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 TFRCP02786 760 aaKnown RBP16.61■□□□□ 0.25
GGA3-208ENST00000579743 INHAP05111 366 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 ELNP15502 786 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 PDE3AQ14432 1141 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 RRP1BQ14684 758 aaKnown RBP16.61■□□□□ 0.25
GGA3-208ENST00000579743 CERKLQ49MI3 558 aaPredicted RBP16.61■□□□□ 0.25
GGA3-208ENST00000579743 AMOTL1Q8IY63 956 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 GPRC5AQ8NFJ5 357 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 DDRGK1Q96HY6 314 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 DNAJC2Q99543 621 aaKnown RBP16.61■□□□□ 0.25
GGA3-208ENST00000579743 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.61■□□□□ 0.256e-8■■■■□ 23.9
GGA3-208ENST00000579743 ANTXR1Q9H6X2 564 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 DNAJC18Q9H819 358 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 MORF4L1Q9UBU8 362 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 NR2E3Q9Y5X4 410 aa16.61■□□□□ 0.25
GGA3-208ENST00000579743 LOC285556D6RIA3 1793 aa16.6■□□□□ 0.25
GGA3-208ENST00000579743 GOLIM4O00461 696 aa16.6■□□□□ 0.25
GGA3-208ENST00000579743 GH2P01242 217 aa16.6■□□□□ 0.25
GGA3-208ENST00000579743 RAB3GAP1Q15042 981 aa16.6■□□□□ 0.25
GGA3-208ENST00000579743 ABCB5Q2M3G0 1257 aa16.6■□□□□ 0.25
GGA3-208ENST00000579743 UNC93B1Q9H1C4 597 aa16.6■□□□□ 0.25
GGA3-208ENST00000579743 NDUFB9Q9Y6M9 179 aa16.6■□□□□ 0.25
GGA3-208ENST00000579743 FOCADQ5VW36 1801 aa16.6■□□□□ 0.25
GGA3-208ENST00000579743 FARP2O94887 1054 aaPredicted RBP16.59■□□□□ 0.25
GGA3-208ENST00000579743 HMGCRP04035 888 aa16.59■□□□□ 0.25
GGA3-208ENST00000579743 PDE6AP16499 860 aa16.59■□□□□ 0.25
GGA3-208ENST00000579743 MAPK4P31152 587 aa16.59■□□□□ 0.25
GGA3-208ENST00000579743 HERVK_113P62684 666 aa16.59■□□□□ 0.25
GGA3-208ENST00000579743 HABP4Q5JVS0 413 aaKnown RBP16.59■□□□□ 0.25
GGA3-208ENST00000579743 TATDN1Q6P1N9 297 aa16.59■□□□□ 0.25
GGA3-208ENST00000579743 TRMT44Q8IYL2 757 aaKnown RBP16.59■□□□□ 0.25
GGA3-208ENST00000579743 SOCS4Q8WXH5 440 aa16.59■□□□□ 0.25
GGA3-208ENST00000579743 P2RX7Q99572 595 aaKnown RBP16.59■□□□□ 0.25
GGA3-208ENST00000579743 NUDT12Q9BQG2 462 aa16.59■□□□□ 0.25
GGA3-208ENST00000579743 MCM9Q9NXL9 1143 aa16.59■□□□□ 0.25
GGA3-208ENST00000579743 USP17L15C9J2P7 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 USP17L13C9JLJ4 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 USP17L11C9JVI0 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 USP17L18D6R9N7 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 USP17L22D6RA61 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 USP17L17D6RBQ6 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 USP17L19D6RCP7 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 USP17L20D6RJB6 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
GGA3-208ENST00000579743 CCNA1P78396 465 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 USP17L24Q0WX57 530 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 ZSCAN25Q6NSZ9 544 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 DEFB118Q96PH6 123 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 MYO5AQ9Y4I1 1855 aaKnown RBP16.58■□□□□ 0.24
GGA3-208ENST00000579743 MYH1P12882 1939 aa16.58■□□□□ 0.24
GGA3-208ENST00000579743 CDK5RAP2Q96SN8 1893 aa16.57■□□□□ 0.24
GGA3-208ENST00000579743 ZNF532Q9HCE3 1301 aa16.57■□□□□ 0.24
GGA3-208ENST00000579743 SHISA4Q96DD7 197 aa16.57■□□□□ 0.24
GGA3-208ENST00000579743 RIOK1Q9BRS2 568 aaKnown RBP16.57■□□□□ 0.24
GGA3-208ENST00000579743 LRRCC1Q9C099 1032 aa16.57■□□□□ 0.24
GGA3-208ENST00000579743 HMX1Q9NP08 348 aaPredicted RBP16.57■□□□□ 0.24
GGA3-208ENST00000579743 PAG1Q9NWQ8 432 aa16.57■□□□□ 0.24
GGA3-208ENST00000579743 RPTORQ8N122 1335 aa16.56■□□□□ 0.24
GGA3-208ENST00000579743 MPHOSPH10O00566 681 aaKnown RBP16.56■□□□□ 0.24
GGA3-208ENST00000579743 ATP5JP18859 108 aa16.56■□□□□ 0.24
GGA3-208ENST00000579743 JAG1P78504 1218 aa16.56■□□□□ 0.24
GGA3-208ENST00000579743 ZYXQ15942 572 aaKnown RBP16.56■□□□□ 0.24
GGA3-208ENST00000579743 C12orf42Q96LP6 360 aa16.56■□□□□ 0.24
GGA3-208ENST00000579743 PAGR1Q9BTK6 254 aa16.56■□□□□ 0.24
GGA3-208ENST00000579743 KIAA1683Q9H0B3 1180 aa16.56■□□□□ 0.24
GGA3-208ENST00000579743 EMILIN3Q9NT22 766 aa16.56■□□□□ 0.24
GGA3-208ENST00000579743 SWAP70Q9UH65 585 aa16.56■□□□□ 0.24
GGA3-208ENST00000579743 SIPA1L1O43166 1804 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms